BAC Information

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BAC

Clone NameB6Ng01-215H16
Chromosome15 (Build37)
Map Location 7,840,034 - 8,031,550
singlet/doubletdoublet
Overlap geneWdr70, LOC665556, LOC621001
Upstream geneLifr, Egflam, Gdnf
Downstream geneNup155, 2410089E03Rik, LOC100039599, Nipbl, EG666437, LOC100039560, LOC100039633, Slc1a3, EG622770, LOC268781, LOC382969, LOC100039619, Ranbp3l, 1110020G09Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215H16.bB6Ng01-215H16.g
ACCGA032437GA032438
length780702
definitionB6Ng01-215H16.b B6Ng01-215H16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,030,768 - 8,031,550)(7,840,034 - 7,840,732)
sequence
gaattcacaacaaaccctctgtctttatctcttggaatcttagcattgca
aatgtataccactatgccttgtcattagtatatcgtatctatatatttat
agttgttgtcttttgagatagggtctctctaggcagtcctggctgtcctg
aaactcattatgtatacagggttggcattgaattcacagagatctgattg
cttctgcctcctgagtgctgagattaaaggtatacatcaccccacctagc
tattaatatatcctgaaatagcaactaggttattactattattttgcctt
gtggtgtgttgagaatcagtatcatgtaccttgtaaatagtttctaaaaa
tgtggaatgttactgaaatgtaatttaggaaaagataatcacctagtatt
ttccatgtgtcttggctttaaagaagaggcgtatgggctaggtgtggccg
tgcacatccttagcaccaacgcttggaaggtggggcaggtgggtctttgt
gagttccaggagtaagaccctggctcaaaaacaaaaccaaagaaaaatgt
tatgtgaatctgccctggtggcccatgtaaatgtcgcttgtaagaagtgg
aggcagaggccgggcgtggtggcccacacctttaatcccagcactcagga
ggcagaggccggcggatttctgagtttcgaggccagcctggtctacagag
tgagttccaggacagccagggctacacagggaaaccctgtctcaaaaaac
aaacaaaacaaacaaaacagacaaacaaac
gaattcatcgttgactaacagcccacttcctgcacgcatgcacacggact
aaagggaaagagggacaactgacatctgaggtcctcgagagaagatcaaa
gcactgcagccctgtctgctgcaccgcagccctgtctcctgcactgcagc
cctgtctccgcaggctggccttctttagcccttgcctctaacatcccgct
cttccattaagaaggaagacctgcaaactctgaaatccctttggtagaaa
ctctactctcacctgactggtgatgcttaaatggctgcaaacccttttct
gatactccagaactatggagaaagctacaaagagcctgcaagttgctaat
tcacatccaacaatactccaaggtggtttgtaagctgtgtgccactgaag
tgggctgagtcattccagagtcagtgttggcatcctcctgccccgccccg
tggaggtgaaggtgggggtggggcgggctgaaagaacaggtctccacatt
tccttagctttcctcaaatctggggcgctgctctccaatgtcggctagca
agcaagtgttaaaaagcaaatctaaacaacagtgacagtagacacacttg
ccccattttgaaccactggagtcctttacacttgatggctcatttttcct
tcctaatgttctctcctctacatgcattttggttattatgagggagggag
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_8030768_8031550
seq2: B6Ng01-215H16.b_44_823 (reverse)

seq1  GTTTGTTTTGTCTGTTTTGTTTTGTTTTGTTTTGTTTTTTTGAGACAGGG  50
      ||||| ||||||||||||| ||||||||||||   |||||||||||||||
seq2  GTTTG-TTTGTCTGTTTTG-TTTGTTTTGTTT--GTTTTTTGAGACAGGG  46

seq1  TTTCCCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCT  96

seq1  GGCCTCG-AACTCAGAAATCCGCCTGCCTCTGCCTCCTGAGTGCTGGGAT  149
      ||||||| |||||||||||||||| |||||||||||||||||||||||||
seq2  GGCCTCGAAACTCAGAAATCCGCCGGCCTCTGCCTCCTGAGTGCTGGGAT  146

seq1  TAAAGGTGTGGGCCACCACGCCCGGCCTCTGCCTCCACTTCTTACAAGCG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTGTGGGCCACCACGCCCGGCCTCTGCCTCCACTTCTTACAAGCG  196

seq1  ACATTTACATGGGCCACCAGGGCAGATTCACATAACATTTTTCTTTGGTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTACATGGGCCACCAGGGCAGATTCACATAACATTTTTCTTTGGTT  246

seq1  TTGTTTTTGAGCCAGGGTCTTACTCCTGGAACTCACAAAGACCCACCTGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTGAGCCAGGGTCTTACTCCTGGAACTCACAAAGACCCACCTGC  296

seq1  CCCACCTTCCAAGCGTTGGTGCTAAGGATGTGCACGGCCACACCTAGCCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTTCCAAGCGTTGGTGCTAAGGATGTGCACGGCCACACCTAGCCC  346

seq1  ATACGCCTCTTCTTTAAAGCCAAGACACATGGAAAATACTAGGTGATTAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGCCTCTTCTTTAAAGCCAAGACACATGGAAAATACTAGGTGATTAT  396

