BAC Information

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BAC

Clone NameB6Ng01-214A20
Chromosome15 (Build37)
Map Location 81,605,669 - 81,734,872
singlet/doubletdoublet
Overlap geneZc3h7b, Tef, LOC667073, Tob2, Phf5a, Aco2
Upstream geneTnrc6b, Adsl, LOC625672, Rutbc3, Mkl1, LOC675966, Mchr1, Slc25a17, St13, Xpnpep3, Dnajb7, Rbx1, EG383080, Ep300, L3mbtl2, Rangap1
Downstream genePolr3h, Csdc2, Pmm1, EG545121, 1700029P11Rik, D15Wsu75e, Xrcc6, Nhp2l1, 4930407I10Rik, Mei1, Ccdc134, Srebf2, LOC435145, Tnfrsf13c, Cenpm, 1500009C09Rik, Sept3, Wbp2nl, Naga, C920005C14Rik, 1500032L24Rik, Ndufa6, Cyp2d22, LOC545123, Cyp2d10, Cyp2d9, EG545124, EG667196, EG667177, 9030605E09Rik, BC018285, Cyp2d13, LOC380998, LOC627860, LOC676200, 1300013D18Rik, LOC271300, Cyp2d26, Tcf20
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214A20.bB6Ng01-214A20.g
ACCGA031406GA031407
length1,1701,074
definitionB6Ng01-214A20.b B6Ng01-214A20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,733,729 - 81,734,872)(81,605,669 - 81,606,745)
sequence
gaattctgccctctcagtcacaccagggtcctacgtaagtaattcttgga
gtctgaacaataacaatgaaataaattaggtatagaacatatgaaataca
gatatgaggactgcttgaactcaggaggattttggttttttttttcaaga
cagggtttctctgtgtagccctggctgtcctggaactcactctgtagacc
aggctgatcttgaactcacatctgcctgcctctgcctccctggtgctggg
attttacagtagttttcagttgttccatcagttcagcaggttgtttctag
cctgacccccacctctgcgtatctattctcagcccacactgttgggaccg
cctcaggggaagaccaccttaactactgcttcaggtccatgagctgaagc
tcggaggtagagacactgtggggctgccatcctcaccagtgcaggagatg
gaatcgacaccgggtccgtggtattccacaatagcacctgtgccaccttt
caccgtgaggatacctgccactttcaggatcacatctttgggtgaggtcc
aaccagagagggagcctgtcagcttcacaccgatcacctgaaacagtggg
ctagacaagtacaggcactacacaccacacaccacatccaaggaggaatc
acgtaatggagcttatattcccttgtattcttcttcagtcctactcctca
caaaagagaatctagcctggctcttccatcccatacccacagttccttat
gtattcccaccagcctcccttctagctaggctagaacaagtttttccctt
cccctcaccttgggacactttcagctcccaggggatcccagccatgacat
ccacagcatcagcaccccctactccaaatgcagatgcctcccagggccac
caccattggggggtgtgcgaatcagtggccgatcagaagaacctccaagg
gtatgcaatagtttttctaagaatgatctgaaaaaagaaccaaaggatct
taagccttaagaaggtcctccagaaacagaatttgaagttggaccctaaa
aaaagggaatacatagaactacccccaactggacacagaccacccagccc
atgcccaggtaattccttcaaggaatggggtaccggcagccctcggttag
aactacatctactatccagg
gaattctgttctgtctttgcaatggggatggacttcccacctaagatgac
gttctccttggagggagattagcttcctgtgaggctgggggctgagccgg
ggaggggggggcacacattcctctaagaaaccatctgtagtgtggaaggc
ctggtaaaatccttgtcactacctttaatcccagcaattgggaggcagag
gcaggtggatctccgagttcaaggccagccttatctatatagtgaatttc
agggcacccagggcttttgagaccctgtttcaaaaacaaaaccaaaagag
cccaaaaccctctctcgcctcagggcatggataagactctacccttttcc
aggtacctcagaggtgtacccctgccctggggccattgctcccctgaaat
gtacctaccaagctagtttaccccacccctgtctcagcccacgcctgctc
ggaccctggctgaaaagccagcctacctgtgataggcagtcgttccccag
tgagtggccctcagtgtaccctggtggaaatgtgaggccattccacccta
catctttcctctcacagggaacttctaacggattgggatctatagatgac
atcgaaacaggtatgtctcagctgtgtggggtgagacaccgggagggctt
ccctgaggcaggccaggaacgagcacggcttcctcctcagcttgtctccg
tccttcattcatgcctgtccgtgtcggacaccttgtgttagaaccctcac
ttcctacttccttttctctgctcgagtaataagtgcttgaagaaggcact
gctggtcccagagaaaggtgacattggtgggtatttgaggagtgccaagg
gcaatcagaaccctttccacagcttcaggctgtctttcctccttgactac
ctctgagcaattgcccctggggcagggaatagggacccagatccttgtgg
aatgggaagagggaaggcgttagcttagtgactgggcacacccccatcac
acgggctcttttcagcttcgagctcacctccctccacagactgctacgtg
gatctcgaggctcccagcctgctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_81733729_81734872
seq2: B6Ng01-214A20.b_44_1213 (reverse)

