BAC Information

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BAC

Clone NameB6Ng01-207N20
Chromosome15 (Build37)
Map Location 58,748,034 - 58,937,478
singlet/doubletdoublet
Overlap geneTatdn1, Ndufb9, Mtss1, LOC100040330
Upstream geneWdr67, BC030396, 9130401M01Rik, Zhx1, Atad2, LOC665244, 2410187C16Rik, Fbxo32, 8230402K04Rik, Anxa13, LOC100040231, D15Ertd621e, EG631797, Tmem65, EG546638, Trmt12, Rnf139
Downstream geneEG268809, LOC665565, Sqle, E430025E21Rik, Nsmce2, Trib1, LOC665602, EG632248, LOC665613, 4933412E24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207N20.bB6Ng01-207N20.g
ACCGA026900GA026901
length583933
definitionB6Ng01-207N20.b B6Ng01-207N20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,748,034 - 58,748,622)(58,936,557 - 58,937,478)
sequence
agatattaacaacacaagcttctttcctgccacttaatttttagaaaggg
atgcttcatttaccaggattacaaactttcacaatgccctttgttgttct
atgactttattaactaatgtttgggtttttaaatcactttttcagattct
gctgggctagaataagctgaagtaattttgttttagttaaagtgaggaca
gtttgcaagttagaaaacataaaaccttgaaagaaaagattaggaattac
tagtagtggcgagggacattgccagatgggcagagtccttgccaacatgc
acaaagccctgggctgaatctccagcactgcatgaaagcaagcgtggtag
ctcaggactgtgatttcagcacccgcaaggtgaagacacacatcacaagt
ttaaggtgatcttcaactacccaattagtttgaggacaaccaggcccata
tgaaacctgtttcaaaacaaaaaacaaaacaaaacaaaacaaaaaaaccc
caaaacacaagtactagccacctattccatagccactaaagcagtacata
tgccaacatccagtgtgtgggggaaggggggtg
gaattccataagcaagagcctcagaggaagtagatgaagaaatgcaggga
gtccctaatgctttggccattggtctgcttgcgttttcagcctggaggga
aatagactgagaggcttagctctggctaataaacttggaattgaagaatg
tcacttagttgcatgccattggccaagtcacctggattcatggagtgttg
tttctccaacgaacataataaaccagtaataactttctgtaaccacgctc
tgggccactgttgtagaacactgttgtctgggctaacacgcttgtaatct
tgaaaatggagaggctgtgattccatgtgcgaaacccacacaacatcagg
accgttaacactccctttagaaggagtaggggaaagggccctgtttccca
cctaagatttcagtcgctctatctttcctgctcccgctcaactctatgtg
atcttgggactcaagcttgccaaagttatgcaacgagtccttgggattca
aggactcattgaatcacctttgtgagcttcagtggatctgcttttaagtc
actcaccatccttctaagtaaaataataacaacaacaataataataataa
taataataagaagaagaagagagagagagagagagagagagagagagaga
gagaaagaaagaaagatagatagaaagaatgatagatttttagatagata
gattgatagattgaaagaaatatagaaagaaagacatcaactgatggttc
cttctctggggtgtcctgattaactcttgtggttgttgttgtttttatca
acttgacacaattcctggtccatctagggaaaagaaacttcagttgagaa
aaattcctccaccagatcggcaaagccggtgggggacattttctcacctg
atgaatgaataagataggtcccattctgctgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_58748034_58748622
seq2: B6Ng01-207N20.b_34_622

seq1  GAATTCAGATATTAACAACACAAGCTTCTTTCCTGCCACTTAATTTTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATATTAACAACACAAGCTTCTTTCCTGCCACTTAATTTTTAG  50

seq1  AAAGGGATGCTTCATTTACCAGGATTACAAACTTTCACAATGCCCTTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGATGCTTCATTTACCAGGATTACAAACTTTCACAATGCCCTTTGT  100

seq1  TGTTCTATGACTTTATTAACTAATGTTTGGGTTTTTAAATCACTTTTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTATGACTTTATTAACTAATGTTTGGGTTTTTAAATCACTTTTTCA  150

seq1  GATTCTGCTGGGCTAGAATAAGCTGAAGTAATTTTGTTTTAGTTAAAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGCTGGGCTAGAATAAGCTGAAGTAATTTTGTTTTAGTTAAAGTG  200

seq1  AGGACAGTTTGCAAGTTAGAAAACATAAAACCTTGAAAGAAAAGATTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGTTTGCAAGTTAGAAAACATAAAACCTTGAAAGAAAAGATTAGG  250

seq1  AATTACTAGTAGTGGCGAGGGACATTGCCAGATGGGCAGAGTCCTTGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTAGTAGTGGCGAGGGACATTGCCAGATGGGCAGAGTCCTTGCCA  300

seq1  ACATGCACAAAGCCCTGGGCTGAATCTCCAGCACTGCATGAAAGCAAGCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCACAAAGCCCTGGGCTGAATCTCCAGCACTGCATGAAAGCAAGCG  350

seq1  TGGTAGCTCAGGACTGTGATTTCAGCACCCGCAAGGTGAAGACACACATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGCTCAGGACTGTGATTTCAGCACCCGCAAGGTGAAGACACACATC  400

seq1  ACAAGTTTAAGGTGATCTTCAACTACCCAATTAGTTTGAGGACAACCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTTTAAGGTGATCTTCAACTACCCAATTAGTTTGAGGACAACCAGG  450

