BAC Information

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BAC

Clone NameB6Ng01-210P14
Chromosome15 (Build37)
Map Location 42,220,828 - 42,324,569
singlet/doubletdoublet
Overlap geneLOC100039197, Angpt1
Upstream geneOxr1, Abra, EG432946, LOC432947, LOC100039268
Downstream geneRspo2, LOC675960, Eif3s6, Ttc35
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210P14.bB6Ng01-210P14.g
ACCGA029171GA029172
length1,1611,122
definitionB6Ng01-210P14.b B6Ng01-210P14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(42,220,828 - 42,221,996)(42,323,446 - 42,324,569)
sequence
gaattctctgtttagatttgtaccccatttttaaactggattgtttactt
cgctagtgtctagttttgctggtgtgtagtcctttatatatttggaaatt
aattctttgtcagatgtgtggttggtaagaatctttcccatttcctaggc
tggaatttgattctattgtcttacagaagcttatcagattcatcatatct
catttattaattgttggtcttagtgtctgcacttttcatgttctgttcaa
gaagttgtctcctgtgccaatgcattcaaggctacaccccactttctctt
ccatcagccccagtgtatctggttttattaatacatccatatctattacc
cgtcacaaaactcaagttcaagtggatcaaaattcacaacataaaagtcc
attttgcttaaaatattatctttaagctaagaaatgtcacagagggcttt
tgattgccagctaaagctagtgcttaccctgaaagacaaaacacagggtg
caaagcaaattctgaaaggaaagtttaggtttagttcttgctgctcaata
gaggattatgccttaaatcttttctttattttattttattttttttattg
ggtatttatttcatttacatttccaatgctatcccaaaagtcccctaaac
gctctcccacccactcccctacccacccactcccacttcttggccctggc
gttcccttgtactgagtaaatcttttatttgtatgtcctttattagtcag
ctaattaattagaagagggctaatattattttaaaggacatgcagcttgg
taattatcctatcatgtccatgaaaccatttactttaggatgttcaagaa
aagtcattgcctaagcctcttccaccatgatattatatgccactgagaaa
gtacgtctttcaatcttcatgatatgtatagaataactgagtgggtaaat
tttaaagaaataaaattagtttttcttccaagtatgggttattcaaaaat
atatttcatctctctttgatgatcatattccatcctttagaagatatgaa
gccaggcgtggttgcaccacgcccttattcccagcacctgggaaggcaga
gcaaggccagattctgagttccgagcagcctgcctacaagtggagtctag
gacagcagact

gaattcttgctagcgagatactagctcaggcgagaagaatacattgttaa
tgagttgttgttgtcagatattcaggtagaacaaaaactgtcaggataat
ctgcctacttttccatgacagaaaaagaattaggtgagatgtatgagata
atgcaaagcatgcagtttcaatgacacagagtgggcactaagttttagtc
ctttctacctctactaaggaacaaaattcagttgaactagcattaaataa
gttgtctacagcaagacttcttcagagcatatctaaacacagtgcttaag
actccctacaaagagtggtccaaactgcttcttccagcctaaatttcctg
atatctaaaatgggatcatagctttaccttataagatcatggtaacatta
taaatacatacacattatctttatgtattggatagatcaagtgtgggtga
gaatcaagtttatatgttttacctcaagaaatgaaaactgtgataatgtg
ttaatattccatggcaaaggtatgtctaggacacaataagcagatatgca
tctttccctaaacatcttttgatggaaacactgtaaagtgaattttccat
atagtgagcactcaatttcatattgctttcacactagaacatataattcc
attagaaacatttattctgaatattgctaagaaacatattttcagaaatg
atccagcaaactttcttcttgcaatggcaggaggatatcttggactagta
gtcatttcaaggtgcatcatatccacttttggcagagtcctgataccaca
tttataattgtgtaatctttgcaaacatttggtcacgtttattcttgggc
acattatgtagttgagaagtatggccttcagggttattgcagggtcagag
tttagctggctgcatcatgccatgcattttgtcagagcatatgttattgt
taggattaacagacacactgcatggaaacattgcttaatatgcagtagag
aggacgattgagcactcttgatgtccaccagtcctccacagtctttgtca
tcctgtacacctccacggttaagatacatcacatgcattgcagcactaga
aactaatcataatattgaaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_42220828_42221996
seq2: B6Ng01-210P14.b_45_1205

