BAC Information

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BAC

Clone NameB6Ng01-211M21
Chromosome15 (Build37)
Map Location 40,295,072 - 40,296,249
singlet/doubletsinglet
Overlap genenone
Upstream geneRims2, Tm7sf4, Dpys, Lrp12, LOC100039130, LOC670013
Downstream geneLOC664872, Zfpm2, Ppia-ps25
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211M21.bB6Ng01-211M21.g
ACCGA029764GA029765
length1,1671,171
definitionB6Ng01-211M21.b B6Ng01-211M21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccaaggataaattcatctcatcatcttgaaacatgttttcata
taggatgcctcagtattctatagattgtggattaggaatattcctgtatg
ccagaatgtgagagaactacactgtagtacagttcatgtaacatagttca
gtgaatctgagtggagagtgtcaactttagaattactattaaacaaacct
gtgaatatcagaacagagttgtgcttctctgtgggtcggagttgaagacc
tcagtctccagtatgttgacgtaattaatgaacaagtcccatcagcaaaa
tcgtactctgaatggctcaagatctctctgtcactagtgtgcgaatggta
ttctcagtcactgccacccacattgtactgaatattggttgcactggcaa
taatttcatccaatattcataagttcttccaacatgacagcaactcagct
catcttatttcaaagaacatagatgtctgtgttttcattcaaactcaagg
ctgaaatcaatcaagtagaaacaatataaatataaatataaagaatcaac
aaaaccaggagctggttccttgagaaaatcaacaagatagataaaccctt
agccagactaaccagggcgcacagagacagtatccaaattaacaaaatca
gaaatgaaaagggaaatataacaacagaaactgaggaaatttaaaagatc
atcagatcctactacaaaagattatattcaacacaactggaaaatctgga
tgaaatggacagttttctagacaggtaccaaataccaaagttaaatcacg
atcagatataccatctaaacagtccagtaacccctaaaaaaatagaagca
gtcattaaaagtctcccagcccaaagaaagaagaagaaagaagaaagaag
aaagaagaagaagaagaagaaagcagcagcctaggacacatggttttagt
gagatttttctgagagcgagatctatcagattcttcaaagaagaaagata
caattatttctttgattattcccacaaaattataacagaggaacactacc
caactaattctattgagctaccctaccatttttatataaactgttttttg
ttcattgaacctcattgccatacacttagcaagatttttactgagaccca
gatgtttacctgtctct
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatcctaatcatcagggaaatgcaaatcaaaacaacactgagatt
ccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagca
gatgctggcaaggatgtggagaaagggaacactcctccattgttggtgcg
atcgcaagcttggaaatcagtctggcggttcctcagaaaattggacatag
tactaccggaggatcctgcaatacctctcctgggcatatatccagaagat
gtcccaaccggtaagaaggacacatgctccactgtgttcatagcagcctt
atttataatagctggaagctggaaagaacccagatgcccctcaacagagg
aatggatacagaaaatgtggtacatctacacaatggagtactactcagct
attaaaaggaatgaatttatgaaattcctaggcaaatggatggacctgga
gggcatcatcctgagtgaggtaacccaatcacaaaggaactcacacaata
tgtactcactgataagtggtcattagcccagaaacttaggatacccaaga
tataagatacaagttgctaaacgcatgaaattcaagaagaaggaagaata
aagtgtggacactttaccccttcctagaaatgggaacaaaacacccatgg
aaggagttacagagacaaaatttggagctgtgacaaaaagatggaccatc
tagtgattgccatatgaagggatccatcccataatcagctcccaaacgct
gataccattgcacacactagcaaaattttgctgaaaggacccatatatag
ctctctcctgtgagactatgccggggccctagaaaacacagaagtggatg
atcacagtcagctattggatgggtcacacagcctccagtgcagaggtaga
gatattacccaaggaactaaagggactgtaccctatagtggaacacatat
gactaccagtactccgagctctttgtctctagctgcatattgcatcaaag
atgtcctagttcgcattcactgcagagaagtcattggactgccacttaat
gcccagtacaggaacgcagtctatggaattgcgtgcttaggttaatatct
tcctatctctcgcacgtatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_40295072_40296249
seq2: B6Ng01-211M21.b_48_1214 (reverse)

seq1  AGAGACAGCT--ACATCTGGGTCCTTTCAGT-AAAATCTTGCT-AGTGTA  46
      |||||||| |  |||||||||||   ||||| ||||||||||| ||||||
seq2  AGAGACAGGTAAACATCTGGGTC---TCAGTAAAAATCTTGCTAAGTGTA  47

seq1  T-GCAATG-GTGTCATTGGAACAAAAACAGTTTATAT-AAAATGGTAGGG  93
      | |||||| |  ||| || |  ||||||||||||||| ||||||||||||
seq2  TGGCAATGAGGTTCAATGAACAAAAAACAGTTTATATAAAAATGGTAGGG  97

seq1  TAGCTTCATAGAATTAGTTGGGTAGTGTTCCTTCTGTTTATATTTTGT-G  142
      |||||  |||||||||||||||||||||||| ||||||   ||||||| |
seq2  TAGCTCAATAGAATTAGTTGGGTAGTGTTCC-TCTGTTATAATTTTGTGG  146