seq1  CCCATATGAAACCTGTTTCAAAACAAAAAACAAAACAAAACAAAACAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATATGAAACCTGTTTCAAAACAAAAAACAAAACAAAACAAAACAAAA  500

seq1  AAACCCCAAAACACAAGTACTAGCCACCTATTCCATAGCCACTAAAGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCCAAAACACAAGTACTAGCCACCTATTCCATAGCCACTAAAGCAG  550

seq1  TACATATGCCAACATCCAGTGTGTGGGGGAAGGGGGGTG  589
      |||||||||||||||||||||||||||||||||||||||
seq2  TACATATGCCAACATCCAGTGTGTGGGGGAAGGGGGGTG  589

seq1: chr15_58936557_58937478
seq2: B6Ng01-207N20.g_64_996 (reverse)

seq1  CACAGCAGATTGGGCCCTCTCTTATTCA-TCATCAGTGAAGAAAATGT-C  48
      ||||||||| |||| ||| ||||||||| |||||||   ||||||||| |
seq2  CACAGCAGAATGGGACCTATCTTATTCATTCATCAGGTGAGAAAATGTCC  50

seq1  CCCACCGGCTTTGCCGATCTGGTGGA-GAATTTTTCTCAACTGAAGTTTC  97
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCCACCGGCTTTGCCGATCTGGTGGAGGAATTTTTCTCAACTGAAGTTTC  100

seq1  CTTTCCCTAGATGGACCAGGAATTGTGTCAAGTTGATAAAAACAACAACA  147
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCTAGATGGACCAGGAATTGTGTCAAGTTGATAAAAACAACAACA  150

seq1  ACCACAAGAGTTAATCAGGACACCCCAGAGAAGGAACCATCAGTTGATGT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAAGAGTTAATCAGGACACCCCAGAGAAGGAACCATCAGTTGATGT  200

seq1  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT--------TTCT  239
      |||||||||| | ||||||||  ||| ||  ||| |||         |||
seq2  CTTTCTTTCTATATTTCTTTCAATCTATCAATCTATCTATCTAAAAATCT  250

seq1  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTCTCT  289
       || |||||||| ||| |||||||||||||||||||||||||||||||||
seq2  ATCATTCTTTCTATCTATCTTTCTTTCTTTCTCTCTCTCTCTCTCTCTCT  300

seq1  CTCTCTCTCTCTCTCTTCTTCTTCTTATTATTATTATTATTATTATTGTT  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTTCTTCTTCTTATTATTATTATTATTATTATTGTT  350

seq1  GTTGTTATTATTTTACTTAGAAGGATGGTGAGTGACTTAAAAGCAGATCC  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTATTATTTTACTTAGAAGGATGGTGAGTGACTTAAAAGCAGATCC  400

seq1  ACTGAAGCTCACAAAGGTGATTCAATGAGTCCTTGAATCCCAAGGACTCG  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGCTCACAAAGGTGATTCAATGAGTCCTTGAATCCCAAGGACTCG  450

seq1  TTGCATAACTTTGGCAAGCTTGAGTCCCAAGATCACATAGAGTTGAGCGG  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATAACTTTGGCAAGCTTGAGTCCCAAGATCACATAGAGTTGAGCGG  500

seq1  GAGCAGGAAAGATAGAGCGACTGAAATCTTAGGTGGGAAACAGGGCCCTT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGGAAAGATAGAGCGACTGAAATCTTAGGTGGGAAACAGGGCCCTT  550

seq1  TCCCCTACTCCTTCTAAAGGGAGTGTTAACGGTCCTGATGTTGTGTGGGT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTACTCCTTCTAAAGGGAGTGTTAACGGTCCTGATGTTGTGTGGGT  600

seq1  TTCGCACATGGAATCACAGCCTCTCCATTTTCAAGATTACAAGCGTGTTA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGCACATGGAATCACAGCCTCTCCATTTTCAAGATTACAAGCGTGTTA  650

seq1  GCCCAGACAACAGTGTTCTACAACAGTGGCCCAGAGCGTGGTTACAGAAA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGACAACAGTGTTCTACAACAGTGGCCCAGAGCGTGGTTACAGAAA  700

seq1  GTTATTACTGGTTTATTATGTTCGTTGGAGAAACAACACTCCATGAATCC  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTACTGGTTTATTATGTTCGTTGGAGAAACAACACTCCATGAATCC  750

seq1  AGGTGACTTGGCCAATGGCATGCAACTAAGTGACATTCTTCAATTCCAAG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGACTTGGCCAATGGCATGCAACTAAGTGACATTCTTCAATTCCAAG  800

seq1  TTTATTAGCCAGAGCTAAGCCTCTCAGTCTATTTCCCTCCAGGCTGAAAA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAGCCAGAGCTAAGCCTCTCAGTCTATTTCCCTCCAGGCTGAAAA  850

seq1  CGCAAGCAGACCAATGGCCAAAGCATTAGGGACTCCCTGCATTTCTTCAT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAAGCAGACCAATGGCCAAAGCATTAGGGACTCCCTGCATTTCTTCAT  900

seq1  CTACTTCCTCTGAGGCTCTTGCTTATGGAATTC  922
      |||||||||||||||||||||||||||||||||
seq2  CTACTTCCTCTGAGGCTCTTGCTTATGGAATTC  933