BAC Information

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BAC

Clone NameB6Ng01-211B21
Chromosome15 (Build37)
Map Location 75,667,635 - 75,778,299
singlet/doubletdoublet
Overlap geneZc3h3, LOC672572, Gsdmdc1, Naprt1, Eef1d, Tigd5, Pycrl, Tsta3, Zfp623
Upstream geneCyp11b1, Cyp11b2, 2010109I03Rik, LOC625653, Ly6e, Ly6i, LOC666240, LOC100041528, Ly6a, Ly6c, LOC546642, EG625737, LOC100041546, I830127L07Rik, LOC100041070, LOC546644, LOC100041087, BC025446, LOC100041092, Ly6f, LOC100041652, LOC100041107, 9030619P08Rik, Ly6h, Gpihbp1, Zfp41, 2810039B14Rik, Top1mt, Rhpn1, Mafa
Downstream geneEif2s3x-ps1, Zfp707, 2410075B13Rik, Mapk15, AA409316, K230010J24Rik, Scrib, 2410104I19Rik, Nrbp2, Eppk1, BC024139, Plec1, LOC671535, Grina, Spatc1, LOC100041269, Oplah, Exosc4, Gpaa1, Cyc1, Sharpin, Maf1, EG626280, Brp16, Tssk5, Bop1, Scx, Hsf1, Dgat1, Scrt1, LOC666497, EG666504, Fbxl6, Gpr172b, Adck5, Cpsf1, Slc39a4, Vps28, Nfkbil2, Cyhr1, Kifc2, Foxh1, Ppp1r16a, Gpt1, Mfsd3, Recql4, Lrrc14, Lrrc24, C030006K11Rik, D15Wsu169e, Zfp251, Zfp7, Commd5, Rpl8, Zfp647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211B21.bB6Ng01-211B21.g
ACCGA029281GA029282
length1,1371,128
definitionB6Ng01-211B21.b B6Ng01-211B21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,667,635 - 75,668,788)(75,777,179 - 75,778,299)
sequence
gaattccagtaaggagcccacagcccttcctcacactctgccaggcaaca
ctagcagactttccatcttctccacccaaagctgtaagcctcttaaccca
tccttctcaactggccaaggggaacccagccatgtccaagccacccttct
ctctagcctttcacttgggttctatacccctccccccttaacatggttcc
tatcatcccagcagagtgcagcccagcctcagccagtgcctaagctttcc
tccttgtcataccttccttggtggagaggtgggtccggctggacggcagg
cagcagagccggtgcctgttgacctgcatcagacccttgtggggagtctt
ccttagaaccgggctattcttcccccggagggcctgtctccgtcgctggg
taagatggtttttgctggtggtggcagttgtagggctgttcttcttgtcc
ccaggaatgctatgaagataaaacacaaaaaaaaaaactaccaacaggct
cactgacaaaggcccaagcaccttcatcaactggagacagcacaggttgc
aatgtcctccaagtagagcagagcagagtggattcagaccctgtccctgt
ccctgccctgccccatgcaccctgcaccctgctcactgcccactgcccct
gccccagcccttctccaagccagatggaattttagtacagattttagtac
gagactacaggaaaaggtgatggagaaggaccgcattcctgaaaacgagc
tgccatcaggcttgcatgccatctcccaagcacatcttcaaggatgctac
aatactccacctctgaaagccgcacaatagaggaaggcaccggtatgaca
agaagaaatctattctctaggcatggtgagcatggcacccaggctcagat
aactagagacagcacagagccagaagaagtgagcatacagagagccaaag
accaaattaagacagcagaagaacctccttagggggtttatgacaggaca
gtaaatgtctttggagacactgtcttatgcatagcagcccctgctgttag
ccaaacaatacttgcatcagtggctgatgtgagttctgacccgtgaacat
ataccttaggcctaagaatgccatctcgagatcctga
gaattctttggtggcgaatgagtaaggagctctgactgaaacccttccca
cactctttgcattcaaaaggcctctccctggtatgaaccctctggtgtcg
aagcaggtctgaactgtgacaaaatgcttttccacactgtgcacacttga
acggcttttccccagtatggacatgctgatgctccctcaggcttgcgtag
tgaacgaagtctttcccgcacacgtggcacacacagagtctgtccccagt
gtggactctctggtgttcagtgaggagggaggtctgactgaagcctttcc
cacaatgatcacatttgtaaggcttctcccccgtgtgcgagatctgatgc
ggaactacatctgaattaaatgggaagcctttgccaccaccaccacagga
acgggcctccgcatctatgagttctctctgaagtataagaaggtttgaat
tgagaatggggtttcttcctgacttactgcacgtttgggctgtgtctcct
gtttgaatcttccagtgggtcactgtcatctgagtgaagcccccgtcctg
agaggagggactctccaagctctgcttgtctgggttccccaacagctgcg
ccaatctgtcttcatgaaattcccgagactcagaggcagagggctccagc
actgtgagttcgtctgacatcatcttatgtgaattttcatccccagaaat
tcaggcttccggatccccttcttgccactggctccctacaggagaatctg
aaatgagaaaagaagctggtctttcctctttggtaacgagaacgggccga
aggtgtggagttaaactaccatccgacagagaggaagcacctcctctgcc
cacacttctgaccttcactgttaccagccccaatcagccacccacatggg
aaaggcttcctgcggcccgacctgtgatatgggccaaccttaggacaaaa
taggctggtgctacacagcactctctaaccttgtgttccttgtggtgggg
tgacagaggataggatatagttcagggactctacttaaaaccagacatgt
aattcccaggatcacttcaaataacctctatcactccgactgcccaccac
ctcattcacattctgcaatcggtgatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_75667635_75668788
seq2: B6Ng01-211B21.b_46_1182

