BAC Information

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BAC

Clone NameB6Ng01-219H20
Chromosome15 (Build37)
Map Location 43,283,619 - 43,284,733
singlet/doubletsinglet
Overlap genenone
Upstream geneAngpt1, Rspo2, LOC675960, Eif3s6
Downstream geneTtc35, LOC100039288, Tmem74, LOC100039309, Trhr, LOC665041, Nudcd1, Eny2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219H20.bB6Ng01-219H20.g
ACCGA035312GA035313
length1,0961,121
definitionB6Ng01-219H20.b B6Ng01-219H20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggattttg
tcaaatgctttctctgcatctaacgagataatcatgtggtttttgtcttt
gagtttgtttatatactggattacgttgatggatttccgtatattgaacc
atccctgcatccctgggaggaaacctacttggtcaggatggatgattgtt
ttgatgtgttcctggattcggttagcaagaactttattgaggatttttgc
atcgatattcataagggaaattggtctgaagttctctatctttgttgggt
ctttttgtggtttaggtatcagagtaattgtggcttcatagaatgagttg
ggtagagtaccttctgtttctattttgtggaatagtttgtgaagaactgg
gattagatcttctttaaaggtcttatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaatgactgcttctatttct
ttaggggatataggactatttagatcattaacctgatcttgatttagctt
tggtacctggtatctgtctagaaacttgtccatttcatccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtttcccttttcatttcctattttgttaat
taggatgctttccctgtgccctctagtgagtcggctaagggtttatctat
cttgttgattttctcaaagaaccagctccttgattggttgattctttgaa
tagttcttcttgtttccacttggttgattgcacccctgagtttgattatt
tcctgccttctgctcctcttggggtgaatttgcttccttttgttctagag
ctttttagggtgtgttgtcaagctgctaatgtgtgctctctctagtttcc
ttttttgggaggcactcagagctatgagttttcctcttaggaatggcttt
cattgtgtcccataagtttgggtatgtgtgctcatttcattacttcaaaa
agtccttattttctttcattttccatctcttgacagaaggtgttca
gaattccttgaaagagagaaagaagaaaagatcttagtaatagaaactat
cacacaagggtcctcacataggagaacaagcatccaaaacatactgtctt
gctttcttatgtgtgaattatttgtatttaatttttattagtatactggt
gaggcctgagtgcttggtgtgtggttgtaaatttgaatagtgaaagcaca
gaatggctaaaaatgagtatgtttccacgatttgttttgtgacaaatatc
ccaaattaagcaaatttctttcctatcatcaacatataatagtccagaat
ttttcactgtcctcctttacttcagggtttcttcattctgaatgataagc
ataaaaacacttgcaaaaagaaacccttatctgttctattatatgggaaa
gaaaatagatctaccctctgatctaagtagacaatgcatgagtatttacc
caaaggagtccaagtcaatatatcacagggatacttgcacgtcagttttt
atatacaatagataaataaggaaacaacctagataaccaaggacagagta
gtggataaaagtacaaaatggaaaaaaagtttaaccataaagattgaatt
atattgttaaaaggaaaatggaggtaactggcaataatcacataaagcta
gttaaatatcatgtaatttctcttagatgtgtttcctagattttgtgtag
atgcataaaatcatgtataagacataaaagtacaagtgaaattatctaaa
ctggagagaatggaggagaagggacaaggaaggaagataggtatggagga
gcaaatatgttcaacacacagtatacactcgtatgagaatggatttatgt
tatgcaataacatgtacaatgagtaaaaaaaatggattgtttttagaaag
tcctttgaacaatgtaacttcagaagcccaccaaaattacaaatataact
attactaaaacatttaagtggaacgctcttgaaactcctgaaccttgact
tgggcatatactgtcattttctgagttgtcttcactctcttgtaacagtc
atacttaaatcttatttttaattttattgcctcatctattgcctaatgta
agaaatctagttaattcattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_43283619_43284733
seq2: B6Ng01-219H20.g_67_1187 (reverse)

seq1  CAATGAATTTAACTAGGTTTTCTTACATTAG--CATAGATGAGGC-ATAA  47
      ||||||| ||||||| | |||||||||||||   ||||||||||| ||||
seq2  CAATGAA-TTAACTA-GATTTCTTACATTAGGCAATAGATGAGGCAATAA  48

seq1  AAT--AAAAT-AGATTTAAGTATGACTGTTACAAGAGAGTG-AGAC-ACT  92
      |||  ||||| |||||||||||||||||||||||||||||| |||| |||
seq2  AATTAAAAATAAGATTTAAGTATGACTGTTACAAGAGAGTGAAGACAACT  98

