BAC Information

Click to search

BAC

Clone NameB6Ng01-222E13
Chromosome15 (Build37)
Map Location 47,218,785 - 47,219,301
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039438
Downstream geneLOC665130, LOC100039485, LOC100039493, Csmd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222E13.bB6Ng01-222E13.g
ACCGA037344GA037345
length1,226511
definitionB6Ng01-222E13.b B6Ng01-222E13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggccaatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaacagagaactcctaaacc
tgataaacagcttcgttgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctactcaaagaataaacaggctgagaaagaaattag
ggaaacaacactcttctcaatagccacaaataatataaaatatctcggcg
tgactctaacgaaggaagtgaaagatctgtatgataaaaacttcaagtcc
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggaccaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccattaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
gaggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtggaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ccaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg
cacaactggttgttatcatgtagagatgcgatcgatccatacttatctcc
ttgtactaagtcaaatctaagtggatcagaacttcacataaaaccagaga
cactgaaacttatagagagaaagtgggaaaagctgagatattggcacagg
gaaaatcctgaacgaaagcatgcttgtgctgtagatcgaatggacatggg
aactatgaactcaagtttcgcaggcaagactgtctgacagactcccaccg
tactggaagagatcttactctactcc
cccatggtctaatggcccagacccaggctttggttgactatgttttatat
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatctgtgtgtgtgtgtca
gtgcctatgtgcctgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgt
gtgtgagtctgtgtgtatctgtgtgtgtgtgtgtgtgcagatacatgtgt
atacatttattattttgaaatataaaatcagacaaaagtgaaattaattg
tatttcctaatatgacacacattatttataagcttttccaaaggcctgct
ctagttgatttacactgtgatacttaggaggtcagttcagaaccttttag
aaaattccactggacccctcccctctggaaggggaaggctaattaacatt
ctgcagaatggtctgacctgtcacttgcaggggtgtagggggaggcctag
agcaagtaaacacactctacagagcaaacagatcatcggccacctgtggg
ggggggggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_47218785_47219301
seq2: B6Ng01-222E13.g_67_583 (reverse)

seq1  ACCCCCCCCCCCCCACAGGTGGCCGATGATCTGTCTGCTCTGTAGAGTGT  50
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACCCCCCCCCCCCCACAGGTGGCCGATGATCTGTTTGCTCTGTAGAGTGT  50

seq1  GTTTACTTGCTCTAGGCCTCCCCCTACACCCCTGCAAGTGACAGGTCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTTGCTCTAGGCCTCCCCCTACACCCCTGCAAGTGACAGGTCAGA  100

seq1  CCATTCTGCAGAATGTTAATTAGCCTTCCCCTTCCAGAGGGGAGGGGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTGCAGAATGTTAATTAGCCTTCCCCTTCCAGAGGGGAGGGGTCC  150

seq1  AGTGGAATTTTCTAAAAGGTTCTGAACTGACCTCCTAAGTATCACAGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAATTTTCTAAAAGGTTCTGAACTGACCTCCTAAGTATCACAGTGT  200

seq1  AAATCAACTAGAGCAGGCCTTTGGAAAAGCTTATAAATAATGTGTGTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAACTAGAGCAGGCCTTTGGAAAAGCTTATAAATAATGTGTGTCAT  250

seq1  ATTAGGAAATACAATTAATTTCACTTTTGTCTGATTTTATATTTCAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGAAATACAATTAATTTCACTTTTGTCTGATTTTATATTTCAAAAT  300

seq1  AATAAATGTATACACATGTATCTGCACACACACACACACACAGATACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATGTATACACATGTATCTGCACACACACACACACACAGATACACA  350

seq1  CAGACTCACACACACACACAGACACACACACACACACACACACACACAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTCACACACACACACAGACACACACACACACACACACACACACAGG  400

seq1  CACATAGGCACTGACACACACACACAGATACACACACACACACACACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGGCACTGACACACACACACAGATACACACACACACACACACACA  450

seq1  CACACACACACATATAAAACATAGTCAACCAAAGCCTGGGTCTGGGCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACATATAAAACATAGTCAACCAAAGCCTGGGTCTGGGCCAT  500

seq1  TAGACCATGGGGAATTC  517
      |||||||||||||||||
seq2  TAGACCATGGGGAATTC  517