BAC Information

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BAC

Clone NameB6Ng01-206P21
Chromosome15 (Build37)
Map Location 6,230,388 - 6,372,507
singlet/doubletdoublet
Overlap geneDab2
Upstream geneLOC100039322, LOC100039308, LOC666291, LOC666319, LOC100039358, LOC666323
Downstream geneC9, LOC100039396, LOC100039412, Fyb, LOC100039453, EG665511, 4921505C17Rik, Osmr, Lifr, Egflam
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206P21.bB6Ng01-206P21.g
ACCGA026262GA026263
length312779
definitionB6Ng01-206P21.b B6Ng01-206P21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,230,388 - 6,230,699)(6,371,739 - 6,372,507)
sequence
ttaaccatcctgcttctctgagatgtatttggaatgtgaagatttcttct
tcactgccatggaactgtgtgaatgtgtgggcgtgagcacatctaagtta
aaaaaaaaaaagtattgggcctttagagtcaataaattaaccaaaaacct
ccatgatgagttttctagatgtttgaacttttaaagtttccgtctaaagt
aggtggtgtaatctgatcttaagtgtaggagtgcatgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgcctgtataaacatgactttgtgtgtgtgt
gtgggggggggg

gaattccaggacagtcagggctatacagagaaagcctgtctcaaaaaaca
aatacaaaaataaaaacaaaacaaaaaaacccaaacacttctactctcaa
cagagaaccagttctcaggtgtattatgctttagagcttacctgttgccc
tgtttttatagcaaaaaattgatgctggccttcacctccacacacataac
caaatgctctgttgtctgtcacatcacgagcaatgaaggaaatcttattt
actggatgttcatgttcaattaccttaaaagggaacatagaagagcaata
gtgaaaaataaagaatggacttgttggctatcacagttggcgatcagaaa
caaatgtgaagggaaatacaaagagtttaaagcttttggttggttggttg
ttttttcaagacagggtttctctgtgtagccctggctgtcctggcattca
ctctgtagaccaggctggcctcagactcagaaatccacctgcctctgcct
cctgagtgctgggattaaaggcgtgctccaccaatgcccggtgagtttaa
agcttttgaataaagactttttagtcttgggttcaaggctacatctagat
ttctttttgctagaaaaggctccaaaaggaaaggataaatagaaaaacaa
taagtagaaaaaacatccttttctaaaaaaataagtacttgactcttctc
tctctatccaaaagatacaaatgccacctaccaggaaggattgaggggat
cttcaactggtttgatgagagtttaagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_6230388_6230699
seq2: B6Ng01-206P21.b_53_364

seq1  TTAACCATCCTGCTTCTCTGAGATGTATTTGGAATGTGAAGATTTCTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCATCCTGCTTCTCTGAGATGTATTTGGAATGTGAAGATTTCTTCT  50

seq1  TCACTGCCATGGAACTGTGTGAATGTGTGGGCGTGAGCACATCTAAGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGCCATGGAACTGTGTGAATGTGTGGGCGTGAGCACATCTAAGTTA  100

seq1  AAAAAAAAAAAGTATTGGGCCTTTAGAGTCAATAAATTAACCAAAAACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAGTATTGGGCCTTTAGAGTCAATAAATTAACCAAAAACCT  150

seq1  CCATGATGAGTTTTCTAGATGTTTGAACTTTTAAAGTTTCCGTCTAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGATGAGTTTTCTAGATGTTTGAACTTTTAAAGTTTCCGTCTAAAGT  200

seq1  AGGTGGTGTAATCTGATCTTAAGTGTAGGAGTGCATGTGTGTGTGTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTGTAATCTGATCTTAAGTGTAGGAGTGCATGTGTGTGTGTGTGT  250

seq1  GTGTGTGTGTGTGTGTGTGTGCCTGTATAAGCATGACTTTGTGTGTGTGT  300
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGCCTGTATAAACATGACTTTGTGTGTGTGT  300

seq1  GTGGGGGGGGGG  312
      ||||||||||||
seq2  GTGGGGGGGGGG  312


seq1: chr15_6371739_6372507
seq2: B6Ng01-206P21.g_66_844 (reverse)

