BAC Information

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BAC

Clone NameB6Ng01-209L11
Chromosome15 (Build37)
Map Location 58,013,846 - 58,014,896
singlet/doubletsinglet
Overlap geneFbxo32
Upstream geneBC026439, Zhx2, Derl1, Wdr67, BC030396, 9130401M01Rik, Zhx1, Atad2, LOC665244, 2410187C16Rik
Downstream gene8230402K04Rik, Anxa13, LOC100040231, D15Ertd621e, EG631797, Tmem65, EG546638, Trmt12, Rnf139, Tatdn1, Ndufb9, Mtss1, LOC100040330
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209L11.bB6Ng01-209L11.g
ACCGA028263GA028264
length1,0531,151
definitionB6Ng01-209L11.b B6Ng01-209L11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacagcactgtgaagctaaagaattagtgcttgcctatgtaagt
acctgtgcacacaaagacagatggtgaacggggtctcagagagaaatcaa
tataaggggtgggggaaatgaagatctttgagttccttttcctaccctgc
tgagtgagctttactctcttcataagttgggggctgagataggaaggaac
aacctcatgttgttggcactgctgcctcttagggtctggctcagggaaat
caggggaggaactcaaggcaggaacctggaggcagggactgaaacagagg
ccacaaagggacactcactgcttactggcttgctccccatagcctgtcca
gcctgctttgctatagcatccaggaccaccagctaagaagtagcactgcc
cacagtcagctgggtcaatcaccaatctagagactgccacaggccagtta
ggcggcgacagtttctaaatcgagggtccctcttccaaaatgactttagc
ttgtgtgaagttaatcagagcactagccagcacagatatggtaccttcca
ggagagaatgtggcagtgtttgcaaagctgcagggtgaccccatactgct
ctcttcttgggtaacatcgtacaagcttaaaatacatcttcttccaatcc
agctgccctttgtcagacaagatcaaacgcttgcgaatctaaaaaaaaaa
aaaaaaaaaaaaaaaagaaatggagaaacgtgaattcagaagacttcacc
aagatgatagtctggggctttctggttctgaaaagataggctctcactct
ttctccctacattttacagggacccttatcatacccagggaagaaaactg
tcaaaatgttgttataaagcaacattttcttagctctccccactaaccca
ctgtgctgtgtacccagcttctccaaacaaacagggcagctattgattcc
tttcctagtgactgttttatgggtgctcctggcctgctcttcaagctaag
gttatccacaagccaacttcaatgtatttctttgagtgataattctacga
tga
gaattctcatcctgttttctataataatttacattcccatgaatactgtc
caggttcccttttctctgcttcttgccaacacttactttgtttaggttta
ttttgtttggttttgtttttttcttttggtgctagtcattccaatggggc
tgaggtgatatcacactatcattttatttgtgtttacctgatgatcagtg
atactgaacatttttccatattcttggtcatttatcttcttttaagaaat
atctgttcagcctggcagtggtggcacacgcctttaaccctagcacttgg
gaggcagaggcaggcagatttctgcatttgaggccagcctagtctacaga
gtgaattccaggacagccaaggctacacagagaaaccctggttcagaaaa
aaagaaaagaaaagaaaaaaaagaagagaaaaggaaagaaaagaaaagaa
aagaaaagaagagaaaagaaaagaaaagaaaaagaaatgtctgttcgaat
atttaggctatttttaactggattatttccttcttctggatgtttttgct
aagatttttttcaccccatatattacagatattaatcctttatcagactg
aaggcttgaaagtgtttcctccctttctgcagagtgtctctaactctgta
gcttgtgctctatgccatagagaagattctccattagaagtaatccaatt
aactacttttagttgtaaatgaaagaattgaaagcattccagacagctca
tggaatttaaaagaaatgttaggaaatgagtctgaacatgagctgtggtc
agagcatccccagggctctaggaacaggaaaggacagatggtctggtctt
acaggctactgtcactgggatgaatcgatttgacatccacccccctttgg
tcacatgtctaatcttctgtaagccagtacagaaagacgttcctttgatt
caaccaagacagcactgaatgggggaaaagaaatacattattgttaccaa
aatgtggaatagatcctagaccacctaaaaaccatccatgtctgcctgga
cctaaagcctcatgcctcccaaaccctataacctttatacagtgaaaagg
ttctgttcttacctagatcacccacccgttgtaatggattggctcaatta
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_58013846_58014896
seq2: B6Ng01-209L11.b_48_1100

seq1  GAATTCCACAGCACTGTGAAGCTAAAGAATTAGTGCTTGCCTATGTAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGCACTGTGAAGCTAAAGAATTAGTGCTTGCCTATGTAAGT  50

seq1  ACCTGTGCACACAAAGACAGATGGTGAACGGGGTCTCAGAGAGAAATCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGCACACAAAGACAGATGGTGAACGGGGTCTCAGAGAGAAATCAA  100

