BAC Information

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BAC

Clone NameB6Ng01-206B05
Chromosome15 (Build37)
Map Location 22,466,975 - 22,468,165
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh12, LOC100040351
Downstream geneEG545091, Cdh18, LOC624863
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206B05.bB6Ng01-206B05.g
ACCGA025584GA025585
length1,1661,193
definitionB6Ng01-206B05.b B6Ng01-206B05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctgaaatgtgcttggcaaccacaacatctggatgaatatggag
taacagaatggaatattcttgctaataaattagagccatttatttttcac
aagcatgatactgacatgtagaaagatgtgttagaaaatactgtgtatat
gcaaaggaaatactaaatctctttagtctgtgtgctaattaaaaagcaac
aactactctacatggcttaaaactaataaaatcaaatagaagaaaaataa
tttgagaagagaaagaggatcccagtatctggatgggaaggtgagagttc
atcttatagtatatttgacatttaatagtataagtagaacttttcaggca
tttttttccaaaataatggaaaacacagtgttttaattacaaaagccttt
tatgtttttaattattaatatgcaattactatgattgttatgcagaaact
tgatagtaatgcaaaagattaaaactgcaaacttacatatgatattttga
aaaggggagtggaaaatgtaatcaaaataaaatggggttgcgtcaggatt
agttcatggatgctcctgctgggatttgagtttggtacctaatacccatt
ttgggcaggaaacaaatacctttcactccagaccaaggatatctgataac
atattcaggtctccgcaggcctttgaacttatgttcacataaccacacat
agaaacacactcaggcaaaccatttctttaataaaaataaatcttcaaat
ataaatgaacaaaaaatgaaaataagctagcagttacagcagatgtcttt
aatcccagcacaaccaaagcagacacaggtagttctgtacgtgttcaagg
actgcctgctatatatagcaatttgtcagctcagttaaagagtgagaccc
tgtttcaaaacttaaggaacaagtgagcaaaatattaataatataaaagt
agatgagagaatgtagttgagatgagtattaagctcataggcttttatga
agaaatgtcactgaagtaaaaacttaaattacaaatagcatataaagcac
aaggaacagcactcagcaaatatgaatgataaaaactggtagggaaattt
tatattattgtctagcctgtctatagatcaaatgtcatggaaagagtaga
cttcaaactggctaac
gaattcctgatctttccaagacttttatggtgaatgggtgttgaattttg
tcaaatgcttttctctccatctaacgagatgatcatgtggtttttgtctt
tcagtttgtttatataatggattacgttgatagatttccgtatattaaac
caaccctgcatccctgatataaagcctacttggtcagaaaggatgattgt
tttcatgtgttcttggatttggttagcaagacccttatttaaggattttt
gcatcgatattcataagagaaattggtctgaagttctctatctttgttat
atctttctgtggtttaggtatcagagtaattgtgacttcatagaatgagt
tgggtagagtaccttctacttctgttttgtggaatagtttgtgcagaact
ggaaatagatcttcttggaaggtctgatagaactgtgcactaaacccatc
tggtcttgggtttttttggttgggagactattaatgaatgcttgtatttc
tttaggggatatgggactgtttagattgttaccttgatcctgatttaact
ttggtacctggtgtctgtctagaaatttgtctatttcatccaggttttcc
agttttgttgagtatagccttttgtagaaggatctgatggtgttttggat
ttctttaggatctgttttatgtctctcttttcatttctgattttgttaat
taggatgctgtccctgtgccctctagtgagtctgtctaagggtttatcta
tcttgttgattttctcaaagaaccagctcctcgtttggttgattctttga
atagttcttcctatttccacatggttgatttcacccctgagtttgattat
ttcctgccatttactcctcttgtgtgaatctgcttccttttttcctagag
cttttagtgtgttgtcaagctgctagtgtgtgctctctctaggttctttt
tggaggcaatcagagctatgattttccctcttagaaatgcttcatctgtc
ccatagttgggtatgttgtggaatcatttcaattaaacttgaagtcttaa
ttccttcttattcctccttgacaagtacattgagaagttgtggtcaagtg
tccacgtgcatgtgcctgtccattactaagtgccattaccgataccttag
actatgcgtgcctgatagtagtcctgactatcaattgtctatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_22466975_22468165
seq2: B6Ng01-206B05.b_47_1212 (reverse)

seq1  GTTATGCCAGTTTTTGGAGTCTTAACTCTTTTCATGACATTTTGATCTAT  50
      |||| |||||  |||| |||||  ||||||| ||||||| ||||||||| 
seq2  GTTA-GCCAG--TTTGAAGTCT--ACTCTTTCCATGACA-TTTGATCTA-  43

seq1  TAGACAGGGCTTAGACAATTAATATAAAATTTCCCTTACCAGTTTTTATC  100
      ||||||||   ||||||| |||||||||||||||| ||||||||||||||
seq2  TAGACAGG--CTAGACAA-TAATATAAAATTTCCC-TACCAGTTTTTATC  89

