BAC Information

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BAC

Clone NameB6Ng01-225H05
Chromosome15 (Build37)
Map Location 26,137,789 - 26,246,341
singlet/doubletdoublet
Overlap geneAK162044
Upstream gene4930445E18Rik, Basp1, EG432939, LOC100040583, Myo10, LOC100040602, Ppia-ps15_175.1, 1810015C04Rik, Zfp622
Downstream geneFbxl7, LOC622531, LOC625311
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225H05.bB6Ng01-225H05.g
ACCGA039641GA039642
length1,1451,070
definitionB6Ng01-225H05.b B6Ng01-225H05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,137,789 - 26,138,936)(26,245,317 - 26,246,341)
sequence
gaattctatccactcacagaagaaaaataaaaatttgtcaccaaaacatg
gaaggaacaagaaaccatgcagctacatgaaatatggcacaaattgatag
tcaagcactgtatggtttcactcacatgtgaaatatatgaaggttctgaa
tatatgagtatatttcaaaacattcaaatatattcaatatgacatatatg
agagcaatggtcaccagaagccaagagagggagagaaaagaaaaatccgg
gggagaaactgaataatgggtccaaagttacagccagttactagagtggt
aaatgcttagggcgagatgtaacctagccatcttgagttggtccacacac
agtgtagaaatcccagaagatcacaccgctgtcgtccataaagatgtgtt
atttattatatcaataacattggaaaacacttttagggagaaaaaggaat
tggatcctcactcctatatttaacaatagtccttccatgtttaaaatcag
caattcaagtttcttgcctggtgtcggagcacctgaagtaaaacttcgca
agaatcgcagatcatctatttgaaatgatacacgattcatctcattttag
gccccttcccatgtgccacgcacttacctgagtcactatcaatctatttt
gatcttttagacacaatgataaatgtctgatcttgcactgtatggaacat
ctctaaagcagaaaacaattgttcaccacactggcctttcaatagcaatt
tattttgaaactgacagtggtagtaaagggcatggtatttacaccatggc
aagagatcatcaggattttatctatttcttggtctttatgtcaatattac
tgcttatctttttatccgttttctatcaccatggagaatcctgttacttt
tttttcattattttattgtttgtaacagtatttagtttccaggcatcttt
tctaaattacgattttccagggtgatagaaacttgagctacaccatcttc
attggatccattgggaagggtgaacttagaagtctatctccaaagatgga
gcacctgtgtttgtctgtgtgtgtcttatcattgagcagtatggtctcca
gcccttccatgtttcagtgagtgacaggttttgattttggctttt

gaattcacaatcaccaggataaaaaacctacatgtccatagaagatgatg
tgtatatataaaggaacactattcagtcttattgggggaaaaaagccaaa
agaacaaaaaggacttcattacttggcacaatgtgagtgcagcttagggg
tatcatgttcagtggaataagcctggaatcaggtactaaatggcacatga
cttcacttgtgtgcacagtccacaagatactggcttattatatgtagaga
gcggaatggcagttatcagaagacaggctaagggtggagtgtaggaaagg
ggggacaggagtcactgggtaccaaactgcagttagatgcagggagcagt
ttcaccaacattctatgtgtttgcaaagagctaaaatgccatgctttaca
tagtcctaccacaaaaaaaaatgttaaatatctgatatgaatacatcagc
tggctgtatttaatcatactaattatccacgcactcaaacatctcttaat
gccccgaatgtttatacaattactattagttagttaaaaataaaacttaa
agaactatatagaaagaggacagtaactgagatttgctgacagtagaaag
aggggaacaaaaggcccctcttatgagaggggaccaggccctgttctctc
agcaggatgagcaggtaacagtgatgctagaccaaggggagatagagcta
ttctaagcatgccgtgtatatttaagacattaatcctcaaaatacgatat
ggcataggtgtcatcctcttctcctttttaaagatgcctttgctagagag
atggttcagaggctaaaggcacctgctacccagcctgatgacctgagttt
gatcttcaaaactcataacccaaaaggaaagatccaactgccacaagtgg
tctgtcctctgacctccatgagagtgcagtgacatatgcacacacacaca
cacacacacacacacacacacacacacacacatacacgagagagagagaa
agagagagagagagagagactcacacatgcaccacacctaagcaaataaa
ggtcaaatgttcaatatagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_26137789_26138936
seq2: B6Ng01-225H05.b_44_1188