seq1  CTTTTCCTAAATTACATTTCAGTAACATTCCACATTTTTAGAAACTATTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCTAAATTACATTTCAGTAACATTCCACATTTTTAGAAACTATTT  446

seq1  ACAAGGTACATGATACTGATTCTCAACACACCACAAGGCAAAATAATAGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGTACATGATACTGATTCTCAACACACCACAAGGCAAAATAATAGT  496

seq1  AATAACCTAGTTGCTATTTCAGGATATATTAATAGCTAGGTGGGGTGATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACCTAGTTGCTATTTCAGGATATATTAATAGCTAGGTGGGGTGATG  546

seq1  TATACCTTTAATCTCAGCACTCAGGAGGCAGAAGCAATCAGATCTCTGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCTTTAATCTCAGCACTCAGGAGGCAGAAGCAATCAGATCTCTGTG  596

seq1  AATTCAATGCCAACCCTGTATACATAATGAGTTTCAGGACAGCCAGGACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAATGCCAACCCTGTATACATAATGAGTTTCAGGACAGCCAGGACT  646

seq1  GCCTAGAGAGACCCTATCTCAAAAGACAACAACTATAAATATATAGATAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGAGAGACCCTATCTCAAAAGACAACAACTATAAATATATAGATAC  696

seq1  GATATACTAATGACAAGGCATAGTGGTATACATTTGCAATGCTAAGATTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACTAATGACAAGGCATAGTGGTATACATTTGCAATGCTAAGATTC  746

seq1  CAAGAGATAAAGACAGAGGGTTTGTTGTGAATTC  783
      ||||||||||||||||||||||||||||||||||
seq2  CAAGAGATAAAGACAGAGGGTTTGTTGTGAATTC  780

seq1: chr15_7840034_7840732
seq2: B6Ng01-215H16.g_68_769

seq1  GAATTCATCGTTGACTAACAGCCCACTTCCTGCACGCATGCACACGGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCGTTGACTAACAGCCCACTTCCTGCACGCATGCACACGGACT  50

seq1  AAAGGGAAAGAGGGACAACTGACATCTGAGGTCCTCGAGAGAAGATCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAAAGAGGGACAACTGACATCTGAGGTCCTCGAGAGAAGATCAAA  100

seq1  GCACTGCAGCCCTGTCTGCTGCACCGCAGCCCTGTCTCCTGCACTGCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGCAGCCCTGTCTGCTGCACCGCAGCCCTGTCTCCTGCACTGCAGC  150

seq1  CCTGTCTCCGCAGGCTGGCCTTCTTTAGCCCTTGCCTCTAACATCCCGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTCCGCAGGCTGGCCTTCTTTAGCCCTTGCCTCTAACATCCCGCT  200

seq1  CTTCCATTAAGAAGGAAGACCTGCAAACTCTGAAATCCCTTTGGTAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATTAAGAAGGAAGACCTGCAAACTCTGAAATCCCTTTGGTAGAAA  250

seq1  CTCTACTCTCACCTGACTGGTGATGCTTAAATGGCTGCAAACCCTTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACTCTCACCTGACTGGTGATGCTTAAATGGCTGCAAACCCTTTTCT  300

seq1  GATACTCCAGAACTATGGAGAAAGCTACAAAGAGCCTGCAAGTTGCTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTCCAGAACTATGGAGAAAGCTACAAAGAGCCTGCAAGTTGCTAAT  350

seq1  TCACATCCAACAATACTCCAAGGTGGTTTGTAAGCTGTGTGCCACTGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCCAACAATACTCCAAGGTGGTTTGTAAGCTGTGTGCCACTGAAG  400

seq1  TGGGCTGAGTCATTCCAGAGTCAGTGTTGGCATCCTCCTGCCCCGCCCCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTGAGTCATTCCAGAGTCAGTGTTGGCATCCTCCTGCCCCGCCCCG  450

seq1  TGGAGGTGAAGGTGGGGGTGGGGCGGGCTGAAAGAACAGGTCTCCACATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTGAAGGTGGGGGTGGGGCGGGCTGAAAGAACAGGTCTCCACATT  500

seq1  TCCTTAGCTTTCCTCAAATCTGGGGCGCTGCTCTCCAATGTCGGCTAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGCTTTCCTCAAATCTGGGGCGCTGCTCTCCAATGTCGGCTAGCA  550

seq1  AGCAAGTGTTAAAAAGCAAATC-AAACAACAGTGACAGTAGACACACTTG  599
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGCAAGTGTTAAAAAGCAAATCTAAACAACAGTGACAGTAGACACACTTG  600

seq1  CCCCA-TTTGAACCACTGGAGTCCTTTACACTTGATGGCTCAGTTTTCCT  648
      ||||| |||||||||||||||||||||||||||||||||||| |||||||
seq2  CCCCATTTTGAACCACTGGAGTCCTTTACACTTGATGGCTCATTTTTCCT  650

seq1  TCCTAATGTTCTCTCCTCTACATGCA-TTTGGTTAGTTATGA-GGAGGGA  696
      |||||||||||||||||||||||||| |||||||| |||||| |||||||
seq2  TCCTAATGTTCTCTCCTCTACATGCATTTTGGTTA-TTATGAGGGAGGGA  699

seq1  GGA  699
      |||
seq2  GGA  702