BAC Information

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BAC

Clone NameB6Ng01-218K14
Chromosome15 (Build37)
Map Location 49,640,955 - 49,767,594
singlet/doubletdoublet
Overlap geneLOC665160
Upstream geneEG665146, LOC100039600, LOC100039539
Downstream geneTrps1, LOC100039644
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218K14.bB6Ng01-218K14.g
ACCGA034729GA034730
length2611,112
definitionB6Ng01-218K14.b B6Ng01-218K14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(49,640,955 - 49,641,221)(49,766,470 - 49,767,594)
sequence
tttatttgggaagaaaaagaattgggagacatgatgtggtggtttgaacg
agactgcccctacaggctcatatatttgaaaaattgtttctcagttggta
gaactatttaagaaggattgtggtgtggactttttggggaatgtgtgtta
gtgggtgtgagccttgaggtttcaaaaggccatgttattctcattctctc
tctctctctctctctctctctctctctctctctctctctctctctctctc
tctctctctct
gaattcttggtcttgttgaatatctttgttttttttttttttcattttta
gcaatcaaaaatgctagacggggatgaattctttattacagcctgggttg
cactaataagatgctttttgaagaaagaaatggaaaaatagaacaggaca
taaaagatgacaaaaggagaaaagaaatgatagagaagaaaaatgaggca
aacagaaaggcaggaatggagaaagacagtcttcctccactatcatatgg
tataccacctctaatacgaacaacagcatagttatctattcaggcctgta
cttcctatctatcaccaatatgttttttgttttttacagttctgagattt
ctgtgtctttgtttatgcttagaggccctacttctcgaagtttgtttgat
ttcatggtgactatctctcaggaaatcagaacactaagctgacgtctttc
aagctttagttaagtatagtgtctgtcagtttcagaagagccatggggtg
tagactgtacatgctgtcagatttatgattgtctagaaggtgatctaaga
gaatcagacagatggatggatgtgaaaaacactgcattaggtattagtta
gtagttgcacagaaccaagcagcttaggattgataggaaataccttgtct
cgttcttaccagatttgccaatcactttctacttgcctaaacatgcagat
attgcttaatggctttcagttgtttgtaatataacattttgacaaacaca
atttcactaagtgatatcttattatgagaaattgtagtttttaaaagtct
tctcctctatgagctccttttgaatttagttacttttagaaattttattt
gttaaagcgtgatagtccatcccagtgtcctgtcctttctctattcctgt
cctattattgtgtctcctctaccaacaattggctgtagcctaaattgggt
aagaactgtaaccacagtaaatcttttcttcctcaaaactttatttttta
gaattataatatatttactacatctgacttccttccctcctaacatgtct
ctatatacctctccctgcttcatcatatctgactcttgatgtatctatgc
atgaatatatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_49640955_49641221
seq2: B6Ng01-218K14.b_42_308

seq1  GAATTCTTTATTTGGGAAGAAAAAGAATTGGGAGACATGATGTGGTGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATTTGGGAAGAAAAAGAATTGGGAGACATGATGTGGTGGTT  50

seq1  TGAACGAGACTGCCCCTACAGGCTCATATATTTGAAAAATTGTTTCTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACGAGACTGCCCCTACAGGCTCATATATTTGAAAAATTGTTTCTCAG  100

seq1  TTGGTAGAACTATTTAAGAAGGATTGTGGTGTGGACTTTTTGGGGAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAGAACTATTTAAGAAGGATTGTGGTGTGGACTTTTTGGGGAATGT  150

seq1  GTGTTAGTGGGTGTGAGCCTTGAGGTTTCAAAAGGCCATGTTATTCTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAGTGGGTGTGAGCCTTGAGGTTTCAAAAGGCCATGTTATTCTCAT  200

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  250

seq1  TCTCTCTTTCTCTCTCT  267
      ||||||| |||||||||
seq2  TCTCTCTCTCTCTCTCT  267

seq1: chr15_49766470_49767594
seq2: B6Ng01-218K14.g_63_1174 (reverse)

seq1  CCATATATTCATGCAATAAGAATTAACAATCAAAGAGTCCAAGATATGGA  50
      |||||||||||||||   |||  ||   ||| |||||||  |||||| ||
seq2  CCATATATTCATGCA--TAGA--TA--CATC-AAGAGTC--AGATAT-GA  40

seq1  TGGAAGCAGGGAGA-GTATATAGGAGGACATGTAGGGAGGGAAGGGAAGT  99
      | |||||||||||| ||||||||   |||||||  |||||||| ||||||
seq2  T-GAAGCAGGGAGAGGTATATAG--AGACATGTTAGGAGGGAA-GGAAGT  86

