BAC Information

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BAC

Clone NameB6Ng01-216L10
Chromosome15 (Build37)
Map Location 72,748,641 - 72,877,414
singlet/doubletdoublet
Overlap gene1810044A24Rik
Upstream geneCol22a1, Kcnk9, LOC665621, Peg13, LOC100041120
Downstream geneChrac1, Eif2c2, Ptk2, LOC666053, LOC100040929, Dennd3, Slc45a4, Gpr20, LOC100040946, pPtp4a3, Gm628, LOC100041273, EG625276, LOC100040966
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216L10.bB6Ng01-216L10.g
ACCGA033329GA033330
length1,019770
definitionB6Ng01-216L10.b B6Ng01-216L10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,876,397 - 72,877,414)(72,748,641 - 72,749,251)
sequence
gaattcagctgaacactttcagacctcacagaccctggctgaatagtttc
aagtgcatttcctcggaaaagggggcatttctttcccttttaaaaaaatt
taagggctggtgagatggctcagtgggtaagagcacccaatagctcttcc
gaaggtctggagttcaaatcccagcaaccacatggtggctcacaaccatc
cataatgaaatctgactccctcttctggagtgtctgaagacagcgacagt
gtacttacatataataaataaataaaaataaaatcttaagaaaaaaaatt
tttaaagattaaaaaatttttgtagtttttttttttccccttcattcttt
cttttagtctttcaatcctagcttcatgctgctcacaagttggggcactg
atctttattctgaagatttggatgtggacctgtaggtctataactaaagg
acaaaatatagtttctttaaaaaattagggctggaaagccagatatgatg
ctgggctcccatactcagagcgaggcttaggaatggaaggccaggcttag
ctacatagtatatttgaggctagcctggactacatgagatcctgtcttga
aaaaacaaaacaaaacaaaacaaaacaaccaagatggagaaggtagccca
cttgtagagttcctgcctagcaccgtgggaggacctgggtcccttatata
ggacccccaccccaaaatgtatagaatattctatagtcaactggaagaaa
gtgcttaccattgacttgtaaaggtttcttagtagtggtggcctctactt
tttcttctctctgaacttggtaatattacttaccattaaattgatcaaaa
caggcctgaggtgtggcttgctggtagaacacctggttctcatctctgtc
actggcattcgatggtggggaactgacatgacgcatggtccagagccagg
ctgtggtggtgcacgcctgcaatcccgcactttggaggcagaggcaggtg
agttctttgaatttgaggc
gaattccagaacgacccttgctagacagacaatgaaagcagtaagttcta
ggctcaatgagaaacacgatcttaatatataataaagggcaatcaaggaa
ggcacctcaatcaaccttaggcctctacatggatacacatatgtgctcca
cacacaatcacacacacacacacacacacacacacacacacacacacaga
cagacagaatcatgggctagagaaagggctctgtcagtagagggcttact
gtaataatatctgactttaatccctaaaattcatgtaaaaagccaaatca
agtatctcagttagatttctgtcatgttggcatgagctaaagtcatctgg
gaagatgacacctcaattgaaaacatgcccccatcagactggcctctaga
caagcctgtggggcattttcttgactgatgggtaatggagaagggctcag
atcactcttgctgtactgaccttgggcaatggttctggagtattcaagaa
agcaagctggagccagttagaagcatccctccatggtctctgcttcagct
cccacctctgggttcctgtcctgagttcctaccatgacttccattgatgg
tggtctgtattctgtgaaacaaaccctttcctcccaaagatttttctggg
gctttttttgatggagatggtttttttgttttgtttgtctgttttttggg
ttggtttttgttttaatgtaaatggttatttttgccctggcttgtatgtc
tgttataacatatgcatcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_72876397_72877414
seq2: B6Ng01-216L10.b_46_1064 (reverse)