seq1  CCTGGATATGTAGATGTAG-TCTAACTGA-GGCTGCCCGTACCCCA-TAC  47
      |||||||| |||||||||| |||||| || ||||||| |||||||| | |
seq2  CCTGGATA-GTAGATGTAGTTCTAACCGAGGGCTGCCGGTACCCCATTCC  49

seq1  TTGAAG--AATACCTGGGCAT-GGCTGGGTGGTCTGGTGT-CAG-TGGGG  92
      ||||||  | ||||||||||| ||||||||||||| |||| ||| |||||
seq2  TTGAAGGAATTACCTGGGCATGGGCTGGGTGGTCT-GTGTCCAGTTGGGG  98

seq1  GTAGTTCTATGTAT--CCTTTTTTTGGGGTCCAACTTC-AATTCTG-TTC  138
      ||||||||||||||  ||||||||| |||||||||||| ||||||| |||
seq2  GTAGTTCTATGTATTCCCTTTTTTTAGGGTCCAACTTCAAATTCTGTTTC  148

seq1  TGAAG--ACTTCT--AAGCTTAAGAT-CTTTGGTTC-TTTTTCAGATCAT  182
      || ||   |||||  | ||||||||| ||||||||| |||||||||||||
seq2  TGGAGGACCTTCTTAAGGCTTAAGATCCTTTGGTTCTTTTTTCAGATCAT  198

seq1  TC-TAG-AAAACTA-TGCATACCC-TGGA-GTTCTTCTGATCGG-CACTG  226
      || ||| ||||||| ||||||||| |||| |||||||||||||| |||||
seq2  TCTTAGAAAAACTATTGCATACCCTTGGAGGTTCTTCTGATCGGCCACTG  248

seq1  ATTCGCACA-CCCCCAATGGTGGTGG-CCTGGGAGGCATCTGCA-TTGGA  273
      ||||||||| |||||||||||||||| ||||||||||||||||| |||||
seq2  ATTCGCACACCCCCCAATGGTGGTGGCCCTGGGAGGCATCTGCATTTGGA  298

seq1  GTAGGGGGTGCTGATGCTGTGGATGTCATGGCTGGGATCCCCTGGGAGCT  323
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGGGTGCTGATGCTGTGGATGTCATGGCTGGGATCCCCTGGGAGCT  348

seq1  G-AAGTGTCCCAAGGTGAGGGGAAGGGAAAAACTTGTTCTAGCCTAGCTA  372
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGTCCCAAGGTGAGGGGAAGGGAAAAACTTGTTCTAGCCTAGCTA  398

seq1  GAAGGGAGGCTGGTGGGAATACATAAGGAACTGTGGGTATGGGATGGAAG  422
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGAGGCTGGTGGGAATACATAAGGAACTGTGGGTATGGGATGGAAG  448

seq1  AGCCAGGCTAGATTCTCTTTTGTGAGGAGTAGGACTGAAGAAGAATACAA  472
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGCTAGATTCTCTTTTGTGAGGAGTAGGACTGAAGAAGAATACAA  498

seq1  GGGAATATAAGCTCCATTACGTGATTCCTCCTTGGATGTGGTGTGTGGTG  522
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATATAAGCTCCATTACGTGATTCCTCCTTGGATGTGGTGTGTGGTG  548

