BAC Information

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BAC

Clone NameB6Ng01-209H12
Chromosome15 (Build37)
Map Location 62,506,653 - 62,507,581
singlet/doubletsinglet
Overlap genenone
Upstream geneMyc, Pvt1, LOC100040584, H2afy3
Downstream geneLOC100040430, Tsg101-ps, EG239502, EG432959
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209H12.bB6Ng01-209H12.g
ACCGA028078GA028079
length9391,150
definitionB6Ng01-209H12.b B6Ng01-209H12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatttattttttcttatactaaaggtatgcgatactataggaga
ttgtgaccattacagatgctagtcttagagaacacatgaaagtcttatcc
acagggacctcccacatctgaaggtatagaagatagcaagcctttacttt
tctatgttggcaccctgatggatcagtttgcattgagtcctaatctgcct
aagacccaggtgagaatgagatcagcatttgtccactgtgcttatttgtg
attgtgctggtgtgaatttgggtagaaaccagcttgcattgagttcatgt
tctcatcatttattctcttaggtttttgaacattgagcagtactttgttc
tgaactgtttcagatagataatttcttcctccattcactatatttcaact
tcccaatctagtgccaccagtcagccaaaggacaacaaggtccgataaca
caagcctcatatcaaataatatgactagagtaaataaagaaatgatcatg
ttagtcagaaagcaggggaggggtgattatatagatgaataaatattatc
ccagcagttagaacatggtaaaaataaagtatgtcagttttcaaagtaaa
ttgtggttttttctggtgcccatggagagaagacttgtttatatttttta
attgaaccctaagccccataaccaccatcactgtttgctattttttatcc
tatctttggtatttcttccacccagtattcacgctctgacactgatcacc
aaggtctatcacctataagatttttggattccatatcataagcacaactg
ctcttggctttgactaatggcaggcaccaagcaacccttccccattggcc
acataagccagaatccaagagacctaggacctctagtggttctattgcta
gtacaacataactgccccaggtgcccattcagatgtgtc
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaactcaggtgacaac
agatgctggtgaggatgtggagaaagagaaacactcctccattgttgttg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctccttggc
atatatccagaagatatcccaaccggtaagaaggacacatgttccactat
gttcatagcagccttatttataatagccagaagctggagagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctattaaaaaaatgaatttatgaaattcctaggcaaa
tggatggacctggagggcttcatcctgagcgaggtaacccaatcacaaag
gaactcgcacaatatgtactcactgataagtggatactagcccaaaactt
acgatacccaagatataagatacaccttgctaaacgcatgaaattcaaga
agaaggaagatcaaagtgtgtacactttaccccttcctagaaatgggaac
aaaacacccatggaaagagttacagagacaaaatttggagctgtgacaaa
aagatggaccatctattgattgccatatgcagggatccatcccataatca
gcttccaaatgctgacaccattgcacacactagcaaaattttgctgaaag
gacccagatatagctctctcttgtgagactatgcccggggcctagcaata
cagaagtggatgatcacagtcagcttattggatgggtcacacggccccaa
tgaggagctagagatattaccaggagctaaagggactgcaccctatagtg
acacatatgacttaccagtacccgagctctgttctctagctgcatatgca
tcaaaggattgctaggtgcatcacttgcaagaagcccaatgactggcacc
tgatgtacagtacatgtacgcagttaaaatgcggatgtgctgtgcttacg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_62506653_62507581
seq2: B6Ng01-209H12.b_40_975 (reverse)

seq1  ACATCTG-ATTGGCACCTGGGG-AATTATCT--GACTAGCAATAGAACCA  46
      ||||||| || ||||||||||| | |||| |   ||||||||||||||||
seq2  ACATCTGAATGGGCACCTGGGGCAGTTATGTTGTACTAGCAATAGAACCA  50

seq1  CTAGAGGTCCTAGGTCTCTTGGATTCTGGCTTATGTGGCCAAT-GGGAAG  95
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTAGAGGTCCTAGGTCTCTTGGATTCTGGCTTATGTGGCCAATGGGGAAG  100