seq1  GAATTCTCTGTTTAGATTTGTACCCCATTTTTAAACTGGATTGTTTACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTTTAGATTTGTACCCCATTTTTAAACTGGATTGTTTACTT  50

seq1  CGCTAGTGTCTAGTTTTGCTGGTGTGTAGTCCTTTATATATTTGGAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTAGTGTCTAGTTTTGCTGGTGTGTAGTCCTTTATATATTTGGAAATT  100

seq1  AATTCTTTGTCAGATGTGTGGTTGGTAAGAATCTTTCCCATTTCCTAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTTGTCAGATGTGTGGTTGGTAAGAATCTTTCCCATTTCCTAGGC  150

seq1  TGGAATTTGATTCTATTGTCTTACAGAAGCTTATCAGATTCATCATATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTTGATTCTATTGTCTTACAGAAGCTTATCAGATTCATCATATCT  200

seq1  CATTTATTAATTGTTGGTCTTAGTGTCTGCACTTTTCATGTTCTGTTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTAATTGTTGGTCTTAGTGTCTGCACTTTTCATGTTCTGTTCAA  250

seq1  GAAGTTGTCTCCTGTGCCAATGCATTCAAGGCTACACCCCACTTTCTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTGTCTCCTGTGCCAATGCATTCAAGGCTACACCCCACTTTCTCTT  300

seq1  CCATCAGCCCCAGTGTATCTGGTTTTATTAATACATCCATATCTATTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAGCCCCAGTGTATCTGGTTTTATTAATACATCCATATCTATTACC  350

seq1  CGTCACAAAACTCAAGTTCAAGTGGATCAAAATTCACAACATAAAAGTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCACAAAACTCAAGTTCAAGTGGATCAAAATTCACAACATAAAAGTCC  400

seq1  ATTTTGCTTAAAATATTATCTTTAAGCTAAGAAATGTCACAGAGGGCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCTTAAAATATTATCTTTAAGCTAAGAAATGTCACAGAGGGCTTT  450

seq1  TGATTGCCAGCTAAAGCTAGTGCTTACCCTGAAAGACAAAACACAGGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGCCAGCTAAAGCTAGTGCTTACCCTGAAAGACAAAACACAGGGTG  500

seq1  CAAAGCAAATTCTGAAAGGAAAGTTTAGGTTTAGTTCTTGCTGCTCAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCAAATTCTGAAAGGAAAGTTTAGGTTTAGTTCTTGCTGCTCAATA  550

seq1  GAGGATTATGCCTTAAATCTTTTCTTTATTTTATTTTATTTTTTTTATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTATGCCTTAAATCTTTTCTTTATTTTATTTTATTTTTTTTATTG  600

seq1  GGTATTTATTTCATTTACATTTCCAATGCTATCCCAAAAGTCCCCTAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTATTTCATTTACATTTCCAATGCTATCCCAAAAGTCCCCTAAAC  650

seq1  GCTCTCCCACCCACTCCCCTACCCACCCACTCCCACTTCTTGGCCCTGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCCCACCCACTCCCCTACCCACCCACTCCCACTTCTTGGCCCTGGC  700

seq1  GTTCCCTTGTACTGAGTAAATCTTTTATTTGTATGTCCTTTATTAGTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCTTGTACTGAGTAAATCTTTTATTTGTATGTCCTTTATTAGTCAG  750

seq1  CTAATTAATTAGAAGAGGGCTAATATTATTTTAAAGGACATGCAGCTTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTAATTAGAAGAGGGCTAATATTATTTTAAAGGACATGCAGCTTGG  800

