BAC Information

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BAC

Clone NameB6Ng01-205N02
Chromosome15 (Build37)
Map Location 25,758,627 - 25,926,851
singlet/doubletdoublet
Overlap genePpia-ps15_175.1, 1810015C04Rik, Zfp622
Upstream geneLOC100040529, 9230109A22Rik, 4930445E18Rik, Basp1, EG432939, LOC100040583, Myo10, LOC100040602
Downstream geneAK162044, Fbxl7, LOC622531
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205N02.bB6Ng01-205N02.g
ACCGA025395GA025396
length2711,094
definitionB6Ng01-205N02.b B6Ng01-205N02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,758,627 - 25,758,903)(25,925,753 - 25,926,851)
sequence
caggcttttgtattgtccacctatgcttgcttatctctgtgatttgctta
ttggaagacataaatgaagccacctagcttctgccacttagtgccttggc
actaacatacccaggaacaccacatggattctagaatcgactcaatagca
agaggtcttctgggcgcttgtcctagtggacctggctagctgaaatgcac
catctccaaaactcaagcctctctctctctctctctctctctctctctct
ctctctctctctctctctcgt

gaattcccaaagttggcttaggataagtgggttctgatatttaaagacag
aatctaatgtggggattccaagcaatggggctcagagatctacgtgcatc
taagaactgtgcatatcagaactttgtaaacagtgatgtttgctacgttt
ttaggctctaggctttctgggacatcagaaaggagcaaattatcttcact
acctccatttggactttatttcccagaagagcagagaagacagttttgca
cagcacactatgagagttaaataacagcacattgtagtttcaaagcttaa
taacttcagctgtcagatttactcattgcaatctacttctattgggaaaa
actgccaaagggggctgggctacctgtagtaagtgcactacctcacacat
gcattgtgtcagacaagcctctcaactctaaggtgggtcctcttaatcat
ttcccttgcacaaatgagcaagcagaagtgaaatttaataatgttcatga
cgtgagattagaatgtgaaactacatatgccatgttaggcgccacagctc
cactaaggtactatttaatttctgagttatctccagataatttctgcatg
taatttataagattttttatagatattatcttctggaaaggttcatgatg
catactaagttactagaccaggaatattaattttttaagtcatggagtct
tggacttaagtgttctaagtatcctgagataatgggagtcccagaagtaa
gactcaagcttcccctggaaaggagtcagacggacagcacgaatgataac
ctgtcacccaagcgcccacgaaatccatgcatataagaatggtgtacctg
tgctgcccatccaccccagggctcggtattgctggagaactctgcccaca
gccttttgattccctagcaactgtcacagctcttggcagccaaatcgctg
tttgtagtatctcatcaggagcgatgacccactctggcacctgttttgag
aagagcaattatttaacactggttctttcagtcagagttataaccaaggc
ttccccaaagatcttgatggcaccaagccttagaattctagtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_25758627_25758903
seq2: B6Ng01-205N02.b_43_319

seq1  GAATTCCAGGCTTTTGTATTGTCCACCTATGCTTGCTTATCTCTGTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCTTTTGTATTGTCCACCTATGCTTGCTTATCTCTGTGATT  50

seq1  TGCTTATTGGAAGACATAAATGAAGCCACCTAGCTTCTGCCACTTAGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATTGGAAGACATAAATGAAGCCACCTAGCTTCTGCCACTTAGTGC  100

seq1  CTTGGCACTAACATACCCAGGAACACCACATGGATTCTAGAATCGACTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCACTAACATACCCAGGAACACCACATGGATTCTAGAATCGACTCA  150

seq1  ATAGCAAGAGGTCTTCTGGGCGCTTGTCCTAGTGGACCTGGCTAGCTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAAGAGGTCTTCTGGGCGCTTGTCCTAGTGGACCTGGCTAGCTGAA  200

seq1  ATGCACCATCTCCAAAACTCAAGCCTCTCTCTCTCTCTCTCTCTCTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACCATCTCCAAAACTCAAGCCTCTCTCTCTCTCTCTCTCTCTCTCT  250

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCGT  277
      |||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCGT  277


seq1: chr15_25925753_25926851
seq2: B6Ng01-205N02.g_64_1157 (reverse)

seq1  CTACTAGGATTCCTAAGGCTTGGTGCCATTCAAGATCTTTTGGGAAGCCT  50
      ||||||| ||| |||||||||||||||| ||||||||||| |||||||||
seq2  CTACTAGAATT-CTAAGGCTTGGTGCCA-TCAAGATCTTTGGGGAAGCCT  48

seq1  TTGGTTTATAACTCTGACTTGAAAG-ACCAGTGTTTAAATATTGCTCTTC  99
      |  | ||||||||||||| |||||| ||||||||| ||  ||||||||||
seq2  T--GGTTATAACTCTGAC-TGAAAGAACCAGTGTTAAATAATTGCTCTTC  95

