BAC Information

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BAC

Clone NameB6Ng01-215A11
Chromosome15 (Build37)
Map Location 55,277,449 - 55,278,605
singlet/doubletsinglet
Overlap geneCol14a1
Upstream geneColec10, Mal2, Nov, LOC665302, LOC100039816, Enpp2, LOC100039911, LOC100039822, Taf2, 2600005O03Rik, Depdc6
Downstream geneMrpl13, Mtbp, Sntb1, LOC665348, LOC100039908, Hba-ps3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215A11.b
ACCGA032117
length1,167
definitionB6Ng01-215A11.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ttaatgtacaatttcattatgtgagaaatattccatcatccccccaaaga
aattttccattaaaaaaagtaataaagctaagccccagttgatacattag
cccaaatgtttctcatttgagtaacgtatttacagttgcatacttttaat
atttattctgacttgtcccaagacatccatcatcagggagagagtagtgg
ctacacggctgctgatgcagctcagctgtctttcagttcagggctcagcc
catgaaatagtgccactcataagcaacataggctctcccacctccattaa
tccaactaagaaatctatcacaggcaggcccgagggccaacctgatctag
acattctctcattgagatgagactccctctctaggtgattctagagtttg
tcaaatccataattcaaacaaatcatcacacatatatcatataacagaac
cttcacaaccatcctgtgagaacatttattttacagattaggagacagcc
ctttatagttgtcctttcaatactattgtaacttgttgctgctgttccct
agacaagaaaccttgctgtagcaaatcacagcattttctttaataaaagc
acctaattacagaattgtcaaggcatgtgatttttttgaaatctgcatta
tccactaggggatatttaattaagcagataggaatgtgtgcttaaagcca
gaattgttctcggtagccatgatgatatatatatatatatatatgaacct
taccatctgcctgcatctccctggagattttgtttgacatcatcttgtga
ccgtccatcagttatcaccacgatgacctttgggatgcctctccttgtcc
ctgagtctgatgtaaataaggtatcccgaacatgcttgatagcttttcct
gaaacaaagaatcgacacctccatttcactccttcacaatgctttctcca
aggtgaaaaagagtggggtgggtcagtcttgtcacatcaatgaaagccat
tgaaaatttacgtgtcctggggagctaaggctgcaacacaaagggccagg
tacctgtgatggcgttgtgtggaggccctgggattcacactggatgtcca
aaaacaaatcagcaagctcgtgacaaagtcacgctcaaattctatgatca
ctgtcagaattcactgg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_55277449_55278605
seq2: B6Ng01-215A11.b_54_1220 (reverse)

seq1  CCAGTGAAATCTGACAGTGATCATAAGGAATTTGAGCGTGACTTTGTCAC  50
      |||||||| ||||||||||||||||  |||||||||||||||||||||||
seq2  CCAGTGAATTCTGACAGTGATCATA--GAATTTGAGCGTGACTTTGTCAC  48

seq1  GAGCCTGGCTGATTTGTTTT--GGCATCAAGTGTGGAATCCAGGGCCT-C  97
      ||| || |||||||||||||  | |||| |||||| |  ||||||||| |
seq2  GAG-CTTGCTGATTTGTTTTTGGACATCCAGTGTGAATCCCAGGGCCTCC  97

seq1  ACAC-ACG-CATCACAGGTACCTTGCCC-TTGTGTTGCAGCCTTAGCT-C  143
      |||| ||| |||||||||||||| |||| ||||||||||||||||||| |
seq2  ACACAACGCCATCACAGGTACCTGGCCCTTTGTGTTGCAGCCTTAGCTCC  147

seq1  CCAGGACACGT-AATTTTCAATGGCTTTCATTGATGTGACAAGGCTGACC  192
      ||||||||||| ||||||||||||||||||||||||||||||| ||||||
seq2  CCAGGACACGTAAATTTTCAATGGCTTTCATTGATGTGACAAGACTGACC  197

seq1  CA-CCCACTC-TTTTCACC-TGGAGAAAGCA-TGTGAAGGAGTGAAATGG  238
      || ||||||| |||||||| ||||||||||| ||||||||||||||||||
seq2  CACCCCACTCTTTTTCACCTTGGAGAAAGCATTGTGAAGGAGTGAAATGG  247