seq1  TGTAGTGCCTGTACTTGTCTAGCCCACTGTTTCAGGTGATCGGTGTGAAG  572
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTGCCTGTACTTGTCTAGCCCACTGTTTCAGGTGATCGGTGTGAAG  598

seq1  CTGACAGGCTCCCTCTCTGGTTGGACCTCACCCAAAGATGTGATCCTGAA  622
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGGCTCCCTCTCTGGTTGGACCTCACCCAAAGATGTGATCCTGAA  648

seq1  AGTGGCAGGTATCCTCACGGTGAAAGGTGGCACAGGTGCTATTGTGGAAT  672
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCAGGTATCCTCACGGTGAAAGGTGGCACAGGTGCTATTGTGGAAT  698

seq1  ACCACGGACCCGGTGTCGATTCCATCTCCTGCACTGGTGAGGATGGCAGC  722
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACGGACCCGGTGTCGATTCCATCTCCTGCACTGGTGAGGATGGCAGC  748

seq1  CCCACAGTGTCTCTACCTCCGAGCTTCAGCTCATGGACCTGAAGCAGTAG  772
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGTGTCTCTACCTCCGAGCTTCAGCTCATGGACCTGAAGCAGTAG  798

seq1  TTAAGGTGGTCTTCCCCTGAGGCGGTCCCAACAGTGTGGGCTGAGAATAG  822
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGTGGTCTTCCCCTGAGGCGGTCCCAACAGTGTGGGCTGAGAATAG  848

seq1  ATACGCAGAGGTGGGGGTCAGGCTAGAAACAACCTGCTGAACTGATGGAA  872
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGCAGAGGTGGGGGTCAGGCTAGAAACAACCTGCTGAACTGATGGAA  898

seq1  CAACTGAAAACTACTGTAAAATCCCAGCACCAGGGAGGCAGAGGCAGGCA  922
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGAAAACTACTGTAAAATCCCAGCACCAGGGAGGCAGAGGCAGGCA  948

seq1  GATGTGAGTTCAAGATCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCC  972
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGAGTTCAAGATCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCC  998

seq1  AGGGCTACACAGAGAAACCCTGTCTTGAAAAAAAAAACCAAAATCCTCCT  1022
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTACACAGAGAAACCCTGTCTTGAAAAAAAAAACCAAAATCCTCCT  1048

seq1  GAGTTCAAGCAGTCCTCATATCTGTATTTCATATGTTCTATACCTAATTT  1072
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCAAGCAGTCCTCATATCTGTATTTCATATGTTCTATACCTAATTT  1098

seq1  ATTTCATTGTTATTGTTCAGACTCCAAGAATTACTTACGTAGGACCCTGG  1122
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTGTTATTGTTCAGACTCCAAGAATTACTTACGTAGGACCCTGG  1148

seq1  TGTGACTGAGAGGGCAGAATTC  1144
      ||||||||||||||||||||||
seq2  TGTGACTGAGAGGGCAGAATTC  1170

seq1: chr15_81605669_81606745
seq2: B6Ng01-214A20.g_65_1138

seq1  GAATTCTGTTCTGTCTTTGCAATGGGGATGGACTTCCCACCTAAGATGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTCTGTCTTTGCAATGGGGATGGACTTCCCACCTAAGATGAC  50

seq1  GTTCTCCTTGGAGGGAGATTAGCTTCCTGTGAGGCTGGGGGCTGAGCCGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCCTTGGAGGGAGATTAGCTTCCTGTGAGGCTGGGGGCTGAGCCGG  100

seq1  GGAGGGGGGGGCACACATTCCTCTAAGAAACCATCTGTAGTGTGGAAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGGGGGGCACACATTCCTCTAAGAAACCATCTGTAGTGTGGAAGGC  150

seq1  CTGGTAAAATCCTTGTCACTACCTTTAATCCCAGCAATTGGGAGGCAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAAAATCCTTGTCACTACCTTTAATCCCAGCAATTGGGAGGCAGAG  200

seq1  GCAGGTGGATCTCCGAGTTCAAGGCCAGCCTTATCTATATAGTGAATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTGGATCTCCGAGTTCAAGGCCAGCCTTATCTATATAGTGAATTTC  250