seq1  CAGGAAATGACAGTATATGCCCAAGTCAAGGTTCAGGAGTTTCAAGAGCG  142
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATGACAGTATATGCCCAAGTCAAGGTTCAGGAGTTTCAAGAGCG  148

seq1  TTCCACTTAAATGTTTTAGTAATAGTTATATTTGTAATTTTGGTGGGCTT  192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTTAAATGTTTTAGTAATAGTTATATTTGTAATTTTGGTGGGCTT  198

seq1  CTGAAGTTACATTGTTCAAAGGACTTTCTAAAAACAATCCATTTTTTTTA  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTTACATTGTTCAAAGGACTTTCTAAAAACAATCCATTTTTTTTA  248

seq1  CTCATTGTACATGTTATTGCATAACATAAATCCATTCTCATACGAGTGTA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTGTACATGTTATTGCATAACATAAATCCATTCTCATACGAGTGTA  298

seq1  TACTGTGTGTTGAACATATTTGCTCCTCCATACCTATCTTCCTTCCTTGT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGTGTTGAACATATTTGCTCCTCCATACCTATCTTCCTTCCTTGT  348

seq1  CCCTTCTCCTCCATTCTCTCCAGTTTAGATAATTTCACTTGTACTTTTAT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTCCTCCATTCTCTCCAGTTTAGATAATTTCACTTGTACTTTTAT  398

seq1  GTCTTATACATGATTTTATGCATCTACACAAAATCTAGGAAACACATCTA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTATACATGATTTTATGCATCTACACAAAATCTAGGAAACACATCTA  448

seq1  AGAGAAATTACATGATATTTAACTAGCTTTATGTGATTATTGCCAGTTAC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAATTACATGATATTTAACTAGCTTTATGTGATTATTGCCAGTTAC  498

seq1  CTCCATTTTCCTTTTAACAATATAATTCAATCTTTATGGTTAAACTTTTT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTTTCCTTTTAACAATATAATTCAATCTTTATGGTTAAACTTTTT  548

seq1  TTCCATTTTGTACTTTTATCCACTACTCTGTCCTTGGTTATCTAGGTTGT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTTGTACTTTTATCCACTACTCTGTCCTTGGTTATCTAGGTTGT  598

seq1  TTCCTTATTTATCTATTGTATATAAAAACTGACGTGCAAGTATCCCTGTG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTATTTATCTATTGTATATAAAAACTGACGTGCAAGTATCCCTGTG  648

seq1  ATATATTGACTTGGACTCCTTTGGGTAAATACTCATGCATTGTCTACTTA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTGACTTGGACTCCTTTGGGTAAATACTCATGCATTGTCTACTTA  698

seq1  GATCAGAGGGTAGATCTATTTTCTTTCCCATATAATAGAACAGATAAGGG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGAGGGTAGATCTATTTTCTTTCCCATATAATAGAACAGATAAGGG  748

seq1  TTTCTTTTTGCAAGTGTTTTTATGCTTATCATTCAGAATGAAGAAACCCT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTGCAAGTGTTTTTATGCTTATCATTCAGAATGAAGAAACCCT  798

seq1  GAAGTAAAGGAGGACAGTGAAAAATTCTGGACTATTATATGTTGATGATA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAAAGGAGGACAGTGAAAAATTCTGGACTATTATATGTTGATGATA  848

seq1  GGAAAGAAATTTGCTTAATTTGGGATATTTGTCACAAAACAAATCGTGGA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAAATTTGCTTAATTTGGGATATTTGTCACAAAACAAATCGTGGA  898

seq1  AACATACTCATTTTTAGCCATTCTGTGCTTTCACTATTCAAATTTACAAC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATACTCATTTTTAGCCATTCTGTGCTTTCACTATTCAAATTTACAAC  948

seq1  CACACACCAAGCACTCAGGCCTCACCAGTATACTAATAAAAATTAAATAC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACCAAGCACTCAGGCCTCACCAGTATACTAATAAAAATTAAATAC  998

seq1  AAATAATTCACACATAAGAAAGCAAGACAGTATGTTTTGGATGCTTGTTC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATTCACACATAAGAAAGCAAGACAGTATGTTTTGGATGCTTGTTC  1048

seq1  TCCTATGTGAGGACCCTTGTGTGATAGTTTCTATTACTAAGATCTTTTCT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATGTGAGGACCCTTGTGTGATAGTTTCTATTACTAAGATCTTTTCT  1098

seq1  TCTTTCTCTCTTTCAAGGAATTC  1115
      |||||||||||||||||||||||
seq2  TCTTTCTCTCTTTCAAGGAATTC  1121