BAC Information

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BAC

Clone NameB6Ng01-212J10
Chromosome15 (Build37)
Map Location 76,363,940 - 76,573,576
singlet/doubletdoublet
Overlap geneEG666504, Fbxl6, Gpr172b, Adck5, Cpsf1, Slc39a4, Vps28, Nfkbil2, Cyhr1, Kifc2, Foxh1, Ppp1r16a, Gpt1, Mfsd3, Recql4, Lrrc14, Lrrc24, C030006K11Rik, D15Wsu169e
Upstream geneLy6h, Gpihbp1, Zfp41, 2810039B14Rik, Top1mt, Rhpn1, Mafa, Zc3h3, LOC672572, Gsdmdc1, Naprt1, Eef1d, Tigd5, Pycrl, Tsta3, Zfp623, Eif2s3x-ps1, Zfp707, 2410075B13Rik, Mapk15, AA409316, K230010J24Rik, Scrib, 2410104I19Rik, Nrbp2, Eppk1, BC024139, Plec1, LOC671535, Grina, Spatc1, LOC100041269, Oplah, Exosc4, Gpaa1, Cyc1, Sharpin, Maf1, EG626280, Brp16, Tssk5, Bop1, Scx, Hsf1, Dgat1, Scrt1, LOC666497
Downstream geneZfp251, Zfp7, Commd5, Rpl8, Zfp647, 1110038F14Rik, Mb, Apol6, Rbm9, LOC100042318, Apol3, BC020489, BC085284, LOC624454, EG666639, 9030421J09Rik, EG626615, 2210421G13Rik, 9130218O11Rik, LOC666661, A330102K04Rik, EG545115, LOC666348, LOC666679, 2310016F22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212J10.bB6Ng01-212J10.g
ACCGA030346GA030347
length1,228260
definitionB6Ng01-212J10.b B6Ng01-212J10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,572,382 - 76,573,576)(76,363,940 - 76,364,199)
sequence
gaattcataccacctactgtccaggaggaatgcaggtatcccctgtcggc
agatgctcacattcggatcttaggatcaaaatgaggagagttaaaagtgg
aggagtttgctccatttggcaggattaacactatataccatgaaaattct
ctagcattcagaggctctttcaacagtactacatatgccggttcagaaat
ctgctgttttgcctagagccaaggaatcgaacaaagaaatttaagccgca
tctcattcacatccaggctaaagtgtgatctaaggaatgaatgaggtgtg
tgcaaatggaatgcaggtcgtaaaagacattagggtacttgtgatccttc
tataatttaactattcaagattatatataatatgaaattttcctaatgat
tttttttttttttgagacagggtttctctgtgtagccctaactgtcctgg
aactcactctgaagatcaggttggcctcgaactcagaatcgcttgcctct
gcctccggagtactgggattaaaggcgtgcaccaccaccgcccggcttgt
tctttaacttttaagtgaaggctaggaggctacaagtctccattaatact
actagtaactttttgttttagctttttaagactgacatctagactgggta
taacggtgcacaccttgaatcccaacccgggaggcagaggcagaaggagc
tcagtgagtctgaagtcagcaggtccgcatggtgaggccctgtctcaaag
caataaagactgaaagcagccagtgcccctctatctatgcatttagcagc
tgttccaaaatggtcttaccctctggcagcaagcgttctacactagcatc
cttggctctctgccttctcttactgagtggtgtaaaagcccagggttcag
tagagaatagtccctcatcagactaaatcaatcctttccttccagactac
gggagtttccttctctcagctacaagtaggtggtcagttttggcatctgc
ctcctgggaatagctgacaaggataatcacctatttaagataccccacct
ttctgatattctcttagatgttctttttgtcttgccctcagaaaccttta
cggttccccagaaagagtctcattgagcatggtctctctggttttctgcc
atactctggatttaagctctcatgactccactctctgagatccctttaaa
cgagggcgctgaacatcctaggacaggg
catttgctatgaataagggagtggcagccagttctccgttctccggataa
gagaatccccaccagcatgctctttaggtatcccttccccttaacggggg
tgtatcctcaccccacccctgcccagaattcccagcgctcctgctgccct
taacatagtggaggtctcaggagtactatatttaccctctgagtgcaaaa
cagccccatccaagagctgcaaacagtagtatctttttgtcaggggggtg
gggtggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_76572382_76573576
seq2: B6Ng01-212J10.b_43_1270 (reverse)