seq1  GGTTG-TTGGTGACTGCCATTAGTCAAAGCCAAGAGCAGTTGTGCCTATG  144
      ||||| |||||| |||||||||||||||||||||||||||||||| ||||
seq2  GGTTGCTTGGTGCCTGCCATTAGTCAAAGCCAAGAGCAGTTGTGCTTATG  150

seq1  ATATGGAATCC-AAAATCTTATAGGTGATAGACCTTGGTGATCAGTGTCA  193
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATATGGAATCCAAAAATCTTATAGGTGATAGACCTTGGTGATCAGTGTCA  200

seq1  GAGCCTGAATACTGGGTGGAAGAAATACCAAAGATAGGATAAAAAATAGC  243
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGTGAATACTGGGTGGAAGAAATACCAAAGATAGGATAAAAAATAGC  250

seq1  AAACAGTGATGGTGGTTATGGGGCTTAGGGTTCAATTAAAAAATATAAAC  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTGATGGTGGTTATGGGGCTTAGGGTTCAATTAAAAAATATAAAC  300

seq1  AAGTCTTCTCTCCATTGGCACCAGAAAAAACCACAATTTACTTTGAAAAC  343
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAGTCTTCTCTCCATGGGCACCAGAAAAAACCACAATTTACTTTGAAAAC  350

seq1  TGACATACTTTATTTTTACCATGTTCTAACTGCTGGGATAATATTTATTC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATACTTTATTTTTACCATGTTCTAACTGCTGGGATAATATTTATTC  400

seq1  ATCTATATAATCACCCCTCCCCTGCTTTCTGACTAACATGATCATTTCTT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATATAATCACCCCTCCCCTGCTTTCTGACTAACATGATCATTTCTT  450

seq1  TATTTACTCTAGTCATATTATTTGATATGAGGCTTGTGTTATCGGACCTT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACTCTAGTCATATTATTTGATATGAGGCTTGTGTTATCGGACCTT  500

seq1  GTTGTCCTTTGGCTGACTGGTGGCACTAGATTGGGAAGTTGAAATATAGT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCCTTTGGCTGACTGGTGGCACTAGATTGGGAAGTTGAAATATAGT  550

seq1  GAATGGAGGAAGAAATTATCTATCTGAAACAGTTCAGAACAAAGTACTGC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGAGGAAGAAATTATCTATCTGAAACAGTTCAGAACAAAGTACTGC  600

seq1  TCAATGTTCAAAAACCTAAGAGAATAAATGATGAGAACATGAACTCAATG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTTCAAAAACCTAAGAGAATAAATGATGAGAACATGAACTCAATG  650

seq1  CAAGCTGGTTTCTACCCAAATTCACACCAGCACAATCACAAATAAGCACA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTGGTTTCTACCCAAATTCACACCAGCACAATCACAAATAAGCACA  700

seq1  GTGGACAAATGCTGATCTCATTCTCACCTGGGTCTTAGGCAGATTAGGAC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACAAATGCTGATCTCATTCTCACCTGGGTCTTAGGCAGATTAGGAC  750

seq1  TCAATGCAAACTGATCCATCAGGGTGCCAACATAGAAAAGTAAAGGCTTG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGCAAACTGATCCATCAGGGTGCCAACATAGAAAAGTAAAGGCTTG  800

seq1  CTATCTTCTATACCTTCAGATGTGGGAGGTCCCTGTGGATAAGACTTTCA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTTCTATACCTTCAGATGTGGGAGGTCCCTGTGGATAAGACTTTCA  850

seq1  TGTGTTCTCTAAGACTAGCATCTGTAATGGTCACAATCTCCTATAGTATC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCTCTAAGACTAGCATCTGTAATGGTCACAATCTCCTATAGTATC  900

seq1  GCATACCTTTAGTATAAGAAAAAATAAATGGAATTC  929
      ||||||||||||||||||||||||||||||||||||
seq2  GCATACCTTTAGTATAAGAAAAAATAAATGGAATTC  936