BAC Information

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BAC

Clone NameB6Ng01-210N03
Chromosome15 (Build37)
Map Location 79,556,252 - 79,557,302
singlet/doubletsinglet
Overlap geneUnc84b
Upstream geneMfng, Card10, LOC641104, LOC100041601, Cdc42ep1, Lgals2, Gga1, Sh3bp1, Pdxp, Lgals1, Nol12, Triobp, H1f0, Gcat, Galr3, LOC100042603, Ankrd54, Eif3s6ip, 1700088E04Rik, Polr2f, Sox10, LOC100041655, Pick1, Slc16a8, Baiap2l2, Pla2g6, Maff, 4732495E13Rik, Csnk1e, LOC675798, LOC100041676, Kcnj4, Kdelr3, Ddx17, Dmc1, 4933432B09Rik, Pgea1, Tomm22, Josd1, Gtpbp1
Downstream geneDnalc4, Npcd, Nptxr, Cbx6, LOC100042748, Apobec3, Cbx7, Pdgfb, Rpl3, Syngr1, Map3k7ip1, Mgat3, EG666948, Smcr7l, Atf4, Rps19bp1, Cacna1i, Enthd1, Grap2, AW544981, Tnrc6b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210N03.bB6Ng01-210N03.g
ACCGA029055GA029056
length1,060814
definitionB6Ng01-210N03.b B6Ng01-210N03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatccccagtcatggttagcattatcagtgcatagaatggtcata
ggaagcttgtttgcttttttctcaagtgtctagcctgtatgctctgctta
aagctatcgtgttataggactgaagacctggctcagttaagagcactggc
tgctcttccatgtaatccaggttcaattcctggcattcacatggggcaac
ttgtaattgtctgtcactctggttctaagggatccaaagccctcttctgg
cctcttaggacaccagtacacagatgacacacagacatatataccagcaa
aatacacatacacacaaaataaagttaaacaaaatgaattaaaatgaact
gacctatattcctagctccagaatctgcctctaagaggactaggacatct
gacacccatgtgccctccctgaggccctagctctctgcacattgatcatc
ttgaacacccttcgcagtcacttccttgtcacaacccttccttaataaaa
ctcacttcggcggagcccctgatcagaaagctctggatgctgccatctgt
gtcactgacaggagagggtcatctccaccctataccctgaagtaaggcag
ggtaggaagataggcccatccctgattcctctgccgggtagtgcaaatac
tggatcctagaagatgtctactgttgactgggagtgtgaggcaccatccc
acaagcacacagccctgtacctggaaatagaaggtctggatgggctcccc
atcctggtcgtaggcaaacgtgccaagaagtgtcccttcctgctgcaggt
cttcatcgaagccctacagaaaagcagacagggaggagtcagggaggacc
acctccctcgtacatcatggtctctccctggctctcttttaaacctctca
ctgccagagccaccttcagtgtgactctcagcaaagacccctacataggc
ccactgaagatcatgtactcacaaaagatggcgaagttctttgggagcac
tgggagattagtgctgtttgggtgacaggcctttgggcacgtgctcttag
gtaaccggct
gaattcagttcccagcatccacagcaattagctcacagcaattaagccca
ccaggcagaagtaaaagaccaccaactcggctagcccatggtggtgcagg
cctttaatcccagtgagaggcagaggctggcagatctctgtgagttcaag
gccaacttgatctacagagttgatttccagttcagccaaagcgacacaga
gaaacactgtctcaaactaacaaaacaaaagaccagccattcaaatggcc
aaattggagcaaaaaaaagaaaataaagaaaaagaaaaaaaaatttaaat
tgtgaacagcagcacagagctggtccagcaaccgtctgccctagtgcaag
ttttagaggtcgtccctagatggggaagatgagggttttatagcttagga
gaccgggctttccgaacaggggctttggcagacaaagaagcagggttaca
gaagcagaacaagttggtcatgaggagctcctgaaagaaaggcatggctg
ccatttcttgaacaggaagtacagaaatgtgtagctgaggttctacacgg
ggcatagcttaatccttgaaagaggttcatcataaacaggaatgaaccta
gttcaaccttgctataagatggcactcaagcttaagatggaggcaggtta
gttcatcaacaaccacctataaccaactccagttccaagggaactggtgc
ccttttctgactctggacaccctatacacatgtgcaaataccatccccct
cacatatacacataattgttgttgggttttttgtttttgtttgctttggt
ttttactttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_79556252_79557302
seq2: B6Ng01-210N03.b_47_1106

seq1  GAATTCATCCCCAGTCATGGTTAGCATTATCAGTGCATAGAATGGTCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCCCAGTCATGGTTAGCATTATCAGTGCATAGAATGGTCATA  50

seq1  GGAAGCTTGTTTGCTTTTTTCTCAAGTGTCTAGCCTGTATGCTCTGCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCTTGTTTGCTTTTTTCTCAAGTGTCTAGCCTGTATGCTCTGCTTA  100

