BAC Information

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BAC

Clone NameB6Ng01-222F17
Chromosome15 (Build37)
Map Location 96,815,957 - 96,816,432
singlet/doubletsinglet
Overlap genenone
Upstream geneD030018L15Rik, LOC100043335, EG667869, LOC667874, LOC667894, Arid2, Sfrs2ip, Slc38a1, Slc38a2, LOC667941, LOC546651
Downstream geneSlc38a4, Amigo2, BC038822, LOC100043354, LOC100042774, D15Ertd682e, Pp11r, Rapgef3, 4930570C03Rik, Hdac7a, Vdr, Tmem106c, Col2a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222F17.bB6Ng01-222F17.g
ACCGA037398GA037399
length4701,177
definitionB6Ng01-222F17.b B6Ng01-222F17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
cttcatagggaaaatagtttctctgcattgtgtcgactgctgccttctga
gcttgagtagaaataaccacgtggtcttctccaatccttcagcaagcata
taattgaatgctttcagtgggcgaagccaatcatgatcccaattacaccc
aagaagggatttgaagtaaacgagaacacagaggcttcctatgaagagat
taagatcaacttgggagctataaaacaggcagataattacttaatggtaa
taaagaacacggagagcatcaacacgagctgcacacgtgcgcaggaagtg
ctgtgtcatctgttgtggagcagaagtagctccctgggaaaggaaattgg
agtgatattcagaatatggagaagggcatgtcttggctatgaactatgga
agcttggaaactgagggcagtgaggaggaggggaagaaaggagggataga
cagagatgaagggaggaagg
gaattcttacctgaggaatactgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacagccctgagat
tccacctcacaccagtcagaatggctaagatcataaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactccttcattgttggtg
gcattgcaagcttgtacaacctctctggaaatcagtctggcagttcctca
gaaaattggacatagtactactggaggatcccgcaatacctctcctgggc
atatatccagatgtcccaaccggtaagaaggacacatgctccactatgtt
catagcagccttatttataatagccagaagctggaaagaacccagatacc
cctcaacagaggaatggatacaaaaaatgtggtacatttactcaatagag
tactactcagctattaaaaagaatgaatttatgaaattcctaggcaaatg
gttggacctggagggcatcatcctgagtgaggtaacacaatcacaaaata
actcaaatgatatgtactcactgataagtggatattaccccagaaactta
gtatacccgagatataagagacaatttgtaaaacacatgaaactgaagaa
gaacgaagaccaaagtttggacactttccccttcttagaattggaaacaa
tcacccatgaaaggagttacagagacaaagtttggagctgagacaaaagg
atggaccatcgagagactgccatatccaggcatccatcccataattagcc
tccaaatgatgacaccattgcatacactagcaagtgtttgctgaaaggac
cctgttatagctgtctcttgtgagactagtccgggggcctagcaaacaca
taaatggatgctcacactcagcttattggatggatcacagggctcccaat
ggaggagctagagaaagtatccaggagctaaagagatctgtaacctgtag
gtgcacacatatgactacagtacccgagctcttgactctagctgcatatg
tatcaaagatgctagtagtcatcactgaaggaagtcatttaaaccgcact
ttatattggcccagtacagacctatctaactggaattgcctgcgcaggca
cgtctctgctgatcgatactagatcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_96815957_96816432
seq2: B6Ng01-222F17.b_48_523 (reverse)

seq1  CCTTCCTCCCTTCATCTCTGTCTATCCCTCCTTTCTTCCCCTCCTCCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTCCCTTCATCTCTGTCTATCCCTCCTTTCTTCCCCTCCTCCTCA  50

seq1  CTGCCCTCAGTTTCCAAGCTTCCATAGTTCATAGCCAAGACATGCCCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTCAGTTTCCAAGCTTCCATAGTTCATAGCCAAGACATGCCCTTC  100

seq1  TCCATATTCTGAATATCACTCCAATTTCCTTTCCCAGGGAGCTACTTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATTCTGAATATCACTCCAATTTCCTTTCCCAGGGAGCTACTTCTG  150

seq1  CTCCACAACAGATGACACAGCACTTCCTGCGCACGTGTGCAGCTCGTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAACAGATGACACAGCACTTCCTGCGCACGTGTGCAGCTCGTGTT  200

seq1  GATGCTCTCCGTGTTCTTTATTACCATTAAGTAATTATCTGCCTGTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTCTCCGTGTTCTTTATTACCATTAAGTAATTATCTGCCTGTTTTA  250

seq1  TAGCTCCCAAGTTGATCTTAATCTCTTCATAGGAAGCCTCTGTGTTCTCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCCCAAGTTGATCTTAATCTCTTCATAGGAAGCCTCTGTGTTCTCG  300

seq1  TTTACTTCAAATCCCTTCTTGGGTGTAATTGGGATCATGATTGGCTTCGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTCAAATCCCTTCTTGGGTGTAATTGGGATCATGATTGGCTTCGC  350

seq1  CCACTGAAAGCATTCAATTATATGCTTGCTGAAGGATTGGAGAAGACCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGAAAGCATTCAATTATATGCTTGCTGAAGGATTGGAGAAGACCAC  400

seq1  GTGGTTATTTCTACTCAAGCTCAGAAGGCAGCAGTCGACACAATGCAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTATTTCTACTCAAGCTCAGAAGGCAGCAGTCGACACAATGCAGAG  450

seq1  AAACTATTTTCCCTATGAAGGAATTC  476
      ||||||||||||||||||||||||||
seq2  AAACTATTTTCCCTATGAAGGAATTC  476