BAC Information

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BAC

Clone NameB6Ng01-218H19
Chromosome15 (Build37)
Map Location 19,907,821 - 20,040,055
singlet/doubletdoublet
Overlap genenone
Upstream geneCdh10, EG666857, EG666875, LOC621884, LOC100040265
Downstream geneAcot10, LOC100040302
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218H19.bB6Ng01-218H19.g
ACCGA034602GA034603
length1,0261,132
definitionB6Ng01-218H19.b B6Ng01-218H19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,907,821 - 19,908,581)(20,038,926 - 20,040,055)
sequence
gaattccctctttatagtatcagcactactatgcattcattttatttaca
gactttattactttcttgtcttactgtagataagcttgcacgtattaagc
aagtatttatcaatggagtttcacgaacatattttattttctccaacaat
tgttcttacgacatacagtggcatttcacttagttggatttgctataatg
gagaagtaaatatttcttaatactagaaaacaattttgtttttaactaaa
atgtttattttccatttgtttgtttgtttgtttgtttgtttattcacttt
acaaccagagcgctgctgccctccccccaataccctctcacacagtccct
cctgatatgcctccccttcacctctgggaggatgaaggatcccctgaata
tcttcatactcggccatgtcaagtctctacagggttaggtacatcttctc
tctctgtagatagacaaggcagtccattttgtggaataggatacacagat
aagcaagagcttcagggacaggccctgctgcagttgttgggggacccaca
tgaagactgactcgcatatctgctacataagtacagggacataggttcac
cctgtgtatgatctttggttggtagctcaatctcttgagagatcccctaa
gtgccctgttagttgattctgttggtcttcctgtgaagttcttaaccctt
tagggccattgatctttcccccaaatcttccataagattccctgatatca
ccttcctgtatgagccagtgccctgagcaaaccatgggcactagctcagc
agtgagtcccacaacaccctgaggaagctctacaaacaggtactctaagt
tgctcaagatcataggtgaagacacagcagatgacccaacactgggagta
actagaatcagtgggatccaaggacacagaaaccgccactaggccagcgg
cactggttctttctggtctgagccgatgccctgagcagaccttgggggct
agcactatacccactcccacaatacc
gaattccaaaacactagcaatatgctagttgaaattttatcagcacatat
atatatatatatatatatatatatatatatatatatatcagaaatatata
tatatcagaaaatttcccattatgatctcatggtataagtcttcacaggc
tacaaataaccaggtaaaatgaagtttagaaattctttctaaaagtgcaa
agtattatttaacaaaaacatatcacatgctaagaatgtaagacattttc
taagatcagggcatcttgttgccatgttcttatggtaacacagagcaggc
agatgaaggacaagttcaagacaatcttcaagaagtgaggttgactccaa
cctgggtggcacaggactccattcactcccccaaaggaagaaaagaaaca
catgaaatatattttatatcatagtgataaaactactgtgaaatttggat
atgtaagacagatgagactgctcagtgggaacaggggccagatgaattgc
actcaatctctgggaagcatgcaaacatggaaagagaaaactgaaaacat
gaagagctcttctgacctccacattcattttgtgacacacacatgatcat
tctcatatacatgccatacacacatacacttacacatatacattaaaaga
aacaattttaatcattaatattttcaataccactggagtcattatcagta
aaaaatgctattgacatttaaaaaaataatcagtattattcacatgtcaa
aatattttaatggcaccatttccatgcttctattacaaataaggaatctg
attttataattagtagatatattgaataaattaacaatataattatttta
aattactataatatataaatgcaatattaatagtgtgcttgaattttttt
ttaattttattttaaattctttacataattttcataggtgttttgcctgc
atgtatatctgttttagggtgtcagaagcactgggacaaaaggttacagg
cagatgtaagctgccttgtggtactgggaatttatcctgggtttcctgga
agaagcagctgtgctctaaactgcctgagctactctcttagctcagagag
attgaaattagtagggcctgtgtcaatacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_19907821_19908581
seq2: B6Ng01-218H19.b_45_805

seq1  GAATTCCCTCTTTATAGTATCAGCACTACTATGCATTCATTTTATTTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTCTTTATAGTATCAGCACTACTATGCATTCATTTTATTTACA  50