seq1  TAATTATCCTATCATGTCCATGAAACCATTTACTTTAGGATGTTCAAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATCCTATCATGTCCATGAAACCATTTACTTTAGGATGTTCAAGAA  850

seq1  AAGTCATTGCCTAAGCCTCTTCCACCATGATATTTATATGCCACTGAGAA  900
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAGTCATTGCCTAAGCCTCTTCCACCATGATA-TTATATGCCACTGAGAA  899

seq1  AGTACGTCTTTCAATCTTCATGATATGTATAGAATAACTGAGTGGGTAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACGTCTTTCAATCTTCATGATATGTATAGAATAACTGAGTGGGTAAA  949

seq1  TTTTAAAAGAAATAAAATTAG-TTTTCTTCCAAGTATTGGTTATTCAAAA  999
      |||| |||||||||||||||| ||||||||||||||| ||||||||||||
seq2  TTTT-AAAGAAATAAAATTAGTTTTTCTTCCAAGTATGGGTTATTCAAAA  998

seq1  ATATATTTCATCTCTCTTTGATGATCAATATTTCCATCCTTTAGAAGATA  1049
      |||||||||||||||||||||||||| ||| |||||||||||||||||| 
seq2  ATATATTTCATCTCTCTTTGATGATC-ATA-TTCCATCCTTTAGAAGAT-  1045

seq1  AAGGAAGCCAGGCGTGGTGGCA-CACGCCTTTAATCCCAGCACTTGGG-A  1097
       | ||||||||||||||| ||| |||||| ||| ||||||||| |||| |
seq2  -ATGAAGCCAGGCGTGGTTGCACCACGCCCTTATTCCCAGCACCTGGGAA  1094

seq1  GGCAGAGGCAGG-CAGATTTCTGAGTT-CGAGGCCAGCCTGGTCTACAAA  1145
      |||||||  ||| |||| ||||||||| ||||  |||||| | |||| ||
seq2  GGCAGAGCAAGGCCAGA-TTCTGAGTTCCGAG--CAGCCT-GCCTAC-AA  1139

seq1  GTGAGTTCTAGGACAGCCAAGACT  1169
      |||   |||||||||||  |||||
seq2  GTGGAGTCTAGGACAGC--AGACT  1161


seq1: chr15_42323446_42324569
seq2: B6Ng01-210P14.g_66_1187 (reverse)

seq1  TATTTC-ATATTATGATGTAGTTTCTAGTGCTTCCAATGCATGTGATGGT  49
      |||||| |||||||||| ||||||||||||| | ||||||||||||| ||
seq2  TATTTCAATATTATGAT-TAGTTTCTAGTGC-TGCAATGCATGTGAT-GT  47

seq1  ATCTTAACCGTG--AGTGTACAGGGATGACAAAGACTGGTGAGGACTGGT  97
      ||||||||||||   ||||||| |||||||||||||||  ||||||||||
seq2  ATCTTAACCGTGGAGGTGTACA-GGATGACAAAGACTGTGGAGGACTGGT  96

seq1  GGACATC-AGAGTGCTCAATCGTCCTCTCTACTGCATATTAAGCATTGTT  146
      ||||||| ||||||||||||||||||||||||||||||||||||| ||||
seq2  GGACATCAAGAGTGCTCAATCGTCCTCTCTACTGCATATTAAGCAATGTT  146

seq1  TCCATGCAGTGTGTTCTGTTTAATCCTAACAAT-ACATATGCTCTGACAA  195
      ||||||||||||| |||| |||||||||||||| ||||||||||||||||
seq2  TCCATGCAGTGTG-TCTG-TTAATCCTAACAATAACATATGCTCTGACAA  194

seq1  AATGCATGGCATGATGCAGCCAGCTAAACTCTGACCCTGCAATAACCCTG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATGGCATGATGCAGCCAGCTAAACTCTGACCCTGCAATAACCCTG  244