seq1  GAATTCCAGTAAGGAGCCCACAGCCCTTCCTCACACTCTGCCAGGCAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTAAGGAGCCCACAGCCCTTCCTCACACTCTGCCAGGCAACA  50

seq1  CTAGCAGACTTTCCATCTTCTCCACCCAAAGCTGTAAGCCTCTTAACCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAGACTTTCCATCTTCTCCACCCAAAGCTGTAAGCCTCTTAACCCA  100

seq1  TCCTTCTCAACTGGCCAAGGGGAACCCAGCCATGTCCAAGCCACCCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTCAACTGGCCAAGGGGAACCCAGCCATGTCCAAGCCACCCTTCT  150

seq1  CTCTAGCCTTTCACTTGGGTTCTATACCCCTCCCCCCTTAACATGGTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGCCTTTCACTTGGGTTCTATACCCCTCCCCCCTTAACATGGTTCC  200

seq1  TATCATCCCAGCAGAGTGCAGCCCAGCCTCAGCCAGTGCCTAAGCTTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATCCCAGCAGAGTGCAGCCCAGCCTCAGCCAGTGCCTAAGCTTTCC  250

seq1  TCCTTGTCATACCTTCCTTGGTGGAGAGGTGGGTCCGGCTGGACGGCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTCATACCTTCCTTGGTGGAGAGGTGGGTCCGGCTGGACGGCAGG  300

seq1  CAGCAGAGCCGGTGCCTGTTGACCTGCATCAGACCCTTGTGGGGAGTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGAGCCGGTGCCTGTTGACCTGCATCAGACCCTTGTGGGGAGTCTT  350

seq1  CCTTAGAACCGGGCTATTCTTCCCCCGGAGGGCCTGTCTCCGTCGCTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGAACCGGGCTATTCTTCCCCCGGAGGGCCTGTCTCCGTCGCTGGG  400

seq1  TAAGATGGTTTTTGCTGGTGGTGGCAGTTGTAGGGCTGTTCTTCTTGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATGGTTTTTGCTGGTGGTGGCAGTTGTAGGGCTGTTCTTCTTGTCC  450

seq1  CCAGGAATGCTATGAAGATAAAACACAAAAAAAAAAACTACCAACAGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAATGCTATGAAGATAAAACACAAAAAAAAAAACTACCAACAGGCT  500

seq1  CACTGACAAAGGCCCAAGCACCTTCATCAACTGGAGACAGCACAGGTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGACAAAGGCCCAAGCACCTTCATCAACTGGAGACAGCACAGGTTGC  550

seq1  AATGTCCTCCAAGTAGAGCAGAGCAGAGTGGATTCAGACCCTGTCCCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCCTCCAAGTAGAGCAGAGCAGAGTGGATTCAGACCCTGTCCCTGT  600

seq1  CCCTGCCCTGCCCCATGCACCCTGCACCCTGCTCACTGCCCACTGCCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCCTGCCCCATGCACCCTGCACCCTGCTCACTGCCCACTGCCCCT  650