seq1  GCCTCAAATTCAGAG-ACCCACCTGCCTCTGCCTCCCAAGTGCTGGGATT  49
      |||||||||||| || || ||||||||||||||||| |||||| ||||||
seq2  GCCTCAAATTCAAAGAACTCACCTGCCTCTGCCTCCAAAGTGC-GGGATT  49

seq1  GCAGGCGTGCACCACCACAGCCTGGCTCTGGACCATGCGTCATGTCAG-T  98
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCAGGCGTGCACCACCACAGCCTGGCTCTGGACCATGCGTCATGTCAGTT  99

seq1  CCCCACCATCGAATGCCAGTGACAGAGATGAGAACCAGGTGTTCTACCAG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCATCGAATGCCAGTGACAGAGATGAGAACCAGGTGTTCTACCAG  149

seq1  CAAGCCACACCTCAGGCCTGTTTTGATCAATTTAATGGTAAGTAATATTA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCACACCTCAGGCCTGTTTTGATCAATTTAATGGTAAGTAATATTA  199

seq1  CCAAGTTCAGAGAGAAGAAAAAGTAGAGGCCACCACTACTAAGAAACCTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTTCAGAGAGAAGAAAAAGTAGAGGCCACCACTACTAAGAAACCTT  249

seq1  TACAAGTCAATGGTAAGCACTTTCTTCCAGTTGACTATAGAATATTCTAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGTCAATGGTAAGCACTTTCTTCCAGTTGACTATAGAATATTCTAT  299

seq1  ACATTTTGGGGTGGGGGTCCTATATAAGGGACCCAGGTCCTCCCACGGTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTGGGGTGGGGGTCCTATATAAGGGACCCAGGTCCTCCCACGGTG  349

seq1  CTAGGCAGGAACTCTACAAGTGGGCTACCTTCTCCATCTTGGTTGTTTTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCAGGAACTCTACAAGTGGGCTACCTTCTCCATCTTGGTTGTTTTG  399

seq1  TTTTGTTTTGTTTTGTTTTTTCAAGACAGGATCTCATGTAGTCCAGGCTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTGTTTTGTTTTTTCAAGACAGGATCTCATGTAGTCCAGGCTA  449

seq1  GCCTCAAATATACTATGTAGCTAAGCCTGGCCTTCCATTCCTAAGCCTCG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAAATATACTATGTAGCTAAGCCTGGCCTTCCATTCCTAAGCCTCG  499

seq1  CTCTGAGTATGGGAGCCCAGCATCATATCTGGCTTTCCAGCCCTAATTTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGTATGGGAGCCCAGCATCATATCTGGCTTTCCAGCCCTAATTTT  549

seq1  TTAAAGAAACTATATTTTGTCCTTTAGTTATAGACCTACAGGTCCACATC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAAACTATATTTTGTCCTTTAGTTATAGACCTACAGGTCCACATC  599

seq1  CAAATCTTCAGAATAAAGATCAGTGCCCCAACTTGTGAGCAGCATGAAGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCTTCAGAATAAAGATCAGTGCCCCAACTTGTGAGCAGCATGAAGC  649

seq1  TAGGATTGAAAGACTAAAAGAAAGAATGAAGGGGAAAAAAAAAAACTACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATTGAAAGACTAAAAGAAAGAATGAAGGGGAAAAAAAAAAACTACA  699

seq1  AAAATTTTTTAATCTTTAAAAATTTTTTTTCTTAAGATTTTATTTTTATT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTTTAATCTTTAAAAATTTTTTTTCTTAAGATTTTATTTTTATT  749

seq1  TATTTATTATATGTAAGTACACTGTCGCTGTCTTCAGACACTCCAGAAGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTATATGTAAGTACACTGTCGCTGTCTTCAGACACTCCAGAAGA  799

seq1  GGGAGTCAGATTTCATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTCAGATTTCATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGG  849