seq1  AAGGCCATACTTCTCAACTACATAATGTGCCCAAGAATAAACGTGACCAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCATACTTCTCAACTACATAATGTGCCCAAGAATAAACGTGACCAA  294

seq1  ATGTTTGCAAAGATTACACAATTATAAATGTGGTATCAGGACTCTGCCAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGCAAAGATTACACAATTATAAATGTGGTATCAGGACTCTGCCAA  344

seq1  AAGTGGATATGATGCACCTTGAAATGACTACTAGTCCAAGATATCCTCCT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGATATGATGCACCTTGAAATGACTACTAGTCCAAGATATCCTCCT  394

seq1  GCCCATTGCAAGAAGAAAGTTTGCTGGATCATTTCTGAAAATATGTTTCT  445
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  G-CCATTGCAAGAAGAAAGTTTGCTGGATCATTTCTGAAAATATGTTTCT  443

seq1  TAGCAATATTCAGAATAAATGTTTCTAATGGAATTATATGTTCTAGTGTG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATATTCAGAATAAATGTTTCTAATGGAATTATATGTTCTAGTGTG  493

seq1  AAAGCAATATGAAATTGAGTGCTCACTATATGGAAAATTCACTTTACAGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAATATGAAATTGAGTGCTCACTATATGGAAAATTCACTTTACAGT  543

seq1  GTTTCCATCAAAAGATGTTTAGGGAAAGATGCATATCTGCTTATTGTGTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCATCAAAAGATGTTTAGGGAAAGATGCATATCTGCTTATTGTGTC  593

seq1  CTAGACATACCTTTGCCATGGAATATTAACACATTATCACAGTTTTCATT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACATACCTTTGCCATGGAATATTAACACATTATCACAGTTTTCATT  643

seq1  TCTTGAGGTAAAACATATAAACTTGATTCTCACCCACACTTGATCTATCC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGGTAAAACATATAAACTTGATTCTCACCCACACTTGATCTATCC  693

seq1  AATACATAAAGATAATGTGTATGTATTTATAATGTTACCATGATCTTATA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATAAAGATAATGTGTATGTATTTATAATGTTACCATGATCTTATA  743

seq1  AGGTAAAGCTATGATCCCATTTTAGATATCAGGAAATTTAGGCTGGAAGA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAAGCTATGATCCCATTTTAGATATCAGGAAATTTAGGCTGGAAGA  793

seq1  AGCAGTTTGGACCACTCTTTGTAGGGAGTCTTAAGCACTGTGTTTAGATA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTTTGGACCACTCTTTGTAGGGAGTCTTAAGCACTGTGTTTAGATA  843

seq1  TGCTCTGAAGAAGTCTTGCTGTAGACAACTTATTTAATGCTAGTTCAACT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGAAGAAGTCTTGCTGTAGACAACTTATTTAATGCTAGTTCAACT  893

seq1  GAATTTTGTTCCTTAGTAGAGGTAGAAAGGACTAAAACTTAGTGCCCACT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTGTTCCTTAGTAGAGGTAGAAAGGACTAAAACTTAGTGCCCACT  943

seq1  CTGTGTCATTGAAACTGCATGCTTTGCATTATCTCATACATCTCACCTAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCATTGAAACTGCATGCTTTGCATTATCTCATACATCTCACCTAA  993

seq1  TTCTTTTTCTGTCATGGAAAAGTAGGCAGATTATCCTGACAGTTTTTGTT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTCTGTCATGGAAAAGTAGGCAGATTATCCTGACAGTTTTTGTT  1043

seq1  CTACCTGAATATCTGACAACAACAACTCATTAACAATGTATTCTTCTCGC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTGAATATCTGACAACAACAACTCATTAACAATGTATTCTTCTCGC  1093

seq1  CTGAGCTAGTATCTCGCTAGCAAGAATTC  1124
      |||||||||||||||||||||||||||||
seq2  CTGAGCTAGTATCTCGCTAGCAAGAATTC  1122


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