seq1  AGGTGTCGATTCTTTGTTTCAGGAAAAGCTATCAAGCATGTTCGGGATAC  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTCGATTCTTTGTTTCAGGAAAAGCTATCAAGCATGTTCGGGATAC  297

seq1  CTTATTTACATCAGACTCAGGGACAAGGAGAGGCATCCCAAAGGTCATCG  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTACATCAGACTCAGGGACAAGGAGAGGCATCCCAAAGGTCATCG  347

seq1  TGGTGATAACTGATGGACGGTCACAAGATGATGTC-AACAAAATCTCCAG  387
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGGTGATAACTGATGGACGGTCACAAGATGATGTCAAACAAAATCTCCAG  397

seq1  GGAGATGCAGGCAGATGGTAAGGTTCATATATATATATATATATATCATC  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATGCAGGCAGATGGTAAGGTTCATATATATATATATATATATCATC  447

seq1  ATGGCTACCGAGAACAATTCTGGCTTTAAGCACACATTCCTATCTGCTTA  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTACCGAGAACAATTCTGGCTTTAAGCACACATTCCTATCTGCTTA  497

seq1  ATTAAATATCCCCTAGTGGATAATGCAGATTTCAAAAAAATCACATGCCT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATATCCCCTAGTGGATAATGCAGATTTCAAAAAAATCACATGCCT  547

seq1  TGACAATTCTGTAATTAGGTGCTTTTATTAAAGAAAATGCTGTGATTTGC  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATTCTGTAATTAGGTGCTTTTATTAAAGAAAATGCTGTGATTTGC  597

seq1  TACAGCAAGGTTTCTTGTCTAGGGAACAGCAGCAACAAGTTACAATAGTA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCAAGGTTTCTTGTCTAGGGAACAGCAGCAACAAGTTACAATAGTA  647

seq1  TTGAAAGGACAACTATAAAGGGCTGTCTCCTAATCTGTAAAATAAATGTT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGGACAACTATAAAGGGCTGTCTCCTAATCTGTAAAATAAATGTT  697

seq1  CTCACAGGATGGTTGTGAAGGTTCTGTTATATGATATATGTGTGATGATT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGGATGGTTGTGAAGGTTCTGTTATATGATATATGTGTGATGATT  747

seq1  TGTTTGAATTATGGATTTGACAAACTCTAGAATCACCTAGAGAGGGAGTC  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGAATTATGGATTTGACAAACTCTAGAATCACCTAGAGAGGGAGTC  797

seq1  TCATCTCAATGAGAGAATGTCTAGATCAGGTTGGCCCTCGGGCCTGCCTG  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTCAATGAGAGAATGTCTAGATCAGGTTGGCCCTCGGGCCTGCCTG  847

seq1  TGATAGATTTCTTAGTTGGATTAATGGAGGTGGGAGAGCCTATGTTGCTT  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGATTTCTTAGTTGGATTAATGGAGGTGGGAGAGCCTATGTTGCTT  897

seq1  ATGAGTGGCACTATTTCATGGGCTGAGCCCTGAACTGAAAGACAGCTGAG  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTGGCACTATTTCATGGGCTGAGCCCTGAACTGAAAGACAGCTGAG  947

seq1  CTGCATCAGCAGCCGTGTAGCCACTACTCTCTCCCTGATGATGGATGTCT  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATCAGCAGCCGTGTAGCCACTACTCTCTCCCTGATGATGGATGTCT  997

seq1  TGGGACAAGTCAGAATAAATATTAAAAGTATGCAACTGTAAATACGTTAC  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACAAGTCAGAATAAATATTAAAAGTATGCAACTGTAAATACGTTAC  1047

seq1  TCAAATGAGAAACATTTGGGCTAATGTATCAACTGGGGCTTAGCTTTATT  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGAGAAACATTTGGGCTAATGTATCAACTGGGGCTTAGCTTTATT  1097

seq1  ACTTTTTTTAATGGAAAATTTCTTTGGGGGGATGATGGAATATTTCTCAC  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTTTAATGGAAAATTTCTTTGGGGGGATGATGGAATATTTCTCAC  1147

seq1  ATAATGAAATTGTACATTAA  1157
      ||||||||||||||||||||
seq2  ATAATGAAATTGTACATTAA  1167