seq1  GATTTGAACTCCAGACCTTCGGAAGAGCTATTGGGTGCTCTTACCCACTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGAACTCCAGACCTTCGGAAGAGCTATTGGGTGCTCTTACCCACTG  899

seq1  AGCCATCTCACCAGCCCTTAAATTTTTTTAAAAGGGAAAGAAATGCCCCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCTCACCAGCCCTTAAATTTTTTTAAAAGGGAAAGAAATGCCCCC  949

seq1  TTTTCCGAGGAAATGCACTTGAAACTATTCAGCCAGGGTCTGTGAGGTCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCGAGGAAATGCACTTGAAACTATTCAGCCAGGGTCTGTGAGGTCT  999

seq1  GAAAGTGTTCAGCTGAATTC  1018
      ||||||||||||||||||||
seq2  GAAAGTGTTCAGCTGAATTC  1019

seq1: chr15_72748641_72749251
seq2: B6Ng01-216L10.g_221_839

seq1  ACACAATCACACACACACACACACACACACACACACACACACACACAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATCACACACACACACACACACACACACACACACACACACACAGAC  50

seq1  AGACAGAATCATGGGCTAGAGAAAGGGCTCTGTCAGTAGAGGGCTTACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAATCATGGGCTAGAGAAAGGGCTCTGTCAGTAGAGGGCTTACTG  100

seq1  TAATAATATCTGACTTTAATCCCTAAAATTCATGTAAAAAGCCAAATCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATATCTGACTTTAATCCCTAAAATTCATGTAAAAAGCCAAATCAA  150

seq1  GTATCTCAGTTAGATTTCTGTCATGTTGGCATGAGCTAAAGTCATCTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTCAGTTAGATTTCTGTCATGTTGGCATGAGCTAAAGTCATCTGGG  200

seq1  AAGATGACACCTCAATTGAAAACATGCCCCCATCAGACTGGCCTCTAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGACACCTCAATTGAAAACATGCCCCCATCAGACTGGCCTCTAGAC  250

seq1  AAGCCTGTGGGGCATTTTCTTGACTGATGGGTAATGGAGAAGGGCTCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTGTGGGGCATTTTCTTGACTGATGGGTAATGGAGAAGGGCTCAGA  300

seq1  TCACTCTTGCTGTACTGACCTTGGGCAATGGTTCTGGAGTATTCAAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTTGCTGTACTGACCTTGGGCAATGGTTCTGGAGTATTCAAGAAA  350

seq1  GCAAGCTGGAGCCAGTTAGAAGCATCCCTCCATGGTCTCTGCTTCAGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCTGGAGCCAGTTAGAAGCATCCCTCCATGGTCTCTGCTTCAGCTC  400

seq1  CCACCTCTGGGTTCCTGTCCTGAGTTCCTACCATGACTTCCATTGATGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTCTGGGTTCCTGTCCTGAGTTCCTACCATGACTTCCATTGATGGT  450

seq1  GGTCTGTATTCTGTGAAACAAACCCTTTCCTCCCAAAGATTTTTCTGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTATTCTGTGAAACAAACCCTTTCCTCCCAAAGATTTTTCTGGGG  500

seq1  CTTTTTTTGATGGAGATGG--TTTTTGTTTTGTTTGTCTG-TTTTTGGGT  547
      |||||||||||||||||||  ||||||||||||||||||| |||||||||
seq2  CTTTTTTTGATGGAGATGGTTTTTTTGTTTTGTTTGTCTGTTTTTTGGGT  550

seq1  TGG-TTTTGTTTTAATGTAAATGGTTA-TTTTGCC--TGCTTGTATGTCT  593
      ||| ||||||||||||||||||||||| |||||||   ||||||||||||
seq2  TGGTTTTTGTTTTAATGTAAATGGTTATTTTTGCCCTGGCTTGTATGTCT  600

seq1  G-TATAACACATGCATCCT  611
      | ||||||| |||||||||
seq2  GTTATAACATATGCATCCT  619