seq1  GAATAATTCAAAG-AATATTTGTATTCTGTCTTCTTTGAAG-ATCTGATA  190
      |||||| |||||| |||| ||||| ||| |||||||||||| ||||||||
seq2  GAATAA-TCAAAGAAATAATTGTA-TCTTTCTTCTTTGAAGAATCTGATA  194

seq1  GATCTTCGCTCTCAGAAAAATTCTCACTAAAACCATGTGGTCCTAGGCTT  240
      |||| ||||||||||||||| ||||||||||||||||| ||||||||| |
seq2  GATC-TCGCTCTCAGAAAAA-TCTCACTAAAACCATGT-GTCCTAGGC-T  240

seq1  GCTTGCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  290
      || ||||||| |||||   |||||   ||||||| ||||||| |||||||
seq2  GC-TGCTTTC-TTCTT--CTTCTT--CTTCTTTC-TTCTTTC-TTCTTTC  282

seq1  TTTCTTTCTTTCTTTTTGGCTGGGAGACTTTTAATGACTGCTTCTATTTT  340
      ||   ||||||| ||| |||||||||||||||||||||||||||||||||
seq2  TT--CTTCTTTC-TTTGGGCTGGGAGACTTTTAATGACTGCTTCTATTTT  329

seq1  TTTAGGGGTTACTGGACTGTTTAGATGGTATATCTGATCCTGATTTAACT  390
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTTAGGGGTTACTGGACTGTTTAGATGGTATATCTGATCGTGATTTAACT  379

seq1  TTGGTATTTGGTACCTGTCTAGAAAACTGTCCATTTCATCCAGATTTTCC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTATTTGGTACCTGTCTAGAAAACTGTCCATTTCATCCAGATTTTCC  429

seq1  AGTTGTGTTGAATATAATCTTTTGTAGTAGGATCTGATGATCTTTTAAAT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGTTGAATATAATCTTTTGTAGTAGGATCTGATGATCTTTTAAAT  479

seq1  TTCCTCAGTTTCTGTTGTTATATTTCCCTTTTCATTTCTGATTTTGTTAA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCAGTTTCTGTTGTTATATTTCCCTTTTCATTTCTGATTTTGTTAA  529

seq1  TTTGGATACTGTCTCTGTGCGCCCTGGTTAGTCTGGCTAAGGGTTTATCT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGATACTGTCTCTGTGCGCCCTGGTTAGTCTGGCTAAGGGTTTATCT  579

seq1  ATCTTGTTGATTTTCTCAAGGAACCAGCTCCTGGTTTTGTTGATTCTTTA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTTGATTTTCTCAAGGAACCAGCTCCTGGTTTTGTTGATTCTTTA  629

seq1  TATTTATATTTATATTGTTTCTACTTGATTGATTTCAGCCTTGAGTTTGA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATATTTATATTGTTTCTACTTGATTGATTTCAGCCTTGAGTTTGA  679

seq1  ATGAAAACACAGACATCTATGTTCTTTGAAATAAGATGAGCTGAGTTGCT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAACACAGACATCTATGTTCTTTGAAATAAGATGAGCTGAGTTGCT  729

seq1  GTCATGTTGGAAGAACTTATGAATATTGGATGAAATTATTGCCAGTGCAA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGTTGGAAGAACTTATGAATATTGGATGAAATTATTGCCAGTGCAA  779

seq1  CCAATATTCAGTACAATGTGGGTGGCAGTGACTGAGAATACCATTCGCAC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATATTCAGTACAATGTGGGTGGCAGTGACTGAGAATACCATTCGCAC  829

seq1  ACTAGTGACAGAGAGATCTTGAGCCATTCAGAGTACGATTTTGCTGATGG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTGACAGAGAGATCTTGAGCCATTCAGAGTACGATTTTGCTGATGG  879

seq1  GACTTGTTCATTAATTACGTCAACATACTGGAGACTGAGGTCTTCAACTC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGTTCATTAATTACGTCAACATACTGGAGACTGAGGTCTTCAACTC  929

seq1  CGACCCACAGAGAAGCACAACTCTGTTCTGATATTCACAGGTTTGTTTAA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACCCACAGAGAAGCACAACTCTGTTCTGATATTCACAGGTTTGTTTAA  979

seq1  TAGTAATTCTAAAGTTGACACTCTCCACTCAGATTCACTGAACTATGTTA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAATTCTAAAGTTGACACTCTCCACTCAGATTCACTGAACTATGTTA  1029

seq1  CATGAACTGTACTACAGTGTAGTTCTCTCACATTCTGGCATACAGGAATA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAACTGTACTACAGTGTAGTTCTCTCACATTCTGGCATACAGGAATA  1079

seq1  TTCCTAATCCACAATCTATAGAATACTGAGGCATCCTATATGAAAACATG  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAATCCACAATCTATAGAATACTGAGGCATCCTATATGAAAACATG  1129

seq1  TTTCAAGATGATGAGATGAATTTATCCTTGGAGAATTC  1178
      ||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGATGATGAGATGAATTTATCCTTGGAGAATTC  1167