BAC Information

Click to search

BAC

Clone NameB6Ng01-219P07
Chromosome15 (Build37)
Map Location 25,079,953 - 25,081,143
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666989, LOC666999, LOC100040492, LOC100040499, LOC100040529, 9230109A22Rik
Downstream gene4930445E18Rik, Basp1, EG432939, LOC100040583, Myo10, LOC100040602, Ppia-ps15_175.1, 1810015C04Rik, Zfp622
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219P07.bB6Ng01-219P07.g
ACCGA035642GA035643
length1,185776
definitionB6Ng01-219P07.b B6Ng01-219P07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgaaacatgccacaatatacctgaagcttgaagatgagtgaaat
tagactgtcatggaaaggaggaggctgtatgagcctgttactaggaggtg
tctagagtatccgaaggcacaaaaagaggacttgttgctcaatgggtgtg
tcctagtttaacttctgttgtgtgacaaatgtccaggtcagaagcaactt
agaggagggaaggcttaacttgatttatagttcaaggctgcagtccagca
ggaacttaagcaactagttacagatattcacagtaaagagcaaagagaat
aactacacacattgcttgcttgcttgcttgcttgcttgcttgcttgcttg
cttgcttgcttgcttgcttgcttgcataaaactaggattcttctgtcata
tagttcaggactctcctgcctagagaatggtatcctccattaaggagagt
attgccaaactcctcttaagtcctttactatgtagatacttaaagtttat
ctccaaaacagaataaataacatgtgccactttcaatattctttcaggga
aaatactaacttttgttagtatcagtcttactaagccttatccaaaagtt
gataccacacatcagaatgaggaagacagttaaattgtaactttgcttta
accttcggaaaggagtggttttgaaagcaaggagaaattttactttttgt
catgtgttcttgagctcaccaacttacgctctcacatttagtattttatc
atgcagaatatatgcagcacataaaattagaaattatctcagccaagtat
ttaatctatctgtatgaatagaaaagtgttaccaacatcagttgctgaac
aataacatcccagtacattatatttatttgcaaatttcaaaatacccatg
tgaccttatgattatgtctattttatgtcgcttcatcatgtagaaagtat
tcatatcgaattgtaacacattgaaataaatggaaaagcccactaaacaa
accagctaagacacacacagtcttgctacagctgatcagtagtgctaggc
agttagtggtgcttagaaatggcatgagacttactgggcttttctattgt
aaagcatttctgcactattgagaaccacaggaggagatcacctcagtttg
tttataaatgtagagagaaatagtactgaattatg

gaattctctcctccccacctgctccttgtggtcctaagcctggcaaatct
aaaacctccacctatgtctctcctcttcagcgattggaatttttatttac
caatcagaattaactgggtgcaggttcccagaagcttagcattagaatac
aaacagctacatcttaggtcctagggggtggggatggggctcctgtagct
gttttgctaataatccttttttaaaactgtcttctagatatttatgttta
tatccatagatctgagccattctcaattttggtcagaaaagcttcttttt
gcactcagcaggcagtggttaaggtacagaaccataactgatcaaaatgt
catgaataagtgaccgttaagtcatctatagatggagaagtaccaagctg
caattccctcctagtgagtgtctcaaatccagttatgtagctggtgatat
ctattaaaggcatatgtggcagtattacatccttagggatatcgtgccag
gcgggtcattggtgggattcataggcatttagattgggtaggattagtgg
ttacttttcttcttttggcaacttgcatagtacctctggatactaagaga
cctggacctgagggaggaagatccgaggtcaattctaaaccccagtatgt
ggtgttatcagcaataagttctcaccttataacaataagttcttgccttg
ggttgaaaatcaagagcaatgaaaagaacctgtattgttttggcatggtc
tgctgatagatagtgtcttctatgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_25079953_25081143
seq2: B6Ng01-219P07.b_50_1234

seq1  GAATTCTGAAACATGCCACAATATACCTGAAGCTTGAAGATGAGTGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAAACATGCCACAATATACCTGAAGCTTGAAGATGAGTGAAAT  50

seq1  TAGACTGTCATGGAAAGGAGGAGGCTGTATGAGCCTGTTACTAGGAGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTGTCATGGAAAGGAGGAGGCTGTATGAGCCTGTTACTAGGAGGTG  100

seq1  TCTAGAGTATCCGAAGGCACAAAAAGAGGACTTGTTGCTCAATGGGTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAGTATCCGAAGGCACAAAAAGAGGACTTGTTGCTCAATGGGTGTG  150

seq1  TCCTAGTTTAACTTCTGTTGTGTGACAAATGTCCAGGTCAGAAGCAACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGTTTAACTTCTGTTGTGTGACAAATGTCCAGGTCAGAAGCAACTT  200