seq1  CTCTT-AACTCTCA-CCAACCA-TTGAAGCTCCCCTCAGTCCTTCCTTGT  47
      ||||| |||||||| | ||||| |||||| |||||||| |||||||| ||
seq2  CTCTTAAACTCTCATCAAACCAGTTGAAGATCCCCTCAATCCTTCCTGGT  50

seq1  AGGTGGCATTT-TATCTTTTGGATAGAGAGAG-AGAGTCAAGTACTTATA  95
      ||||||||||| |||||||||||||||||||| |||||||||||||||| 
seq2  AGGTGGCATTTGTATCTTTTGGATAGAGAGAGAAGAGTCAAGTACTTATT  100

seq1  TTTTTAG-AAAGGATG-TTTTTCTACTT-TTG-TTTTCTATTTATCC-TT  140
      ||||||| |||||||| ||||||||||| ||| |||||||||||||| ||
seq2  TTTTTAGAAAAGGATGTTTTTTCTACTTATTGTTTTTCTATTTATCCTTT  150

seq1  CCTTTTGGAGCCTTTTCTAGCAAAAAGAAATCTAGATGTAGCCTTGAACC  190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTGGAGCCTTTTCTAGCAAAAAGAAATCTAGATGTAGCCTTGAACC  200

seq1  CAAGACTAAAAAGTCTTTATTCAAAAGCTTTAAACTCACCGGGCATTGGT  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACTAAAAAGTCTTTATTCAAAAGCTTTAAACTCACCGGGCATTGGT  250

seq1  GGAGCACGCCTTTAATCCCAGCACTCAGGAGGCAGAGGCAGGTGGATTTC  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCACGCCTTTAATCCCAGCACTCAGGAGGCAGAGGCAGGTGGATTTC  300

seq1  TGAGTCTGAGGCCAGCCTGGTCTACAGAGTGAATGCCAGGACAGCCAGGG  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTGAGGCCAGCCTGGTCTACAGAGTGAATGCCAGGACAGCCAGGG  350

seq1  CTACACAGAGAAACCCTGTCTTGAAAAAACAACCAACCAACCAAAAGCTT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACAGAGAAACCCTGTCTTGAAAAAACAACCAACCAACCAAAAGCTT  400

seq1  TAAACTCTTTGTATTTCCCTTCACATTTGTTTCTGATCGCCAACTGTGAT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCTTTGTATTTCCCTTCACATTTGTTTCTGATCGCCAACTGTGAT  450

seq1  AGCCAACAAGTCCATTCTTTATTTTTCACTATTGCTCTTCTATGTTCCCT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAACAAGTCCATTCTTTATTTTTCACTATTGCTCTTCTATGTTCCCT  500

seq1  TTTAAGGTAATTGAACATGAACATCCAGTAAATAAGATTTCCTTCATTGC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGTAATTGAACATGAACATCCAGTAAATAAGATTTCCTTCATTGC  550

seq1  TCGTGATGTGACAGACAACAGAGCATTTGGTTATGTGTGTGGAGGTGAAG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGATGTGACAGACAACAGAGCATTTGGTTATGTGTGTGGAGGTGAAG  600

seq1  GCCAGCATCAATTTTTTGCTATAAAAACAGGGCAACAGGTAAGCTCTAAA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCATCAATTTTTTGCTATAAAAACAGGGCAACAGGTAAGCTCTAAA  650

seq1  GCATAATACACCTGAGAACTGGTTCTCTGTTGAGAGTAGAAGTGTTTGGG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAATACACCTGAGAACTGGTTCTCTGTTGAGAGTAGAAGTGTTTGGG  700

seq1  TTTTTTTGTTTTGTTTTTATTTTTGTATTTGTTTTTTGAGACAGGCTTTC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGTTTTGTTTTTATTTTTGTATTTGTTTTTTGAGACAGGCTTTC  750

seq1  TCTGTATAGCCCTGACTGTCCTGGAATTC  769
      |||||||||||||||||||||||||||||
seq2  TCTGTATAGCCCTGACTGTCCTGGAATTC  779


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