seq1  GACTTTATTACTTTCTTGTCTTACTGTAGATAAGCTTGCACGTATTAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTATTACTTTCTTGTCTTACTGTAGATAAGCTTGCACGTATTAAGC  100

seq1  AAGTATTTATCAATGGAGTTTCACGAACATATTTTATTTTCTCCAACAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTTATCAATGGAGTTTCACGAACATATTTTATTTTCTCCAACAAT  150

seq1  TGTTCTTACGACATACAGTGGCATTTCACTTAGTTGGATTTGCTATAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTACGACATACAGTGGCATTTCACTTAGTTGGATTTGCTATAATG  200

seq1  GAGAAGTAAATATTTCTTAATACTAGAAAACAATTTTGTTTTTAACTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTAAATATTTCTTAATACTAGAAAACAATTTTGTTTTTAACTAAA  250

seq1  ATGTTTATTTTCCATTTGTTTGTTTGTTTGTTTGTTTGTTTATTCACTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTATTTTCCATTTGTTTGTTTGTTTGTTTGTTTGTTTATTCACTTT  300

seq1  ACAACCAGAGCGCTGCTGCCCTCCCCCCAATACCCTCTCACACAGTCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCAGAGCGCTGCTGCCCTCCCCCCAATACCCTCTCACACAGTCCCT  350

seq1  CCTGATATGCCTCCCCTTCACCTCTGGGAGGATGAAGGATCCCCTGAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATATGCCTCCCCTTCACCTCTGGGAGGATGAAGGATCCCCTGAATA  400

seq1  TCTTCATACTCGGCCATGTCAAGTCTCTACAGGGTTAGGTACATCTTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATACTCGGCCATGTCAAGTCTCTACAGGGTTAGGTACATCTTCTC  450

seq1  TCTCTGTAGATAGACAAGGCAGTCCATTTTGTGGAATAGGATACACAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTAGATAGACAAGGCAGTCCATTTTGTGGAATAGGATACACAGAT  500

seq1  AAGCAAGAGCTTCAGGGACAGGCCCTGCTGCAGTTGTTGGGGGACCCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGAGCTTCAGGGACAGGCCCTGCTGCAGTTGTTGGGGGACCCACA  550

seq1  TGAAGACTGACTCGCATATCTGCTACATAAGTACAGGGACATAGGTTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACTGACTCGCATATCTGCTACATAAGTACAGGGACATAGGTTCAC  600

seq1  CCTGTGTATGATCTTTGGTTGGTAGCTCAATCTCTTGAGAGATCCCCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTATGATCTTTGGTTGGTAGCTCAATCTCTTGAGAGATCCCCTAA  650

seq1  GTGCCCTGTTAGTTGATTCTGTTGGTCTTCCTGTGAAGTTCTTAACCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCTGTTAGTTGATTCTGTTGGTCTTCCTGTGAAGTTCTTAACCCTT  700

seq1  TAGGGCCATTGATCTTTCCCCCAAATCTTCCATAAGATTCCCTGATATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCCATTGATCTTTCCCCCAAATCTTCCATAAGATTCCCTGATATCA  750

seq1  CCTTCCTGTAT  761
      |||||||||||
seq2  CCTTCCTGTAT  761

seq1: chr15_20038926_20040055
seq2: B6Ng01-218H19.g_62_1193 (reverse)

seq1  AAAGTAATGACACAGCACCTACTAAAATTTCAA--TCTCTGAGCT-AGAG  47
      |||||| ||||||||  ||||||  ||||||||  |||||||||| ||||
seq2  AAAGTATTGACACAGGCCCTACT--AATTTCAATCTCTCTGAGCTAAGAG  48

seq1  AGTAGGCTCA-GCAGTTTAGAGCACAGGCTGC-TCTTCCAGGGAACCCAG  95
      |||| ||||| ||||||||||||||| ||||| ||||||||| |||||||
seq2  AGTA-GCTCAGGCAGTTTAGAGCACA-GCTGCTTCTTCCAGGAAACCCAG  96

seq1  GATAAATTCCCAGTACCCACAAGGCAGCTTACATCTGCCTGTAA-CTTTT  144
      ||||||||||||||| |||||||||||||||||||||||||||| |||||
seq2  GATAAATTCCCAGTA-CCACAAGGCAGCTTACATCTGCCTGTAACCTTTT  145