seq1  AGAGGAGGGAAGGCTTAACTTGATTTATAGTTCAAGGCTGCAGTCCAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGGGAAGGCTTAACTTGATTTATAGTTCAAGGCTGCAGTCCAGCA  250

seq1  GGAACTTAAGCAACTAGTTACAGATATTCACAGTAAAGAGCAAAGAGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTTAAGCAACTAGTTACAGATATTCACAGTAAAGAGCAAAGAGAAT  300

seq1  AACTACACACATTGCTTGCTTGCTTGCTTGCTTGCTTGCTTGCTTGCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACACACATTGCTTGCTTGCTTGCTTGCTTGCTTGCTTGCTTGCTTG  350

seq1  CTTGCTTGCTTGCTTGCTTGCTTGCATAAAACTAGGATTCTTCTGTCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTGCTTGCTTGCTTGCTTGCATAAAACTAGGATTCTTCTGTCATA  400

seq1  TAGTTCAGGACTCTCCTGCCTAGAGAATGGTATCCTCCATTAAGGAGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCAGGACTCTCCTGCCTAGAGAATGGTATCCTCCATTAAGGAGAGT  450

seq1  ATTGCCAAACTCCTCTTAAGTCCTTTACTATGTAGATACTTAAAGTTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCAAACTCCTCTTAAGTCCTTTACTATGTAGATACTTAAAGTTTAT  500

seq1  CTCCAAAACAGAATAAATAACATGTGCCACTTTCAATATTCTTTCAGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAAACAGAATAAATAACATGTGCCACTTTCAATATTCTTTCAGGGA  550

seq1  AAATACTAACTTTTGTTAGTATCAGTCTTACTAAGCCTTATCCAAAAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTAACTTTTGTTAGTATCAGTCTTACTAAGCCTTATCCAAAAGTT  600

seq1  GATACCACACATCAGAATGAGGAAGACAGTTAAATTGTAACTTTGCTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCACACATCAGAATGAGGAAGACAGTTAAATTGTAACTTTGCTTTA  650

seq1  ACCTTCGGAAAGGAGTGGTTTTGAAAGCAAGGAGAAATTTTACTTTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCGGAAAGGAGTGGTTTTGAAAGCAAGGAGAAATTTTACTTTTTGT  700

seq1  CATGTGTTCTTGAGCTCACCAACTTACGCTCTCACATTTAGTATTTTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTTCTTGAGCTCACCAACTTACGCTCTCACATTTAGTATTTTATC  750

seq1  ATGCAGAATATATGCAGCACATAAAATTAGAAATTATCTCAGCCAAGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAATATATGCAGCACATAAAATTAGAAATTATCTCAGCCAAGTAT  800

seq1  TTAATCTATCTGTATGAATAGAAAAGTGTTACCAACATCAGTTGCTGAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTATCTGTATGAATAGAAAAGTGTTACCAACATCAGTTGCTGAAC  850

seq1  AATAACATCCCAGTACATTATATTTATTTGCAAATTTCAAAATACCCATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACATCCCAGTACATTATATTTATTTGCAAATTTCAAAATACCCATG  900

seq1  TGACCTTATGATTATGTCTATTTTATGTCGCTTCATCATGTAGAAAGTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTATGATTATGTCTATTTTATGTCGCTTCATCATGTAGAAAGTAT  950

seq1  TCATATCGAATTGTAACACATTGAAATAAATGGAAAAGCCCACTAAACAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATCGAATTGTAACACATTGAAATAAATGGAAAAGCCCACTAAACAA  1000

seq1  ACCAGCTAAGACAACAACACAGTCCTGCTACCAGCTGATCAGTAGTGCCT  1050
      |||||||||||||   |||||||| ||||| |||||||||||||||| ||
seq2  ACCAGCTAAGACA--CACACAGTCTTGCTA-CAGCTGATCAGTAGTG-CT  1046

seq1  AGGCAGTTAGTGGTGCTTAGAAATGGCATGAGACTTACTGGG--TTTCTA  1098
      ||||||||||||||||||||||||||||||||||||||||||  ||||||
seq2  AGGCAGTTAGTGGTGCTTAGAAATGGCATGAGACTTACTGGGCTTTTCTA  1096

seq1  TGTTAAGGCA-TTCTGCACTA-TGAGAA-CACAGGAGGAGATCACCTCAG  1145
      |  ||| ||| |||||||||| |||||| |||||||||||||||||||||
seq2  TTGTAAAGCATTTCTGCACTATTGAGAACCACAGGAGGAGATCACCTCAG  1146

seq1  TTTGGTTATAAAATGTTAAGAAGGAGAAAATAGTACCTGAATTATG  1191
      |||| |||| ||||||  |||  ||| |||||||| ||||||||||
seq2  TTTGTTTAT-AAATGT--AGA--GAG-AAATAGTA-CTGAATTATG  1185


| Home | SequenceCutter | Blast | Download |