seq1  TATAAGGGGTGGGGGAAATGAAGATCTTTGAGTTCCTTTTCCTACCCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGGGGTGGGGGAAATGAAGATCTTTGAGTTCCTTTTCCTACCCTGC  150

seq1  TGAGTGAGCTTTACTCTCTTCATAAGTTGGGGGCTGAGATAGGAAGGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGAGCTTTACTCTCTTCATAAGTTGGGGGCTGAGATAGGAAGGAAC  200

seq1  AACCTCATGTTGTTGGCACTGCTGCCTCTTAGGGTCTGGCTCAGGGAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCATGTTGTTGGCACTGCTGCCTCTTAGGGTCTGGCTCAGGGAAAT  250

seq1  CAGGGGAGGAACTCAAGGCAGGAACCTGGAGGCAGGGACTGAAACAGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGAGGAACTCAAGGCAGGAACCTGGAGGCAGGGACTGAAACAGAGG  300

seq1  CCACAAAGGGACACTCACTGCTTACTGGCTTGCTCCCCATAGCCTGTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAAGGGACACTCACTGCTTACTGGCTTGCTCCCCATAGCCTGTCCA  350

seq1  GCCTGCTTTGCTATAGCATCCAGGACCACCAGCTAAGAAGTAGCACTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCTTTGCTATAGCATCCAGGACCACCAGCTAAGAAGTAGCACTGCC  400

seq1  CACAGTCAGCTGGGTCAATCACCAATCTAGAGACTGCCACAGGCCAGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCAGCTGGGTCAATCACCAATCTAGAGACTGCCACAGGCCAGTTA  450

seq1  GGCGGCGACAGTTTCTAAATCGAGGGTCCCTCTTCCAAAATGACTTTAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGCGACAGTTTCTAAATCGAGGGTCCCTCTTCCAAAATGACTTTAGC  500

seq1  TTGTGTGAAGTTAATCAGAGCACTAGCCAGCACAGATATGGTACCTTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGAAGTTAATCAGAGCACTAGCCAGCACAGATATGGTACCTTCCA  550

seq1  GGAGAGAATGTGGCAGTGTTTGCAAAGCTGCAGGGTGACCCCATACTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAATGTGGCAGTGTTTGCAAAGCTGCAGGGTGACCCCATACTGCT  600

seq1  CTCTTCTTGGGTAACATCGTACAAGCTTAAAATACATCTTCTTCCAATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTTGGGTAACATCGTACAAGCTTAAAATACATCTTCTTCCAATCC  650

seq1  AGCTGCCCTTTGTCAGACAAGATCAAACGCTTGCGAATCTAAAAAAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCCTTTGTCAGACAAGATCAAACGCTTGCGAATCTAAAAAAAAAA  700

seq1  AAAAAAAAAAAAAAAAGAAATGGAGAAACGTGAATTCAGAAGACTTCACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAGAAATGGAGAAACGTGAATTCAGAAGACTTCACC  750

seq1  AAGATGATAGTCTGGGGCTTTCTGGTTCTGAAAAGATAGGCTCTCACTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGATAGTCTGGGGCTTTCTGGTTCTGAAAAGATAGGCTCTCACTCT  800

seq1  TTCTCCCTACATTTTACAGGGACCC-TATCATACCCAGGGAAGAAAACTG  849
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTCTCCCTACATTTTACAGGGACCCTTATCATACCCAGGGAAGAAAACTG  850

seq1  TCAAAATGTTGTTATAAAGCAACATTTTCTTAGCTCTCCCCACTAACCCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATGTTGTTATAAAGCAACATTTTCTTAGCTCTCCCCACTAACCCA  900

seq1  CTGTGCTGTGTACCCAGC-TCTCCAAACAAACA-GGCAGCTA-TGATTCC  946
      |||||||||||||||||| |||||||||||||| |||||||| |||||||
seq2  CTGTGCTGTGTACCCAGCTTCTCCAAACAAACAGGGCAGCTATTGATTCC  950

seq1  TTTCCTAGTGACTGTTTTTATGGTGCTCCTGG-CTGCTCCTTCAAAGCTT  995
      ||||||||||||||||||   ||||||||||| ||||| |||| ||||| 
seq2  TTTCCTAGTGACTGTTTTATGGGTGCTCCTGGCCTGCT-CTTC-AAGCTA  998

seq1  AGGTTATTCCCACAAGCC-ACTTCAATGT-TTTCTTTGAGTGATAATTTC  1043
      |||||||  ||||||||| |||||||||| |||||||||||||||| |||
seq2  AGGTTAT--CCACAAGCCAACTTCAATGTATTTCTTTGAGTGATAA-TTC  1045

seq1  TACGAAGA  1051
      ||||| ||
seq2  TACGATGA  1053