BAC Information

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BAC

Clone NameB6Ng01-207E10
Chromosome15 (Build37)
Map Location 27,850,289 - 27,971,209
singlet/doubletdoublet
Overlap geneTrio
Upstream geneLOC625311, Ank, BC087945, LOC100040622, BC052328
Downstream geneLOC667126, Dnahc5, EG382974, LOC100040675, LOC100040689, LOC100040702, LOC667153
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207E10.bB6Ng01-207E10.g
ACCGA026476GA026477
length1,0801,053
definitionB6Ng01-207E10.b B6Ng01-207E10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,970,143 - 27,971,209)(27,850,289 - 27,851,342)
sequence
gaattcaggttgctgagcctgccccagcctctgctttcttgtcagtccac
ccccaccccatccccggcagggaggggacagagcactccttctgcaggtg
tctctgcctgcctcccctcttgtgaatcttgcaggcagctcagcctctgg
acctttggccgaggcttgccagcctcgggacagctgccaagcagggggtc
tggaagtaagttacataaatctggatgccctcgttcataaggtaccagta
agaaatgtctccagaaaaaactgctccttcatgtagcctcaagacttgag
agactgcatagcctacattacatgaaagttgggcacatgattgtctacca
gctggggtgtatgggcatgtggacatcgtttttggcaactatcacgcctt
ccttaaaaaattgttcatagatgccgattcttcttaggcatcaacatcga
ggttgctgaagggtccgaggtggaggctgggaagagaagcttacccttta
agtgactccaccaaactcttggaaggctaatgctagctgcaggctgcaga
agaacaagggtggctgactccgtttgcacacagccacatatgcttacctc
ctaatgcgtagtagttttactgatctgcagcagcttgtgttctcattcag
ggctgcctctgtctttgcacctaggacaccgggcatgaagctcattatcc
cccctcttctcagcttgttgcctagatggaagcacatctccctaggatga
ggtgcagttccagaggtgcttgaagacgtctctaccaacaggctattacc
cacccctctctccggacatcagaatcactcgatcaataggcacaacatgg
ggttcctttctcaaatatagtcattaaagaattttaaacgcccaatagtt
cacgaatcacacgtaaacataattaagcccccaaggtgctgaaaacccca
tttggaactgtgtgaccagaaaggtggcatctctctttgttaagttttct
agttagttattgggcaaaatcaaggggggtgaattaggcttaataacaat
ttaacctctaagaatcttcaattttcagtt
gaattcactgctctaactttattctggctggtggagaggacagagcccag
tgtaaggccaaactagattacatgctcaggactgcactgtggtatgtgaa
accgagaggagaaatctgggagaaagagtcctcagactaagtatcagagt
cagtggcccaagcttccagcttttcccaagcctcatacatgaaacacaag
ttccctgtggcccttctaaaaaaaaaaaaaaaaaaaaaaaatcaagcatc
tgagccaggcaggtggcaatagccacctttaatcccagcattcctgaggc
agaggcaggcagcaaggaccaaagccctgagaggacttctggcatgaccc
agccagggaataacagacttgagccagagctcaggtcttcaggtcaccag
gccacttcactttctagtgcaccaacttttctgtgtgaaccgccatggct
gtgtgctggcaacccaccagactgagaagcagttctggtttctagatggc
agatacccgagccagagggctacaatttcaccccagtgcctccagagctc
ttgaataaattcaagctaatctcagcagctccccatccatcgaggtaact
cagtaccactttaattcagtaccgctcgtggtaaagatggcggtacagct
aaggcagtggcgtcaggctggtgacagcctgtagccaatgcagatgatga
gaaggctcataagctgggggatcccagtgagaatggagtgacctgcagct
ataggtcaaacctaaagatgtctgacaagagaaatcctttttcttactgt
tcagggtcgcgaacagacacgtccaacaagccaatgttcaccccaggttc
ttgtctatgccctagagaatacttatgaagtcagagtgtgcagctgttaa
aaaataatttttcttagaaattaaaaataaacagctttttgctatacctc
catgggttctggactacagtacagaaagggccagatacctaagactttcc
tgggctcgtgattaaaaggcttagtctggtcatggtcttctcctggagcc
att
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_27970143_27971209
seq2: B6Ng01-207E10.b_46_1125 (reverse)

seq1  AACTGAAAATT-AAGAATCTTAGAGG-TAAAT--GTATTA--GCTTATTC  44
      ||||||||||| |||| ||||||||| |||||   |||||   || ||||
seq2  AACTGAAAATTGAAGATTCTTAGAGGTTAAATTGTTATTAAGCCTAATTC  50

seq1  ACCCCCC-TGATTTTG-CCAAT-ACTAACTAGAAAACTTAAC-AAGAGAG  90
      ||||||| |||||||| ||||| ||||||||||||||||||| |||||||
seq2  ACCCCCCTTGATTTTGCCCAATAACTAACTAGAAAACTTAACAAAGAGAG  100