seq1  GTCCCAGTGCTTCTGACACCCTAAAACAGATATACATGCAGGCAAAACAC  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGTGCTTCTGACACCCTAAAACAGATATACATGCAGGCAAAACAC  195

seq1  CTATGAAAATTATGTAAAGAATTTAAAATAAAATT-AAAAAAAATTCAAG  243
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CTATGAAAATTATGTAAAGAATTTAAAATAAAATTAAAAAAAAATTCAAG  245

seq1  CACACTATTAATATTGCATTTATATATTATAGTAATTTAAAATAATTATA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTATTAATATTGCATTTATATATTATAGTAATTTAAAATAATTATA  295

seq1  TTGTTAATTTATTCAATATATCTACTAATTATAAAATCAGATTCCTTATT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAATTTATTCAATATATCTACTAATTATAAAATCAGATTCCTTATT  345

seq1  TGTAATAGAAGCATGGAAATGGTGCCATTAAAATATTTTGACATGTGAAT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATAGAAGCATGGAAATGGTGCCATTAAAATATTTTGACATGTGAAT  395

seq1  AATACTGATTATTTTTTTAAATGTCAATAGCATTTTTTACTGATAATGAC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTGATTATTTTTTTAAATGTCAATAGCATTTTTTACTGATAATGAC  445

seq1  TCCAGTGGTATTGAAAATATTAATGATTAAAATTGTTTCTTTTAATGTAT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGGTATTGAAAATATTAATGATTAAAATTGTTTCTTTTAATGTAT  495

seq1  ATGTGTAAGTGTATGTGTGTATGGCATGTATATGAGAATGATCATGTGTG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTAAGTGTATGTGTGTATGGCATGTATATGAGAATGATCATGTGTG  545

seq1  TGTCACAAAATGAATGTGGAGGTCAGAAGAGCTCTTCATGTTTTCAGTTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACAAAATGAATGTGGAGGTCAGAAGAGCTCTTCATGTTTTCAGTTT  595

seq1  TCTCTTTCCATGTTTGCATGCTTCCCAGAGATTGAGTGCAATTCATCTGG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCCATGTTTGCATGCTTCCCAGAGATTGAGTGCAATTCATCTGG  645

seq1  CCCCTGTTCCCACTGAGCAGTCTCATCTGTCTTACATATCCAAATTTCAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGTTCCCACTGAGCAGTCTCATCTGTCTTACATATCCAAATTTCAC  695

seq1  AGTAGTTTTATCACTATGATATAAAATATATTTCATGTGTTTCTTTTCTT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTTTATCACTATGATATAAAATATATTTCATGTGTTTCTTTTCTT  745

seq1  CCTTTGGGGGAGTGAATGGAGTCCTGTGCCACCCAGGTTGGAGTCAACCT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGGGGGAGTGAATGGAGTCCTGTGCCACCCAGGTTGGAGTCAACCT  795

seq1  CACTTCTTGAAGATTGTCTTGAACTTGTCCTTCATCTGCCTGCTCTGTGT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTTGAAGATTGTCTTGAACTTGTCCTTCATCTGCCTGCTCTGTGT  845

seq1  TACCATAAGAACATGGCAACAAGATGCCCTGATCTTAGAAAATGTCTTAC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATAAGAACATGGCAACAAGATGCCCTGATCTTAGAAAATGTCTTAC  895

seq1  ATTCTTAGCATGTGATATGTTTTTGTTAAATAATACTTTGCACTTTTAGA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTAGCATGTGATATGTTTTTGTTAAATAATACTTTGCACTTTTAGA  945

seq1  AAGAATTTCTAAACTTCATTTTACCTGGTTATTTGTAGCCTGTGAAGACT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTCTAAACTTCATTTTACCTGGTTATTTGTAGCCTGTGAAGACT  995

seq1  TATACCATGAGATCATAATGGGAAATTTTCTGATATATATATATTTCTGA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCATGAGATCATAATGGGAAATTTTCTGATATATATATATTTCTGA  1045

seq1  TATATATATATATATATATATATATATATATATATATATATGTGCTGATA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATATATATATATATATATATGTGCTGATA  1095

seq1  AAATTTCAACTAGCATATTGCTAGTGTTTTGGAATTC  1130
      |||||||||||||||||||||||||||||||||||||
seq2  AAATTTCAACTAGCATATTGCTAGTGTTTTGGAATTC  1132