BAC Information

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BAC

Clone NameB6Ng01-205L07
Chromosome15 (Build37)
Map Location 42,791,626 - 42,792,773
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC432947, LOC100039268, LOC100039197, Angpt1
Downstream geneRspo2, LOC675960, Eif3s6, Ttc35, LOC100039288, Tmem74
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205L07.bB6Ng01-205L07.g
ACCGA025317GA025318
length1,2421,143
definitionB6Ng01-205L07.b B6Ng01-205L07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtattataaatagaaaatgaaaatattgagaaattatcttaca
cgaataaaatgtaagcacttaggtacaggttaactatatagtgagaagtt
attctgggttgattgtttcaaactacagtatgacaggattgttttagata
gggttttcaggtagcccaggatagcctggaactcaatgttgtaggttttt
ttaattaataattttatttatctacattccagacactgtctgcctcatgg
tcccttctcccacagttcttcatcacattcccccctctctttgcctctca
gagggtactatcacttgagattttgatcttagccattctgactggtataa
gatggaatctcagagttatttttgtatgcattcccctgatgactaaggac
ttaaacatttaagtgcttctttcccattcaagattcctctcttgagaatt
ctgtttagctctgtatccccctttaaaattgaattatttgtgtttttggt
gtctaacttcttgagttcttcataaattttggataaaaccactctgtcag
atggaggggtggtgtagatcctttcccaatctgtagggtgccattttgtt
ctattgctttactgaagcttttcagtttcatgaggtcccatttatcaatt
gttaatattagagcctgagccattggtgttctgcttaggaagttgtctcc
tgtaccaagtagttcaaggttgttccccactttctcttctatgagatttt
agtgtatccagttttatgttgaggtctttcacccacttagacttcagttt
ttgtgcaggctgatagatatggatctatttccatttttctacatgcagac
tgacagaccaacatgatttgttgaatatgcttttttttccccccattaaa
tagttttgccaaaaataaagtgcccatcggtgtgtgtgtgtttattttct
tgggacttgattcaaccttgatcacttgttctgtttccaatgccaatacc
atgcagtttttatcactattactttgggagtataagccgtgtagtcaggg
aatggtgataccttcattttttattgttattgtttcaaatatgtttttac
tgacatgagcttttttttttttttttccaatatgaaagttagaaaattcc
ccggcaaaggctctgtgaaaagaaatggtgtcgaaaattcgctaatgaaa
ttgccattgggaaaatttgatgaaatggctcatttttcgcta

gaattccattgcctagttactttttgaatttcgttacattggtgtacatc
tcagaaaccagacaagggcagtagctgacagctttatatattgctcctca
ggcagcagacagagaaacagacactgagcctggcattgtagaggaatttt
aacccagcaacatggctgctttggtaagggatcacataaaggcttatatg
atacatctggaatgcagacatgttctggattacagtagatctggttggaa
tatagacatgctcttactacacaccttttaatcaccaacagcaaaggcaa
gggttaatttgtagaaagaagcaaccatgtttgaatgtgacatctaattg
aggggcagacaaagtggtgaatcagagaaagatttgacagaatgagtcaa
agataggatatgaccaactctcacaagaacaagaaagaagaaagagaggc
tacttaagaacagcacagggagagacaatgagctagacacaggtgaagac
agaagaagccagaaaatgagaatgagccagaagtttagcaaatattgcca
tagttagtatgagacaagtagaacaattcaatcagcaacaagagaagcct
ggttgagtcagtggccttggaaggttagattgtatggaggctagatgcat
ccaagcctgtgcctgggaatagttaggacagagaaagaagtgccctgggc
tcagcctaagccgtatattcacatagcttgtgcatggctctcatctcaac
cctatttcctctcaagaaaataaaagtgaccatttacatgacatgaactt
ttgaaacctcaaaagccatcctcagtaacatacttcttccaaaagggcca
caccttctaatttcttccctaacagttccattccctggtgactaagcatt
cacatagatgagcctatggggccattctcattcaaacagccatgcctgtg
cttgagggactgtcttcatttcagaactgggcagttccaatacgtctttc
tgggtacatggccttatcagaatacagcttcacatggtgttggtgattta
ccacaaaggcctatactattcatgaattggggatcacaatgttatgtctc
agtagagtctaaggtagctattgtcaatctttacaaggaaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_42791626_42792773
seq2: B6Ng01-205L07.g_68_1210

seq1  GAATTCCATTGCCTAGTTACTTTTTGAATTTCGTTACATTGGTGTACATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTGCCTAGTTACTTTTTGAATTTCGTTACATTGGTGTACATC  50

seq1  TCAGAAACCAGACAAGGGCAGTAGCTGACAGCTTTATATATTGCTCCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAACCAGACAAGGGCAGTAGCTGACAGCTTTATATATTGCTCCTCA  100

seq1  GGCAGCAGACAGAGAAACAGACACTGAGCCTGGCATTGTAGAGGAATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCAGACAGAGAAACAGACACTGAGCCTGGCATTGTAGAGGAATTTT  150