seq1  TCAAAACAGGTGCCAGAGTGGGTCATCGCTCCTTGATGAGATACTACAAA  149
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCAAAACAGGTGCCAGAGTGGGTCATCGCTCC-TGATGAGATACTACAAA  144

seq1  CAGCGATTTGGCTTGCCAAGAGCTGTGACAGTTGCTA-GGAATCAAAAGG  198
      |||||||||||| |||||||||||||||||||||||| ||||||||||||
seq2  CAGCGATTTGGC-TGCCAAGAGCTGTGACAGTTGCTAGGGAATCAAAAGG  193

seq1  CTGTGGGCAGAGTTCTCCAGCAATACCGAGCCCTGGGGTGGATGGGCAGC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGCAGAGTTCTCCAGCAATACCGAGCCCTGGGGTGGATGGGCAGC  243

seq1  ACAGGTACACCATTCTTATATGCATGGATTTCGTGGGCGCTTGGGTGACA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTACACCATTCTTATATGCATGGATTTCGTGGGCGCTTGGGTGACA  293

seq1  GGTTATCATTCGTGCTGTCCGTCTGACTCCTTTCCAGGGGAAGCTTGAGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATCATTCGTGCTGTCCGTCTGACTCCTTTCCAGGGGAAGCTTGAGT  343

seq1  CTTACTTCTGGGACTCCCATTATCTCAGGATACTTAGAACACTTAAGTCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTCTGGGACTCCCATTATCTCAGGATACTTAGAACACTTAAGTCC  393

seq1  AAGACTCCATGACTTAAAAAATTAATATTCCTGGTCTAGTAACTTAGTAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTCCATGACTTAAAAAATTAATATTCCTGGTCTAGTAACTTAGTAT  443

seq1  GCATCATGAACCTTTCCAGAAGATAATATCTATAAAAAATCTTATAAATT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATGAACCTTTCCAGAAGATAATATCTATAAAAAATCTTATAAATT  493

seq1  ACATGCAGAAATTATCTGGAGATAACTCAGAAATTAAATAGTACCTTAGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCAGAAATTATCTGGAGATAACTCAGAAATTAAATAGTACCTTAGT  543

seq1  GGAGCTGTGGCGCCTAACATGGCATATGTAGTTTCACATTCTAATCTCAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGTGGCGCCTAACATGGCATATGTAGTTTCACATTCTAATCTCAC  593

seq1  GTCATGAACATTATTAAATTTCACTTCTGCTTGCTCATTTGTGCAAGGGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGAACATTATTAAATTTCACTTCTGCTTGCTCATTTGTGCAAGGGA  643

seq1  AATGATTAAGAGGACCCACCTTAGAGTTGAGAGGCTTGTCTGACACAATG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTAAGAGGACCCACCTTAGAGTTGAGAGGCTTGTCTGACACAATG  693

seq1  CATGTGTGAGGTAGTGCACTTACTACAGGTAGCCCAGCCCCCTTTGGCAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTGAGGTAGTGCACTTACTACAGGTAGCCCAGCCCCCTTTGGCAG  743

seq1  TTTTTCCCAATAGAAGTAGATTGCAATGAGTAAATCTGACAGCTGAAGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCCAATAGAAGTAGATTGCAATGAGTAAATCTGACAGCTGAAGTT  793

seq1  ATTAAGCTTTGAAACTACAATGTGCTGTTATTTAACTCTCATAGTGTGCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGCTTTGAAACTACAATGTGCTGTTATTTAACTCTCATAGTGTGCT  843

seq1  GTGCAAAACTGTCTTCTCTGCTCTTCTGGGAAATAAAGTCCAAATGGAGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAAACTGTCTTCTCTGCTCTTCTGGGAAATAAAGTCCAAATGGAGG  893

seq1  TAGTGAAGATAATTTGCTCCTTTCTGATGTCCCAGAAAGCCTAGAGCCTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAAGATAATTTGCTCCTTTCTGATGTCCCAGAAAGCCTAGAGCCTA  943

seq1  AAAACGTAGCAAACATCACTGTTTACAAAGTTCTGATATGCACAGTTCTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACGTAGCAAACATCACTGTTTACAAAGTTCTGATATGCACAGTTCTT  993

seq1  AGATGCACGTAGATCTCTGAGCCCCATTGCTTGGAATCCCCACATTAGAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCACGTAGATCTCTGAGCCCCATTGCTTGGAATCCCCACATTAGAT  1043

seq1  TCTGTCTTTAAATATCAGAACCCACTTATCCTAAGCCAACTTTGGGAATT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTTTAAATATCAGAACCCACTTATCCTAAGCCAACTTTGGGAATT  1093

seq1  C  1099
      |
seq2  C  1094


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