seq1  CCCTGTCCTAGAATG-TCAGC-CACT-GTTCTAAGGG--CTCAGAGA-TG  44
      ||||||||||| ||| ||||| | || |||  |||||  |||||||| ||
seq2  CCCTGTCCTAGGATGTTCAGCGCCCTCGTTTAAAGGGATCTCAGAGAGTG  50

seq1  GAGCTACTGAGAGCTTTAAT-CAGA-TATGGCAGAAAACCAGAGAAGACA  92
      ||| |  ||||||||| ||| |||| |||||||||||||||||||   ||
seq2  GAG-TCATGAGAGCTTAAATCCAGAGTATGGCAGAAAACCAGAGAGACCA  99

seq1  TGCTACAA--AGACTC-TTCTGGGG-ACTGTAATG--TTCTGAGGGC-AG  135
      |||| |||  |||||| |||||||| || |||| |  |||||||||| ||
seq2  TGCT-CAATGAGACTCTTTCTGGGGAACCGTAAAGGTTTCTGAGGGCAAG  148

seq1  ACAAAAAG-ACATCTAGGAG-ATATCAGAA--GT-GGGTATC-TAAATA-  178
      |||||||| ||||||| ||| |||||||||  || ||||||| |||||| 
seq2  ACAAAAAGAACATCTAAGAGAATATCAGAAAGGTGGGGTATCTTAAATAG  198

seq1  GTGATTATCCTTGTCAGCTAT--CCAAGAGGCAGGTGGCCAAACTGA-CA  225
      |||||||||||||||||||||  ||| ||||||| || | ||||||| ||
seq2  GTGATTATCCTTGTCAGCTATTCCCAGGAGGCAGATGCCAAAACTGACCA  248

seq1  CCTACTTGTGACT--GAGAAGG-AACTTCCGTAGTCTGGAAGGAAA-GAT  271
      |||||||||  ||  ||||||| |||| |||||||||||||||||| |||
seq2  CCTACTTGTAGCTGAGAGAAGGAAACTCCCGTAGTCTGGAAGGAAAGGAT  298

seq1  TGATTTAGTCTGATGA-GGACTA-TCTCTACTGAACCCT-GGCTTTTACA  318
      |||||||||||||||| |||||| ||||||||||||||| ||||||||||
seq2  TGATTTAGTCTGATGAGGGACTATTCTCTACTGAACCCTGGGCTTTTACA  348

seq1  CCACTCAGTAAGAGAAGGCAGAGAGCC-AGGATGCTAGTGTAG-ACGCTT  366
      ||||||||||||||||||||||||||| ||||||||||||||| ||||||
seq2  CCACTCAGTAAGAGAAGGCAGAGAGCCAAGGATGCTAGTGTAGAACGCTT  398

seq1  GCTGCCAGAGGGTAAGACCATTTTGGAACAGCTGCT-AATGCATAGATAG  415
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GCTGCCAGAGGGTAAGACCATTTTGGAACAGCTGCTAAATGCATAGATAG  448

seq1  AGGGGCACTGGCTGCTTTCAGTCTTTATTGCTTTGAGACAGGGCCTCACC  465
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCACTGGCTGCTTTCAGTCTTTATTGCTTTGAGACAGGGCCTCACC  498

seq1  ATGCGGACCTGCTGACTTCAGACTCACTGAGCTCCTTCTGCCTCTGCCTC  515
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGGACCTGCTGACTTCAGACTCACTGAGCTCCTTCTGCCTCTGCCTC  548

seq1  CCGGGTTGGGATTCAAGGTGTGCACCGTTATACCCAGTCTAGATGTCAGT  565
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGTTGGGATTCAAGGTGTGCACCGTTATACCCAGTCTAGATGTCAGT  598

seq1  CTTAAAAAGCTAAAACAAAAAGTTACTAGTAGTATTAATGGAGACTTGTA  615
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAAAGCTAAAACAAAAAGTTACTAGTAGTATTAATGGAGACTTGTA  648