seq1  AACCCAGCAACATGGCTGCTTTGGTAAGGGATCACATAAAGGCTTATATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGCAACATGGCTGCTTTGGTAAGGGATCACATAAAGGCTTATATG  200

seq1  ATACATCTGGAATGCAGACATGTTCTGGATTACAGTAGATCTGGTTGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATCTGGAATGCAGACATGTTCTGGATTACAGTAGATCTGGTTGGAA  250

seq1  TATAGACATGCTCTTACTACACACCTTTTAATCACCAACAGCAAAGGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGACATGCTCTTACTACACACCTTTTAATCACCAACAGCAAAGGCAA  300

seq1  GGGTTAATTTGTAGAAAGAAGCAACCATGTTTGAATGTGACATCTAATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAATTTGTAGAAAGAAGCAACCATGTTTGAATGTGACATCTAATTG  350

seq1  AGGGGCAGACAAAGTGGTGAATCAGAGAAAGATTTGACAGAATGAGTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCAGACAAAGTGGTGAATCAGAGAAAGATTTGACAGAATGAGTCAA  400

seq1  AGATAGGATATGACCAACTCTCACAAGAACAAGAAAGAAGAAAGAGAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGGATATGACCAACTCTCACAAGAACAAGAAAGAAGAAAGAGAGGC  450

seq1  TACTTAAGAACAGCACAGGGAGAGACAATGAGCTAGACACAGGTGAAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAAGAACAGCACAGGGAGAGACAATGAGCTAGACACAGGTGAAGAC  500

seq1  AGAAGAAGCCAGAAAATGAGAATGAGCCAGAAGTTTAGCAAATATTGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAGCCAGAAAATGAGAATGAGCCAGAAGTTTAGCAAATATTGCCA  550

seq1  TAGTTAGTATGAGACAAGTAGAACAATTCAATCAGCAACAAGAGAAGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAGTATGAGACAAGTAGAACAATTCAATCAGCAACAAGAGAAGCCT  600

seq1  GGTTGAGTCAGTGGCCTTGGAAGGTTAGATTGTATGGAGGCTAGATGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAGTCAGTGGCCTTGGAAGGTTAGATTGTATGGAGGCTAGATGCAT  650

seq1  CCAAGCCTGTGCCTGGGAATAGTTAGGACAGAGAAAGAAGTGCCCTGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCCTGTGCCTGGGAATAGTTAGGACAGAGAAAGAAGTGCCCTGGGC  700

seq1  TCAGCCTAAGCCGTATATTCACATAGCTTGTGCATGGCTCTCATCTCAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTAAGCCGTATATTCACATAGCTTGTGCATGGCTCTCATCTCAAC  750

seq1  CCTATTTCCTCTCAAGAAAATAAAAGTGACCATTTACATGACATGAACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTCCTCTCAAGAAAATAAAAGTGACCATTTACATGACATGAACTT  800

seq1  TTGAAACCTCAAAAGCCATCCTCAGTAACATACTTCTTCCAAAAGGGCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACCTCAAAAGCCATCCTCAGTAACATACTTCTTCCAAAAGGGCCA  850

seq1  CACCTTCTAA-TTCTTCCCTAACAGTTCCATTCCCTGGTGACTAAGCATT  899
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCTAATTTCTTCCCTAACAGTTCCATTCCCTGGTGACTAAGCATT  900

seq1  CACATAGATGAGCCTATGGGGCCATTCTCATTCAAACAGCCATGCCTGTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGATGAGCCTATGGGGCCATTCTCATTCAAACAGCCATGCCTGTG  950

seq1  CTTGAGGGACTGTCTTCATTTCAGAACTGGGCAG-TCCAATACGTCTTTC  998
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTTGAGGGACTGTCTTCATTTCAGAACTGGGCAGTTCCAATACGTCTTTC  1000

seq1  TGGGTACATGGCCTTATCAGGAATACAGCTTCACAT-GTGTT-GTGATTT  1046
      ||||||||||||||||||| |||||||||||||||| ||||| |||||||
seq2  TGGGTACATGGCCTTATCA-GAATACAGCTTCACATGGTGTTGGTGATTT  1049

seq1  ACCACAAAGG-CTATACTATTCAATGAAATGGGATCCACAATGTTTAGTG  1095
      |||||||||| ||||||||||| ||||| ||||   |||||||||  || 
seq2  ACCACAAAGGCCTATACTATTC-ATGAATTGGGGATCACAATGTTATGT-  1097

seq1  CTCAGTAAGAGTCCTAAGTTAAGCTATTTGTCCAATC-TTACAAAGGGGA  1144
      |||||| ||||| ||||| | ||||| |||| ||||| ||||||   |||
seq2  CTCAGT-AGAGT-CTAAGGT-AGCTA-TTGT-CAATCTTTACAA---GGA  1139

seq1  AATG  1148
      ||||
seq2  AATG  1143


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