seq1  ATTTCCAATTATTTTGCTGAGTGCCTGTTTCCTTGTGCTTTATTATGCTA  150
      |||  ||  || ||||||||||| ||| |||||||||||||| |||||||
seq2  ATT--CA--TA-TTTGCTGAGTG-CTG-TTCCTTGTGCTTTA-TATGCTA  131

seq1  TTTTGTAATTTAAGTTTTTTACTTCAGTGACATTTTCTTCATTAAAAGCC  200
       ||||||||||||| ||||||||||||||||| |||||||| ||||||||
seq2  -TTTGTAATTTAAG-TTTTTACTTCAGTGACA-TTTCTTCA-TAAAAGCC  177

seq1  TATGAGCTTAATACTCATCTCAACTACATTCTCTCATCTTACTTTTATAT  250
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TATGAGCTTAATACTCATCTCAACTACATTCTCTCATC-TACTTTTATAT  226

seq1  TATTTAATATTTTGCTCACTTGTTCCTTAAGTTTTGAAACAGGGTCTCAC  300
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TA-TTAATATTTTGCTCACTTGTTCCTTAAGTTTTGAAACAGGGTCTCAC  275

seq1  TCTTTAACTGAGCTGACAAATTGCTATATATAGCAGGCAGTCCTTGAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAACTGAGCTGACAAATTGCTATATATAGCAGGCAGTCCTTGAACA  325

seq1  CGTACAGAACTACCTGTGTCTGCTTTGGTTGTGCTGGGATTAAAGACATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACAGAACTACCTGTGTCTGCTTTGGTTGTGCTGGGATTAAAGACATC  375

seq1  TGCTGTAACTGCTAGCTTATTTTCATTTTTTGTTCATTTATATTTGAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTAACTGCTAGCTTATTTTCATTTTTTGTTCATTTATATTTGAAGA  425

seq1  TTTATTTTTATTAAAGAAATGGTTTGCCTGAGTGTGTTTCTATGTGTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTTATTAAAGAAATGGTTTGCCTGAGTGTGTTTCTATGTGTGGT  475

seq1  TATGTGAACATAAGTTCAAAGGCCTGCGGAGACCTGAATATGTTATCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGAACATAAGTTCAAAGGCCTGCGGAGACCTGAATATGTTATCAGA  525

seq1  TATCCTTGGTCTGGAGTGAAAGGTATTTGTTTCCTGCCCAAAATGGGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTTGGTCTGGAGTGAAAGGTATTTGTTTCCTGCCCAAAATGGGTAT  575

seq1  TAGGTACCAAACTCAAATCCCAGCAGGAGCATCCATGAACTAATCCTGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTACCAAACTCAAATCCCAGCAGGAGCATCCATGAACTAATCCTGAC  625

seq1  GCAACCCCATTTTATTTTGATTACATTTTCCACTCCCCTTTTCAAAATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCCCATTTTATTTTGATTACATTTTCCACTCCCCTTTTCAAAATAT  675

seq1  CATATGTAAGTTTGCAGTTTTAATCTTTTGCATTACTATCAAGTTTCTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTAAGTTTGCAGTTTTAATCTTTTGCATTACTATCAAGTTTCTGC  725

seq1  ATAACAATCATAGTAATTGCATATTAATAATTAAAAACATAAAAGGCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAATCATAGTAATTGCATATTAATAATTAAAAACATAAAAGGCTTT  775

seq1  TGTAATTAAAACACTGTGTTTTCCATTATTTTGGAAAAAAATGCCTGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTAAAACACTGTGTTTTCCATTATTTTGGAAAAAAATGCCTGAAA  825

seq1  AGTTCTACTTATACTATTAAATGTCAAATATACTATAAGATGAACTCTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTACTTATACTATTAAATGTCAAATATACTATAAGATGAACTCTCA  875

seq1  CCTTCCCATCCAGATACTGGGATCCTCTTTCTCTTCTCAAATTATTTTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCATCCAGATACTGGGATCCTCTTTCTCTTCTCAAATTATTTTTC  925

seq1  TTCTATTTGATTTTATTAGTTTTAAGCCATGTAGAGTAGTTGTTGCTTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTTGATTTTATTAGTTTTAAGCCATGTAGAGTAGTTGTTGCTTTT  975

seq1  TAATTAGCACACAGACTAAAGAGATTTAGTATTTCCTTTGCATATACACA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAGCACACAGACTAAAGAGATTTAGTATTTCCTTTGCATATACACA  1025

seq1  GTATTTTCTAACACATCTTTCTACATGTCAGTATCATGCTTGTGAAAAAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTCTAACACATCTTTCTACATGTCAGTATCATGCTTGTGAAAAAT  1075

seq1  AAATGGCTCTAATTTATTAGCAAGAATATTCCATTCTGTTACTCCATATT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGCTCTAATTTATTAGCAAGAATATTCCATTCTGTTACTCCATATT  1125

seq1  CATCCAGATGTTGTGGTTGCCAAGCACATTTCAGGGAATTC  1191
      |||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAGATGTTGTGGTTGCCAAGCACATTTCAGGGAATTC  1166