BAC Information

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BAC

Clone NameB6Ng01-219D05
Chromosome15 (Build37)
Map Location 30,875,353 - 30,875,606
singlet/doubletsinglet
Overlap geneCtnnd2
Upstream geneLOC382975
Downstream gene9630009A06Rik, Dap, EG625796, 5730557B15Rik, Ropn1l, LOC622810, March6, Cmbl, Cct5, A930016P21Rik, LOC667231
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219D05.bB6Ng01-219D05.g
ACCGA035112GA035113
length1,0121,115
definitionB6Ng01-219D05.b B6Ng01-219D05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaacagaggaatctcaaatgtctgaggattacttcaaggaata
ttcattatccttagctaccagaaaaaaataaattaaaactacattaagtt
tctatcttatacctgtcagaatggctgagtgagcttaaaaacacaattta
aagcagtaatatctgaacctgctctatatttcctggctggggcagcacag
ttcttcaccaccaagaacaatgctctggagttcccaaatgaaacacacac
acacacacacacacacacacacacacacacacacaccacacacatagaca
cagacacacacacacacaaacacacaccacacacatagacacaggcacac
acacagacacacacacacacacacaccacacaatagacacagacacacac
accacacacatagacacagacacacacacagacacacacacacacacaca
cacacacacacaattctgttttagtactccttgaacagcacaaaggctga
gcacttccaaatgtccctgcagctaactcactcttccctctggtattcct
gaattattacttaactaaaatctttattttaacttgattgcttggaccca
gttgggcagccctctcagcccacagtctctcagatccttcacatggctgt
aggctcttgcttctccatctctcaagaccaatttttctgattccccatca
tggtgattctaatcttccttgtggtccattgtccaggaaatctaaagtct
tgctgctgtctccctgctcagccattggctgttgacaactttatttacca
attataactagctgggatcaggggtcttgtgtatctcacatgcaggcatg
tgaattctcatgtgattttgggagtctaatttaatacaaatagcattaga
accaatccacaagaagagtttacactagcaaggatgaagaagtggaatac
tttctcctatgttgttaggaatggagggtcttaagcccacacccacaggt
aacacacctatt
gaattctgttttctatcctgggttttttttttcccatatgaaattgagaa
ttgctctttccatgactatgaagaattctgttggaattttggaatattga
tggagataccatgaattttatagattgcttttggtagggtggcaattttt
actgttaatcctaccaatctatggtcatgggagatttttacatattctga
attattctttagtttctttcttgaaagaaattaagttcttgtcatacaaa
tctttgacatgtttggttagagttacccaagatatttgataatatttgtt
tctattgtgaatgattttgtttcccaaatttctttttctcccatttatca
tttgtataaaggaagtctacctattggtttgagttaattttatatccagt
tatttgctttttaactgtaaaagatctctggttgaatttttgtggttgct
tatctaaaccatctcctcatctgcaaatagtgataacttatttgacttat
tctttgccacattgtatcccctttgatctccttttgtggtcttattgttc
tacctagaactttgagtatacattgaacagaaaaaggggagagtaggcat
ccttgtcctctccctgatttaagtgggattgcttcaagtatctttcctac
taagttaatattggcttttggtttgctgtgtattgcttttattatattta
ggcatgggccttgaattcctgatctctccaatacttttcaaatggaaaag
gtattatattttgtcagatgcttttctacatctaataagataatgatatg
agtgtttatataggggatactttaatggattttcacatattgaaccaacc
atgcaaccctgggaagagcatatttgatcatgctgaatgatagttttgat
gtgttcttcgattcaatttgcatgaattttattgagtattttgcatcaat
gttcatgacaaaatttgtgtgagaaaaaatgtttgtgttctttgtggttt
aggtatgagagcatatggctgcatagaaagaaaattatggctgccataga
tatactcttcaattttctaattttatgattagtttggagggatgtgggta
atcaggtctctctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_30875353_30875606
seq2: B6Ng01-219D05.b_284_495 (reverse)

seq1  TGTGTGTGCCTGTGCAAGTGGGTGTGTGTGTGTGCCTCTGTGTGTGTGTG  50
                       ||| |||||||||||||  ||||||||||||| 
seq2  ----------------TGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTC  34

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGCCTGTG-CAACTGCATGTATGTAT  99
      ||||| | |||||||| ||||||||| ||||| | | ||  ||  ||| |
seq2  TGTGTCTATGTGTGTG-GTGTGTGTGTCTGTGTCTATTGTGTG-GTGTGT  82

seq1  GTGTGTGCCTGTGCAAGTGAGTGTGTGTGTGCCTATGCACATGGT-TGTG  148
      |||||||  ||||   ||| |||||  |||| |||||    |||| ||||
seq2  GTGTGTGTGTGTGTCTGTGTGTGTGCCTGTGTCTATGTGTGTGGTGTGTG  132

seq1  TTTGTGTGTGTATGTGTCCCTATGCAATTATGTGTGTGTGTGTGTGCCTA  198
      ||||||||||| ||||||            ||||| | ||||||||    
seq2  TTTGTGTGTGTGTGTGTC------------TGTGTCTATGTGTGTG----  166

seq1  TGCAAGTGTGTGTGTTTGTGTGTGTGTATTGTGCTTGTGCGTGTGTGTGT  248
           |||||||||| ||||||||||   ||||  |||| ||||||||||
seq2  -----GTGTGTGTGTGTGTGTGTGTG---TGTG--TGTGTGTGTGTGTGT  206

seq1  GTGTTT  254
      ||||||
seq2  GTGTTT  212