BAC Information

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BAC

Clone NameB6Ng01-222I14
Chromosome15 (Build37)
Map Location 65,682,584 - 65,683,740
singlet/doubletsinglet
Overlap geneC920006C10Rik
Upstream geneAdcy8, LOC268812, LOC100040790, LOC665836
Downstream geneOc90, F930104E18Rik, LOC100040835, Kcnq3, Lrrc6, LOC100040860, Tmem71, LOC100040881, Phf20l1, Tg, Sla
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222I14.bB6Ng01-222I14.g
ACCGA037526GA037527
length1,1671,190
definitionB6Ng01-222I14.b B6Ng01-222I14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagactgaaaccacagaacatctcctgcgcccaaacgtgaaacac
agaggatataaaaggatgcataggaaaggtctctgaaatgaatttcaaag
acactggttggaaaaaccagtccctgctattccttgacaggaggtaaatg
aaaatagtgtatcttaaataggatctgacattccagtcaacagcagctga
tatgccaacatggatggagggaatctcacaaggccacagccactagatga
agagctacagggaatcagagactgctgaaaggaagaattaatcttcccca
gagacaagcttcctatattgccaactctaaaacatatacatatcagcaat
aaatggactcagcaagcttcatttgttaattcatttgcatatatatgtaa
tgataataaataaagaatcaaagcccattaatttgaaggcaaggattcgg
gaagaaagggttggagggaggggaaaaataaagtacctacattttaatta
aaaattaagaaaggaaaaagtgagcatatttatcacacagtactggagga
ctgctgttattcctttttctgttatgtattgccactaaaaacattaaaac
aacaaatgtcagcaaccagccactatctggtcagtttatagaagccacta
ccgattgtcatgtctgaattctagtcttggagtcattgaccttggacttt
ttcaactctgtctgcctatcccctttaagcatagtacatatctttatcta
caaaatgttccagtacagtagtagtctctgactactgtaaacttgttcat
aatgaagatcaaacaaaatgccaggacagaagagcatcctagtgagaagt
ccggcagaatggaagatgaagggagaggtactcagtgcacaaatgcagaa
ataaccaggttcttactgaggacggaaggacggaagctggcagcgatgcc
acttttgtcagtaatttaagggatgtgccccacacatctgttcaattcct
accatgagcaaagatctcagcagcattatctgatctctggtcccaaatcc
ctaaacatacaaagtatggtgtactactatattatattatagtcatctac
taaaatactttttttattttgaacctttattccatggcctaaaatgaata
ttattctacattggcta
gaattctctttaatagggacggggtttcgttttctctttctcttgcttct
tgctctcttgcttcttgcactctgctcctgaagatgtaagcaataaagct
ttgccgcagaagattctggtctgtggtgttcttcctggccggtcgtgaga
acgcgtctaataacagatgaccaccaagaatagaattggagtggctcaac
ctgagcttagagtgatacagagagcagagctagagaagtgacccaagccc
tttgtaggtacccagaagatcaagtatgaatcccagacattggaacaaga
aactgtaaagttgaagttgccttggatatgcaaagttgttagagatgtca
gtgccatgggatgcctgccaaggaaagctgctacattacaagggaatgta
atcatcctcagagaatgaagtttgttgctgttgaatgccagatctgccaa
cagcatgcaacagtatgaaagacattggagatctaaagagcacttggaca
tgggacatggagatgtggtgtttggagtttgaccagttggtttttgatct
tgctttagtccagtatttccttgctatgaaaattttaagggcaatatatc
cttcgccatgagatgttggagatatgtaatctacttttttgattttgatt
ttataagagattacagttaagcaatttgatgactcttaggataaactttg
atctttggattttttaacatttttgatggcatgatagtctatgaggaatt
tgaagttagactaaatgtattttggattatgctatggtatgtcccccata
gattcatgtgtttgaaaaagcctggccagggaggagaatgtggtgtattg
catatgcttggcctaggtagtggctctatgaggaaacatggccttcttgg
cataggtgtggacttcttggagtgggtgaggccttgttagaggaagtgtg
ccactgtgggagtgggctttgagactgtctcctagccacataataagtca
gtgttttctgtggctcaaataaggtgtagaagtctcagctactcagtgcc
tatgcctgtcagaagctgcattgtttctgcctggaatgaatcatggcact
ggacttctggaaccctaataagtcagtcctattaacgtatggtcgtttaa
gaaattccctcggggtaatgggtgttccctctgattaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_65682584_65683740
seq2: B6Ng01-222I14.b_47_1213 (reverse)

seq1  --------------------------TAGCCAATGAGAATAAAGTTTTAA  24
                                ||| | ||| |||||||| || ||
seq2  TAGCCAATGTAGAATAATATTCATTTTAGGCCATG-GAATAAAGGTTCAA  49

seq1  AATAAAAAAAGTATTTTAAGTAGATGAAATTATAAATATAAATTATTAGT  74
      ||||||||||||||||| ||||||||  | ||| |||||||  || ||||
seq2  AATAAAAAAAGTATTTT-AGTAGATG--ACTAT-AATATAA--TA-TAGT  92