seq1  ATGCCACCTTTCTGGTCACACAGTTCCAAATGGGGTTTTCAGCACCTTGG  140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCACCTTTCTGGTCACACAGTTCCAAATGGGGTTTTCAGCACCTTGG  150

seq1  GGGCTTAATTATGTTTACGTGTGATTCGTGAACTATTGGGCGTTT-AAAT  189
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGGCTTAATTATGTTTACGTGTGATTCGTGAACTATTGGGCGTTTAAAAT  200

seq1  TCTTTAATGACTATATTTGAGAAAGGAA-CCCATGTTGTGCCTATTGATC  238
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TCTTTAATGACTATATTTGAGAAAGGAACCCCATGTTGTGCCTATTGATC  250

seq1  GAGTGATTCTGATGTCCGGAGAGAGGGGTGGGTAATAGCCTGTTGGTAGA  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGATTCTGATGTCCGGAGAGAGGGGTGGGTAATAGCCTGTTGGTAGA  300

seq1  GACGTCTTCAAGCACCTCTGGAACTGCACCTCATCCTAGGGAGATGTGCT  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTCTTCAAGCACCTCTGGAACTGCACCTCATCCTAGGGAGATGTGCT  350

seq1  TCCATCTAGGCAACAAGCTGAGAAGAGGGGGGATAATGAGCTTCATGCCC  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCTAGGCAACAAGCTGAGAAGAGGGGGGATAATGAGCTTCATGCCC  400

seq1  GGTGTCCTAGGTGCAAAGACAGAGGCAGCCCTGAATGAGAACACAAGCTG  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCCTAGGTGCAAAGACAGAGGCAGCCCTGAATGAGAACACAAGCTG  450

seq1  CTGCAGATCAGTAAAACTACTACGCATTAGGAGGTAAGCATATGTGGCTG  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGATCAGTAAAACTACTACGCATTAGGAGGTAAGCATATGTGGCTG  500

seq1  TGTGCAAACGGAGTCAGCCACCCTTGTTCTTCTGCAGCCTGCAGCTAGCA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAAACGGAGTCAGCCACCCTTGTTCTTCTGCAGCCTGCAGCTAGCA  550

seq1  TTAGCCTTCCAAGAGTTTGGTGGAGTCACTTAAAGGGTAAGCTTCTCTTC  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCTTCCAAGAGTTTGGTGGAGTCACTTAAAGGGTAAGCTTCTCTTC  600

seq1  CCAGCCTCCACCTCGGACCCTTCAGCAACCTCGATGTTGATGCCTAAGAA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTCCACCTCGGACCCTTCAGCAACCTCGATGTTGATGCCTAAGAA  650

seq1  GAATCGGCATCTATGAACAATTTTTTAAGGAAGGCGTGATAGTTGCCAAA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCGGCATCTATGAACAATTTTTTAAGGAAGGCGTGATAGTTGCCAAA  700

seq1  AACGATGTCCACATGCCCATACACCCCAGCTGGTAGACAATCATGTGCCC  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGATGTCCACATGCCCATACACCCCAGCTGGTAGACAATCATGTGCCC  750

seq1  AACTTTCATGTAATGTAGGCTATGCAGTCTCTCAAGTCTTGAGGCTACAT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCATGTAATGTAGGCTATGCAGTCTCTCAAGTCTTGAGGCTACAT  800

seq1  GAAGGAGCAGTTTTTTCTGGAGACATTTCTTACTGGTACCTTATGAACGA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGCAGTTTTTTCTGGAGACATTTCTTACTGGTACCTTATGAACGA  850

seq1  GGGCATCCAGATTTATGTAACTTACTTCCAGACCCCCTGCTTGGCAGCTG  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATCCAGATTTATGTAACTTACTTCCAGACCCCCTGCTTGGCAGCTG  900

seq1  TCCCGAGGCTGGCAAGCCTCGGCCAAAGGTCCAGAGGCTGAGCTGCCTGC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGAGGCTGGCAAGCCTCGGCCAAAGGTCCAGAGGCTGAGCTGCCTGC  950

seq1  AAGATTCACAAGAGGGGAGGCAGGCAGAGACACCTGCAGAAGGAGTGCTC  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCACAAGAGGGGAGGCAGGCAGAGACACCTGCAGAAGGAGTGCTC  1000

seq1  TGTCCCCTCCCTGCCGGGGATGGGGTGGGGGTGGACTGACAAGAAAGCAG  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCTCCCTGCCGGGGATGGGGTGGGGGTGGACTGACAAGAAAGCAG  1050

seq1  AGGCTGGGGCAGGCTCAGCAA-CTGAATTC  1067
      ||||||||||||||||||||| ||||||||
seq2  AGGCTGGGGCAGGCTCAGCAACCTGAATTC  1080

seq1: chr15_27850289_27851342
seq2: B6Ng01-207E10.g_67_1119

seq1  GAATTCACTGCTCTAACTTTATTCTGGCTGGTGGAGAGGACAGAGCCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGCTCTAACTTTATTCTGGCTGGTGGAGAGGACAGAGCCCAG  50