seq1  GCCCCAGCCCTTCTCCAAGCCAGATGGAATTTTAGTACAGATTTTAGTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAGCCCTTCTCCAAGCCAGATGGAATTTTAGTACAGATTTTAGTAC  700

seq1  GAGACTACAGGAAAAGGTGATGGAGAAGGACCGCATTCCTGAAAACGAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTACAGGAAAAGGTGATGGAGAAGGACCGCATTCCTGAAAACGAGC  750

seq1  TGCCATCAGGCTTGCATGCCATCTCCCAAGCACATCTTCAAGGATGCTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATCAGGCTTGCATGCCATCTCCCAAGCACATCTTCAAGGATGCTAC  800

seq1  AATACTCCACCTCTGAAAGCCGCACAATAGAGGAAGGCACCGGTATGACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTCCACCTCTGAAAGCCGCACAATAGAGGAAGGCACCGGTATGACA  850

seq1  AGAAGAAATCTATTCTCTAGGCATGGTGAGCATGGCACCCAGGCTCAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAATCTATTCTCTAGGCATGGTGAGCATGGCACCCAGGCTCAGAT  900

seq1  AACTAGAGACAGCACAGAGCCAGAAGAAGTGAGCATACAGAGAGCCAAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGAGACAGCACAGAGCCAGAAGAAGTGAGCATACAGAGAGCCAAAG  950

seq1  ACCAAATTAAGACAGCAGGAAGAACCTCCTTAGGGGGGTTTATGACAAGG  1000
      ||||||||||||||||| |||||||||||||| ||||||||||||| |||
seq2  ACCAAATTAAGACAGCA-GAAGAACCTCCTTA-GGGGGTTTATGAC-AGG  997

seq1  ACAGTAAATGTCTTTTGGAAGAACACTGTCTTATGGCATAGGCAGGCCCC  1050
      |||||||||||| ||||||   |||||||||||| ||||| ||||  |||
seq2  ACAGTAAATGTC-TTTGGA--GACACTGTCTTAT-GCATA-GCAG--CCC  1040

seq1  CTGCCTGGTAAGCAAACAATACCTTTGCCATCAGTGGCTGATGTGAAGTT  1100
      ||| ||| ||  ||||||||||  ||| ||||||||||||||||||   |
seq2  CTG-CTGTTAGCCAAACAATAC--TTG-CATCAGTGGCTGATGTGA--GT  1084

seq1  TCTGACCCCGTGACCATATACCCTAGGC--TAGGATGCCATCTCAGAGTA  1148
      ||||| ||||||| |||||||| |||||   || |||||||||| ||| |
seq2  TCTGA-CCCGTGAACATATACCTTAGGCCTAAGAATGCCATCTC-GAG-A  1131

seq1  TCCTGA  1154
      ||||||
seq2  TCCTGA  1137

seq1: chr15_75777179_75778299
seq2: B6Ng01-211B21.g_67_1194 (reverse)

seq1  AGATCACACGA-TGCAGAATGTGAATGAGGGTGGTGGGCAGTCGGAGTGA  49
      ||||||| ||| |||||||||||||||| |||||||||||||||||||||
seq2  AGATCAC-CGATTGCAGAATGTGAATGA-GGTGGTGGGCAGTCGGAGTGA  48

seq1  TAGAGTTTATTTG-AGTGAT-CTTGGAATTACATGTCTTGGTTTTTAAGT  97
      ||||| ||||||| |||||| || ||||||||||||||  | ||||||||
seq2  TAGAGGTTATTTGAAGTGATCCTGGGAATTACATGTCT--GGTTTTAAGT  96

seq1  AGAGT-CCTG-ACTATATCCCTATCCCTCTGTCAC----CCACACAGGAC  141
      ||||| |||| ||||||| ||||| ||||||||||    |||||  | ||
seq2  AGAGTCCCTGAACTATAT-CCTAT-CCTCTGTCACCCCACCACAAGGAAC  144

seq1  ACAA-GTTAGAAGAGTGCTGTGTAGCA-CAGCCTA-TTTGTCCTAAGGTT  188
      |||| ||||| |||||||||||||||| ||||||| ||||||||||||||
seq2  ACAAGGTTAG-AGAGTGCTGTGTAGCACCAGCCTATTTTGTCCTAAGGTT  193

seq1  GG-CCATATCACAGGTCGGGCCGCAGGAAGCC-TTCCCATGTGGGTGGCT  236
      || ||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGCCCATATCACAGGTCGGGCCGCAGGAAGCCTTTCCCATGTGGGTGGCT  243