seq1  AGTAACACCAATACTTTGTATGTTTTAGGGATTTGGGAACCAGGAGGATT  124
      ||| ||||| |||||||||||| |||||||||||||| |||| |||   |
seq2  AGT-ACACC-ATACTTTGTATG-TTTAGGGATTTGGG-ACCA-GAG--AT  135

seq1  CAGATAATGCTGCTGAGATCTTTGCTCATGGTAAGGAATTGAACAGATGT  174
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAGATAATGCTGCTGAGATCTTTGCTCATGGT-AGGAATTGAACAGATGT  184

seq1  GTGGGGCACATCCCTTAAATTACTGACAAAAGTGGCATCGCTGCCAGCTT  224
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGCACATCCCTTAAATTACTGACAAAAGTGGCATCGCTGCCAGCTT  234

seq1  CCGTCCTTCCGTCCTCAGTAAGAACCTGGTTATTTCTGCATTTGTGCACT  274
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCCTTCCGTCCTCAGTAAGAACCTGGTTATTTCTGCATTTGTGCACT  284

seq1  GAGTACCTCTCCCTTCATCTTCCATTCTGCCGGACTTCTCACTAGGATGC  324
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACCTCTCCCTTCATCTTCCATTCTGCCGGACTTCTCACTAGGATGC  334

seq1  TCTTCTGTCCTGGCATTTTGTTTGATCTTCATTATGAACAAGTTTACAGT  374
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGTCCTGGCATTTTGTTTGATCTTCATTATGAACAAGTTTACAGT  384

seq1  AGTCAGAGACTACTACTGTACTGGAACATTTTGTAGATAAAGATATGTAC  424
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGAGACTACTACTGTACTGGAACATTTTGTAGATAAAGATATGTAC  434

seq1  TATGCTTAAAGGGGATAGGCAGACAGAGTTGAAAAAGTCCAAGGTCAATG  474
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTTAAAGGGGATAGGCAGACAGAGTTGAAAAAGTCCAAGGTCAATG  484

seq1  ACTCCAAGACTAGAATTCAGACATGACAATCGGTAGTGGCTTCTATAAAC  524
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAAGACTAGAATTCAGACATGACAATCGGTAGTGGCTTCTATAAAC  534

seq1  TGACCAGATAGTGGCTGGTTGCTGACATTTGTTGTTTTAATGTTTTTAGT  574
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAGATAGTGGCTGGTTGCTGACATTTGTTGTTTTAATGTTTTTAGT  584

seq1  GGCAATACATAACAGAAAAAGGAATAACAGCAGTCCTCCAGTACTGTGTG  624
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATACATAACAGAAAAAGGAATAACAGCAGTCCTCCAGTACTGTGTG  634

seq1  ATAAATATGCTCACTTTTTCCTTTCTTAATTTTTAATTAAAATGTAGGTA  674
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATGCTCACTTTTTCCTTTCTTAATTTTTAATTAAAATGTAGGTA  684

seq1  CTTTATTTTTCCCCTCCCTCCAACCCTTTCTTCCCGAATCCTTGCCTTCA  724
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTTTTCCCCTCCCTCCAACCCTTTCTTCCCGAATCCTTGCCTTCA  734

seq1  AATTAATGGGCTTTGATTCTTTATTTATTATCATTACATATATATGCAAA  774
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATGGGCTTTGATTCTTTATTTATTATCATTACATATATATGCAAA  784

seq1  TGAATTAACAAATGAAGCTTGCTGAGTCCATTTATTGCTGATATGTATAT  824
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTAACAAATGAAGCTTGCTGAGTCCATTTATTGCTGATATGTATAT  834

seq1  GTTTTAGAGTTGGCAATATAGGAAGCTTGTCTCTGGGGAAGATTAATTCT  874
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGAGTTGGCAATATAGGAAGCTTGTCTCTGGGGAAGATTAATTCT  884

seq1  TCCTTTCAGCAGTCTCTGATTCCCTGTAGCTCTTCATCTAGTGGCTGTGG  924
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCAGCAGTCTCTGATTCCCTGTAGCTCTTCATCTAGTGGCTGTGG  934

seq1  CCTTGTGAGATTCCCTCCATCCATGTTGGCATATCAGCTGCTGTTGACTG  974
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGAGATTCCCTCCATCCATGTTGGCATATCAGCTGCTGTTGACTG  984

seq1  GAATGTCAGATCCTATTTAAGATACACTATTTTCATTTACCTCCTGTCAA  1024
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTCAGATCCTATTTAAGATACACTATTTTCATTTACCTCCTGTCAA  1034

seq1  GGAATAGCAGGGACTGGTTTTTCCAACCAGTGTCTTTGAAATTCATTTCA  1074
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAGCAGGGACTGGTTTTTCCAACCAGTGTCTTTGAAATTCATTTCA  1084

seq1  GAGACCTTTCCTATGCATCCTTTTATATCCTCTGTGTTTCACGTTTGGGC  1124
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCTTTCCTATGCATCCTTTTATATCCTCTGTGTTTCACGTTTGGGC  1134

seq1  GCAGGAGATGTTCTGTGGTTTCAGTCTGAATTC  1157
      |||||||||||||||||||||||||||||||||
seq2  GCAGGAGATGTTCTGTGGTTTCAGTCTGAATTC  1167