seq1  TGTAAGGCCAAACTAGATTACATGCTCAGGACTGCACTGTGGTATGTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGGCCAAACTAGATTACATGCTCAGGACTGCACTGTGGTATGTGAA  100

seq1  ACCGAGAGGAGAAATCTGGGAGAAAGAGTCCTCAGACTAAGTATCAGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAGAGGAGAAATCTGGGAGAAAGAGTCCTCAGACTAAGTATCAGAGT  150

seq1  CAGTGGCCCAAGCTTCCAGCTTTTCCCAAGCCTCATACATGAAACACAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGCCCAAGCTTCCAGCTTTTCCCAAGCCTCATACATGAAACACAAG  200

seq1  TTCCCTGTGGCCCTTCTAAAAAAAAAAAAAAAAAAAAAAAATCAAGCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGTGGCCCTTCTAAAAAAAAAAAAAAAAAAAAAAAATCAAGCATC  250

seq1  TGAGCCAGGCAGGTGGCAATAGCCACCTTTAATCCCAGCATTCCTGAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCAGGCAGGTGGCAATAGCCACCTTTAATCCCAGCATTCCTGAGGC  300

seq1  AGAGGCAGGCAGCAAGGACCAAAGCCCTGAGAGGACTTCTGGCATGACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGGCAGCAAGGACCAAAGCCCTGAGAGGACTTCTGGCATGACCC  350

seq1  AGCCAGGGAATAACAGACTTGAGCCAGAGCTCAGGTCTTCAGGTCACCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGGAATAACAGACTTGAGCCAGAGCTCAGGTCTTCAGGTCACCAG  400

seq1  GCCACTTCACTTTCTAGTGCACCAACTTTTCTGTGTGAACCGCCATGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTTCACTTTCTAGTGCACCAACTTTTCTGTGTGAACCGCCATGGCT  450

seq1  GTGTGCTGGCAACCCACCAGACTGAGAAGCAGTTCTGGTTTCTAGATGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCTGGCAACCCACCAGACTGAGAAGCAGTTCTGGTTTCTAGATGGC  500

seq1  AGATACCCGAGCCAGAGGGCTACAATTTCACCCCAGTGCCTCCAGAGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACCCGAGCCAGAGGGCTACAATTTCACCCCAGTGCCTCCAGAGCTC  550

seq1  TTGAATAAATTCAAGCTAATCTCAGCAGCTCCCCATCCATCGAGGTAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATAAATTCAAGCTAATCTCAGCAGCTCCCCATCCATCGAGGTAACT  600

seq1  CAGTACCACTTTAATTCAGTACCGCTCGTGGTAAAGATGGCGGTACAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACCACTTTAATTCAGTACCGCTCGTGGTAAAGATGGCGGTACAGCT  650

seq1  AAGGCAGTGGCGTCAGGCTGGTGACAGCCTGTAGCCAATGCAGATGATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGTGGCGTCAGGCTGGTGACAGCCTGTAGCCAATGCAGATGATGA  700

seq1  GAAGGCTCATAAGCTGGGGGATCCCAGTGAGAATGGAGTGACCTGCAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTCATAAGCTGGGGGATCCCAGTGAGAATGGAGTGACCTGCAGCT  750

seq1  ATAGGTCAAACCTAAAGATGTCTGACAAGAGAAATCCTTTT--CTACTGT  798
      |||||||||||||||||||||||||||||||||||||||||   ||||||
seq2  ATAGGTCAAACCTAAAGATGTCTGACAAGAGAAATCCTTTTTCTTACTGT  800

seq1  TCAGGGTCGCGAACAGACACGTCCAACAAGCCAATGTTCA-CCCAGGTTC  847
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCAGGGTCGCGAACAGACACGTCCAACAAGCCAATGTTCACCCCAGGTTC  850

seq1  TTGTCTATGCCCTAGAGAATACTTATGAAGTCAGAGTGTGCAGCTGTTTA  897
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTGTCTATGCCCTAGAGAATACTTATGAAGTCAGAGTGTGCAGCTGTTAA  900

seq1  AAAATAATTTTTCTTAGAAATTAAAAATAAACAGCTTTTTGCTATA-CTC  946
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAAATAATTTTTCTTAGAAATTAAAAATAAACAGCTTTTTGCTATACCTC  950

seq1  CATGGGTTCTGGACTACAGTACAGAAA-GGCCAGATACCTAAGAC-TTCC  994
      ||||||||||||||||||||||||||| ||||||||||||||||| ||||
seq2  CATGGGTTCTGGACTACAGTACAGAAAGGGCCAGATACCTAAGACTTTCC  1000

seq1  TTGGCTCGTGAATTAAAAGGCTTTAGGTTCTGGGTTCAATGGTCTTCTCC  1044
      | |||||||| |||||||||| ||||  |||||  || ||||||||||||
seq2  TGGGCTCGTG-ATTAAAAGGC-TTAG--TCTGG--TC-ATGGTCTTCTCC  1043

seq1  TGGAGGCATT  1054
      ||||| ||||
seq2  TGGAGCCATT  1053