seq1  GATTGGGGCTGGTAACAGTGAAGGTCAGAAGTGTGGGCAGAGGAGGTGCT  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGGGCTGGTAACAGTGAAGGTCAGAAGTGTGGGCAGAGGAGGTGCT  293

seq1  TCCTCTCTGTCGGATGGTAGTTTAACTCCACACCTTCGGCCCGTTCTCGT  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCTGTCGGATGGTAGTTTAACTCCACACCTTCGGCCCGTTCTCGT  343

seq1  TACCAAAGGGGAAAGACCAGCTTCTTTTCTCATTTCAGATTCTCCTGTAG  386
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAAGAGGAAAGACCAGCTTCTTTTCTCATTTCAGATTCTCCTGTAG  393

seq1  GGAGCCAGTGGCAAGAAGGGGATCCGGAAGCCTGAATTTCTGGGGATGAA  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCAGTGGCAAGAAGGGGATCCGGAAGCCTGAATTTCTGGGGATGAA  443

seq1  AATTCACATAAGATGATGTCAGACGAACTCACAGTGCTGGAGCCCTCTGC  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACATAAGATGATGTCAGACGAACTCACAGTGCTGGAGCCCTCTGC  493

seq1  CTCTGAGTCTCGGGAATTTCATGAAGACAGATTGGCGCAGCTGTTGGGGA  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGTCTCGGGAATTTCATGAAGACAGATTGGCGCAGCTGTTGGGGA  543

seq1  ACCCAGACAAGCAGAGCTTGGAGAGTCCCTCCTCTCAGGACGGGGGCTTC  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGACAAGCAGAGCTTGGAGAGTCCCTCCTCTCAGGACGGGGGCTTC  593

seq1  ACTCAGATGACAGTGACCCACTGGAAGATTCAAACAGGAGACACAGCCCA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGATGACAGTGACCCACTGGAAGATTCAAACAGGAGACACAGCCCA  643

seq1  AACGTGCAGTAAGTCAGGAAGAAACCCCATTCTCAATTCAAACCTTCTTA  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTGCAGTAAGTCAGGAAGAAACCCCATTCTCAATTCAAACCTTCTTA  693

seq1  TACTTCAGAGAGAACTCATAGATGCGGAGGCCCGTTCCTGTGGTGGTGGT  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCAGAGAGAACTCATAGATGCGGAGGCCCGTTCCTGTGGTGGTGGT  743

seq1  GGCAAAGGCTTCCCATTTAATTCAGATGTAGTTCCGCATCAGATCTCGCA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGGCTTCCCATTTAATTCAGATGTAGTTCCGCATCAGATCTCGCA  793

seq1  CACGGGGGAGAAGCCTTACAAATGTGATCATTGTGGGAAAGGCTTCAGTC  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGGGGAGAAGCCTTACAAATGTGATCATTGTGGGAAAGGCTTCAGTC  843

seq1  AGACCTCCCTCCTCACTGAACACCAGAGAGTCCACACTGGGGACAGACTC  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTCCCTCCTCACTGAACACCAGAGAGTCCACACTGGGGACAGACTC  893

seq1  TGTGTGTGCCACGTGTGCGGGAAAGACTTCGTTCACTACGCAAGCCTGAG  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGCCACGTGTGCGGGAAAGACTTCGTTCACTACGCAAGCCTGAG  943

seq1  GGAGCATCAGCATGTCCATACTGGGGAAAAGCCGTTCAAGTGTGCACAGT  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCATCAGCATGTCCATACTGGGGAAAAGCCGTTCAAGTGTGCACAGT  993

seq1  GTGGAAAAGCATTTTGTCACAGTTCAGACCTGCTTCGACACCAGAGGGTT  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAAAGCATTTTGTCACAGTTCAGACCTGCTTCGACACCAGAGGGTT  1043

seq1  CATACCAGGGAGAGGCCTTTTGAATGCAAAGAGTGTGGGAAGGGTTTCAG  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCAGGGAGAGGCCTTTTGAATGCAAAGAGTGTGGGAAGGGTTTCAG  1093

seq1  TCAGAGCTCCTTACTCATTCGCCACCAAAGAATTC  1121
      |||||||||||||||||||||||||||||||||||
seq2  TCAGAGCTCCTTACTCATTCGCCACCAAAGAATTC  1128