seq1  GCCTCCTAGCCTTCACTTAAAAGTTAAAGAACAAGCCGGGCGGTGGTGGT  665
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCTAGCCTTCACTTAAAAGTTAAAGAACAAGCCGGGCGGTGGTGGT  698

seq1  GCACGCCTTTAATCCCAGTACTCCGGAGGCAGAGGCAAGCGATTCTGAGT  715
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGCCTTTAATCCCAGTACTCCGGAGGCAGAGGCAAGCGATTCTGAGT  748

seq1  TCGAGGCCAACCTGATCTTCAGAGTGAGTTCCAGGACAGTTAGGGCTACA  765
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGGCCAACCTGATCTTCAGAGTGAGTTCCAGGACAGTTAGGGCTACA  798

seq1  CAGAGAAACCCTGTCTCAAAAAAAAAAAAAATCATTAGGAAAATTTCATA  815
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAACCCTGTCTCAAAAAAAAAAAAAATCATTAGGAAAATTTCATA  848

seq1  TTATATATAATCTTGAATAGTTAAATTATAGAAGGATCACAAGTACCCTA  865
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATATAATCTTGAATAGTTAAATTATAGAAGGATCACAAGTACCCTA  898

seq1  ATGTCTTTTACGACCTGCATTCCATTTGCACACACCTCATTCATTCCTTA  915
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTTTACGACCTGCATTCCATTTGCACACACCTCATTCATTCCTTA  948

seq1  GATCACACTTTAGCCTGGATGTGAATGAGATGCGGCTTAAATTTCTTTGT  965
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACACTTTAGCCTGGATGTGAATGAGATGCGGCTTAAATTTCTTTGT  998

seq1  TCGATTCCTTGGCTCTAGGCAAAACAGCAGATTTCTGAACCGGCATATGT  1015
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATTCCTTGGCTCTAGGCAAAACAGCAGATTTCTGAACCGGCATATGT  1048

seq1  AGTACTGTTGAAAGAGCCTCTGAATGCTAGAGAATTTTCATGGTATATAG  1065
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTGTTGAAAGAGCCTCTGAATGCTAGAGAATTTTCATGGTATATAG  1098

seq1  TGTTAATCCTGCCAAATGGAGCAAACTCCTCCACTTTTAACTCTCCTCAT  1115
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATCCTGCCAAATGGAGCAAACTCCTCCACTTTTAACTCTCCTCAT  1148

seq1  TTTGATCCTAAGATCCGAATGTGAGCATCTGCCGACAGGGGATACCTGCA  1165
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATCCTAAGATCCGAATGTGAGCATCTGCCGACAGGGGATACCTGCA  1198

seq1  TTCCTCCTGGACAGTAGGTGGTATGAATTC  1195
      ||||||||||||||||||||||||||||||
seq2  TTCCTCCTGGACAGTAGGTGGTATGAATTC  1228

seq1: chr15_76363940_76364199
seq2: B6Ng01-212J10.g_74_333

seq1  CATTTGCTATGAATAAGGGAGTGGCAGCCAGTTCTCCGTTCTCCGGATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCTATGAATAAGGGAGTGGCAGCCAGTTCTCCGTTCTCCGGATAA  50

seq1  GAGAATCCCCACCAGCATGCTCTTTAGGTATCCCTTCCCCTTAACGGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCCCCACCAGCATGCTCTTTAGGTATCCCTTCCCCTTAACGGGGG  100

seq1  TGTATCCTCACCCCACCCCTGCCCAGAATTCCCAGCGCTCCTGCTGCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCCTCACCCCACCCCTGCCCAGAATTCCCAGCGCTCCTGCTGCCCT  150

seq1  TAACATAGTGGAGGTCTCAGGAGTACTATATTTACCCTCTGAGTGCAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATAGTGGAGGTCTCAGGAGTACTATATTTACCCTCTGAGTGCAAAA  200

seq1  CAGCCCCATCCAAGAGCTGCAAACAGTAGTATCTTTTTGTCAGGGGGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCCATCCAAGAGCTGCAAACAGTAGTATCTTTTTGTCAGGGGGGTG  250

seq1  GGGTGGGGAG  260
      ||||||||||
seq2  GGGTGGGGAG  260