seq1  AGGGCACCCAGGGCTTTTGAGACCCTGTTTCAAAAACAAAACCAAAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCACCCAGGGCTTTTGAGACCCTGTTTCAAAAACAAAACCAAAAGAG  300

seq1  CCCAAAACCCTCTCTCGCCTCAGGGCATGGATAAGACTCTACCCTTTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAACCCTCTCTCGCCTCAGGGCATGGATAAGACTCTACCCTTTTCC  350

seq1  AGGTACCTCAGAGGTGTACCCCTGCCCTGGGGCCATTGCTCCCCTGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACCTCAGAGGTGTACCCCTGCCCTGGGGCCATTGCTCCCCTGAAAT  400

seq1  GTACCTACCAAGCTAGTTTACCCCACCCCTGTCTCAGCCCACGCCTGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTACCAAGCTAGTTTACCCCACCCCTGTCTCAGCCCACGCCTGCTC  450

seq1  GGACCCTGGCTGAAAAGCCAGCCTACCTGTGATAGGCAGTCGTTCCCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCTGGCTGAAAAGCCAGCCTACCTGTGATAGGCAGTCGTTCCCCAG  500

seq1  TGAGTGGCCCTCAGTGTACCCTGGTGGAAATGTGAGGCCATTCCACCCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGGCCCTCAGTGTACCCTGGTGGAAATGTGAGGCCATTCCACCCTA  550

seq1  CATCTTTCCTCTCACAGGGAACTTCTAACGGATTGGGATCTATAGATGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTCCTCTCACAGGGAACTTCTAACGGATTGGGATCTATAGATGAC  600

seq1  ATCGAAACAGGTATGTCTCAGCTGTGTGGGGTGAGACACCGGGAGGGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGAAACAGGTATGTCTCAGCTGTGTGGGGTGAGACACCGGGAGGGCTT  650

seq1  CCCTGAGGCAGGCCAGGAACGAGCACGGCTTCCTCCTCAGCTTGTCTCCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGGCAGGCCAGGAACGAGCACGGCTTCCTCCTCAGCTTGTCTCCG  700

seq1  TCCTTCATTCATGCCTGTCCGTGTCGGACACCTTGTGTTAGAACCCTCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCATTCATGCCTGTCCGTGTCGGACACCTTGTGTTAGAACCCTCAC  750

seq1  TTCCTACTTCCTTTTCTCTGCTCGAGTAATAAGTGCTTGAAGAAGGCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTACTTCCTTTTCTCTGCTCGAGTAATAAGTGCTTGAAGAAGGCACT  800

seq1  GCTGGTCCCAGAGAAAGGTGACATTGGTGGGTATTTGAGGAGTGCCAA-G  849
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCTGGTCCCAGAGAAAGGTGACATTGGTGGGTATTTGAGGAGTGCCAAGG  850

seq1  GCAATCAGAACCC-TTCCACAGCTTCAGGCTGTCTTTCCTCCTTGACTAC  898
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GCAATCAGAACCCTTTCCACAGCTTCAGGCTGTCTTTCCTCCTTGACTAC  900

seq1  CTCTGAGCCATTGCCCCTGGGGCAGGGAATAGGGAACCCAGATCCTTGTG  948
      |||||||| ||||||||||||||||||||||||| |||||||||||||||
seq2  CTCTGAGCAATTGCCCCTGGGGCAGGGAATAGGG-ACCCAGATCCTTGTG  949

seq1  GAATGGGAAGAAGGGAAGGCGTTAGCTTAGTGACTGGGCAACACCCCCAC  998
      |||||||||| |||||||||||||||||||||||||||| ||||||||| 
seq2  GAATGGGAAG-AGGGAAGGCGTTAGCTTAGTGACTGGGC-ACACCCCCAT  997

seq1  CACACGGGCTCCTTTCAGCTCTGAGCTCA-CTCCCTCCACAGACTGCTAC  1047
      ||||||||||| ||||||||  ||||||| ||||||||||||||||||||
seq2  CACACGGGCTCTTTTCAGCTTCGAGCTCACCTCCCTCCACAGACTGCTAC  1047

seq1  GTGGATCTCCGAGGCTCCCCAGCCCTGCTC  1077
      |||||||| ||||||| ||||| |||||||
seq2  GTGGATCT-CGAGGCT-CCCAG-CCTGCTC  1074