seq1  AAGCTATCGTGTTATAGGACTGAAGACCTGGCTCAGTTAAGAGCACTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATCGTGTTATAGGACTGAAGACCTGGCTCAGTTAAGAGCACTGGC  150

seq1  TGCTCTTCCATGTAATCCAGGTTCAATTCCTGGCATTCACATGGGGCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTCCATGTAATCCAGGTTCAATTCCTGGCATTCACATGGGGCAAC  200

seq1  TTGTAATTGTCTGTCACTCTGGTTCTAAGGGATCCAAAGCCCTCTTCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATTGTCTGTCACTCTGGTTCTAAGGGATCCAAAGCCCTCTTCTGG  250

seq1  CCTCTTAGGACACCAGTACACAGATGACACACAGACATATATACCAGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTAGGACACCAGTACACAGATGACACACAGACATATATACCAGCAA  300

seq1  AATACACATACACACAAAATAAAGTTAAACAAAATGAATTAAAATGAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACACATACACACAAAATAAAGTTAAACAAAATGAATTAAAATGAACT  350

seq1  GACCTATATTCCTAGCTCCAGAATCTGCCTCTAAGAGGACTAGGACATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTATATTCCTAGCTCCAGAATCTGCCTCTAAGAGGACTAGGACATCT  400

seq1  GACACCCATGTGCCCTCCCTGAGGCCCTAGCTCTCTGCACATTGATCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCCATGTGCCCTCCCTGAGGCCCTAGCTCTCTGCACATTGATCATC  450

seq1  TTGAACACCCTTCGCAGTCACTTCCTTGTCACAACCCTTCCTTAATAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACACCCTTCGCAGTCACTTCCTTGTCACAACCCTTCCTTAATAAAA  500

seq1  CTCACTTCGGCGGAGCCCCTGATCAGAAAGCTCTGGATGCTGCCATCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTCGGCGGAGCCCCTGATCAGAAAGCTCTGGATGCTGCCATCTGT  550

seq1  GTCACTGACAGGAGAGGGTCATCTCCACCCTATACCCTGAAGTAAGGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTGACAGGAGAGGGTCATCTCCACCCTATACCCTGAAGTAAGGCAG  600

seq1  GGTAGGAAGATAGGCCCATCCCTGATTCCTCTGCCGGGTAGTGCAAATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGAAGATAGGCCCATCCCTGATTCCTCTGCCGGGTAGTGCAAATAC  650

seq1  TGGATCCTAGAAGATGTCTACTGTTGACTGGGAGTGTGAGGCACCATCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCCTAGAAGATGTCTACTGTTGACTGGGAGTGTGAGGCACCATCCC  700

seq1  ACAAGCACACAGCCCTGTACCTGGAAATAGAAGGTCTGGATGGGCTCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCACACAGCCCTGTACCTGGAAATAGAAGGTCTGGATGGGCTCCCC  750

seq1  ATCCTGGTCGTAGGCAAACGTGCCAAGAAGTGTCCCTTCCTGCTGCAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGGTCGTAGGCAAACGTGCCAAGAAGTGTCCCTTCCTGCTGCAGGT  800

seq1  CTTCATCGAAGCCCTACAGAAAAGCAGACAGGGAGGAGTCAGGGAGGACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCGAAGCCCTACAGAAAAGCAGACAGGGAGGAGTCAGGGAGGACC  850

seq1  ACCTCCCTCGTACATCATGGTCTCTCCCTGGCTCTCTTTTAAACCTCTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCCTCGTACATCATGGTCTCTCCCTGGCTCTCTTTTAAACCTCTCA  900

seq1  CTGCCAGAGCCACC-TCAGTGTGACTCTCAGCAAAGACCCC-ACATA-GC  947
      |||||||||||||| |||||||||||||||||||||||||| ||||| ||
seq2  CTGCCAGAGCCACCTTCAGTGTGACTCTCAGCAAAGACCCCTACATAGGC  950

seq1  CCACTGAAGATCAGGTACTCAC-AAAGATGGCGAAG-TCCTTGGGAGCAC  995
      ||||||||||||| |||||||| ||||||||||||| || ||||||||||
seq2  CCACTGAAGATCATGTACTCACAAAAGATGGCGAAGTTCTTTGGGAGCAC  1000

seq1  T-GGAGA-TAGTGCTG-TTGGGTGACAAGGCCTTGGGCACGTGCTCTAAG  1042
      | ||||| |||||||| |||||||||| | | ||||||||||||||| ||
seq2  TGGGAGATTAGTGCTGTTTGGGTGACAGGCCTTTGGGCACGTGCTCTTAG  1050

seq1  GTAA-CGGCT  1051
      |||| |||||
seq2  GTAACCGGCT  1060