seq1  CAGAATGTAGTAATTATATTATAATTCT-AAAAATAAAGTTTTTGAGGAA  148
      ||| ||||||||| |||||||||||||| |||||||||| ||||||||||
seq2  CAG-ATGTAGTAAATATATTATAATTCTAAAAAATAAAG-TTTTGAGGAA  134

seq1  GAAAAGATTTACTTGTGTTACAGTTCTTACCCAA-TTAGGCTACAGCCAA  197
      |||||||||||||   |||||||||||||||||| |||||||||||||||
seq2  GAAAAGATTTACTGTGGTTACAGTTCTTACCCAATTTAGGCTACAGCCAA  184

seq1  TTG-TGGTAGAGGAGACACAATAATAGGAACAGGAATAGAGAAAGGACAG  246
      ||| |||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTGTTGGTAGAGGAGACACAATAATAGG-ACAGGAATAGAGAAAGGACAG  233

seq1  GACACTGGGATGGACTATCACGCTTTAACAAATAAAATTTCTAAAAGTAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGGGATGGACTATCACGCTTTAACAAATAAAATTTCTAAAAGTAA  283

seq1  CTAAATTCAAAAGGAGCTCATAGAGGAGAAGACTTTTAAAAACTACAATT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATTCAAAAGGAGCTCATAGAGGAGAAGACTTTTAAAAACTACAATT  333

seq1  TCTCATAATAAGATATCACTTAGTGAAATTGTGTTTGTCAAAATGTTATA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATAATAAGATATCACTTAGTGAAATTGTGTTTGTCAAAATGTTATA  383

seq1  TTACAAACAACTGAAAGCCATTAAGCAATATCTGCATGTTTAGGCAAGTA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAACAACTGAAAGCCATTAAGCAATATCTGCATGTTTAGGCAAGTA  433

seq1  GAAAGTGATTGGCAAATCTGGTAAGAACGAGACAAGGTATTTCCTATCAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGATTGGCAAATCTGGTAAGAACGAGACAAGGTATTTCCTATCAA  483

seq1  TCCTAAGCTGCTTGGTTCTGTGCAACTACTAACTAATACCTAATGCAGTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGCTGCTTGGTTCTGTGCAACTACTAACTAATACCTAATGCAGTG  533

seq1  TTTTTCACATCCATCCATCTGTCTGATTCTCTTAGATCACCTTCTAGACA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCACATCCATCCATCTGTCTGATTCTCTTAGATCACCTTCTAGACA  583

seq1  ATCATAAATCTGACAGCATGTACAGTCTACACCCCATGGCTCTTCTGAAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAAATCTGACAGCATGTACAGTCTACACCCCATGGCTCTTCTGAAA  633

seq1  CTGACAGACACTATACTTAACTAAAGCTTGAAAGACGTCAGCTTAGTGTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGACACTATACTTAACTAAAGCTTGAAAGACGTCAGCTTAGTGTT  683

seq1  CTGATTTCCTGAGAGATAGTCACCATGAAATCAAACAAACTTCGAGAAGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTCCTGAGAGATAGTCACCATGAAATCAAACAAACTTCGAGAAGT  733

seq1  AGGGCCTCTAAGCATAAACAAAGACACAGAAATCTCAGAACTGTAAAAAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCTCTAAGCATAAACAAAGACACAGAAATCTCAGAACTGTAAAAAA  783

seq1  CAAAAAACATATTGGTGATAGATAGGAAGTACAGGCCTGAATAGATAACT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAACATATTGGTGATAGATAGGAAGTACAGGCCTGAATAGATAACT  833

seq1  ATGCTGTTGTTCGTATTAGAGGTGGTATACCATATGATAGTGGAGGAAGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTTGTTCGTATTAGAGGTGGTATACCATATGATAGTGGAGGAAGA  883

seq1  CTGTCTTTCTCCATTCCTGCCTTTCTGTTTGCCTCATTTTTCTTCTCTAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTTCTCCATTCCTGCCTTTCTGTTTGCCTCATTTTTCTTCTCTAT  933

seq1  CATTTCTTTTCTCCTTTTGTCATCTTTTATGTCCTGTTCTATTTTTCCAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTTTTCTCCTTTTGTCATCTTTTATGTCCTGTTCTATTTTTCCAT  983

seq1  TTCTTTCTTCAAAAAGCATCTTATTAGTGCAACCCAGGCTGTAATAAAGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTCAAAAAGCATCTTATTAGTGCAACCCAGGCTGTAATAAAGA  1033

seq1  ATTCATCCCCGTCTAGCATTTTTGATTGCTAAAAATGAAAAAAAAAAAAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCCCCGTCTAGCATTTTTGATTGCTAAAAATGAAAAAAAAAAAAA  1083

seq1  ACAAAGATATTCAACAAGACCAAGAATTC  1125
      |||||||||||||||||||||||||||||
seq2  ACAAAGATATTCAACAAGACCAAGAATTC  1112