seq1  GAATTCTATCCACTCACAGAAGAAAAATAAAAATTTGTCACCAAAACATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCCACTCACAGAAGAAAAATAAAAATTTGTCACCAAAACATG  50

seq1  GAAGGAACAAGAAACCATGCAGCTACATGAAATATGGCACAAATTGATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAACAAGAAACCATGCAGCTACATGAAATATGGCACAAATTGATAG  100

seq1  TCAAGCACTGTATGGTTTCACTCACATGTGAAATATATGAAGGTTCTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCACTGTATGGTTTCACTCACATGTGAAATATATGAAGGTTCTGAA  150

seq1  TATATGAGTATATTTCAAAACATTCAAATATATTCAATATGACATATATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGAGTATATTTCAAAACATTCAAATATATTCAATATGACATATATG  200

seq1  AGAGCAATGGTCACCAGAAGCCAAGAGAGGGAGAGAAAAGAAAAATCCGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAATGGTCACCAGAAGCCAAGAGAGGGAGAGAAAAGAAAAATCCGG  250

seq1  GGGAGAAACTGAATAATGGGTCCAAAGTTACAGCCAGTTACTAGAGTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAAACTGAATAATGGGTCCAAAGTTACAGCCAGTTACTAGAGTGGT  300

seq1  AAATGCTTAGGGCGAGATGTAACCTAGCCATCTTGAGTTGGTCCACACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTTAGGGCGAGATGTAACCTAGCCATCTTGAGTTGGTCCACACAC  350

seq1  AGTGTAGAAATCCCAGAAGATCACACCGCTGTCGTCCATAAAGATGTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAGAAATCCCAGAAGATCACACCGCTGTCGTCCATAAAGATGTGTT  400

seq1  ATTTATTATATCAATAACATTGGAAAACACTTTTAGGGAGAAAAAGGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTATATCAATAACATTGGAAAACACTTTTAGGGAGAAAAAGGAAT  450

seq1  TGGATCCTCACTCCTATATTTAACAATAGTCCTTCCATGTTTAAAATCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCCTCACTCCTATATTTAACAATAGTCCTTCCATGTTTAAAATCAG  500

seq1  CAATTCAAGTTTCTTGCCTGGTGTCGGAGCACCTGAAGTAAAACTTCGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCAAGTTTCTTGCCTGGTGTCGGAGCACCTGAAGTAAAACTTCGCA  550

seq1  AGAATCGCAGATCATCTATTTGAAATGATACACGATTCATCTCATTTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCGCAGATCATCTATTTGAAATGATACACGATTCATCTCATTTTAG  600

seq1  GCCCCTTCCCATGTGCCACGCACTTACCTGAGTCACTATCAATCTATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTTCCCATGTGCCACGCACTTACCTGAGTCACTATCAATCTATTTT  650

seq1  GATCTTTTAGACACAATGATAAATGTCTGATCTTGCACTGTATGGAACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTTTAGACACAATGATAAATGTCTGATCTTGCACTGTATGGAACAT  700

seq1  CTCTAAAGCAGAAAACAATTGTTCACCACACTGGCCTTTCAATAGCAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAGCAGAAAACAATTGTTCACCACACTGGCCTTTCAATAGCAATT  750

seq1  TATTTTGAAACTGACAGTGGTAGTAAAGGGCATGGTATTTACACCATGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGAAACTGACAGTGGTAGTAAAGGGCATGGTATTTACACCATGGC  800

seq1  AAGAGATCATCAGGATTTTATCTATTTCTTGGTCTTTATGTCAATATTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATCATCAGGATTTTATCTATTTCTTGGTCTTTATGTCAATATTAC  850

seq1  TGCTTATCTTTTTATCCGTTTTCTATCACCATGGAGAATCCTGTTAC-TT  899
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGCTTATCTTTTTATCCGTTTTCTATCACCATGGAGAATCCTGTTACTTT  900

seq1  TTTTTCATTATTTTATTGTTTGTAACAGTATTTAGTTTCCAGGCATCTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATTATTTTATTGTTTGTAACAGTATTTAGTTTCCAGGCATCTTT  950

seq1  TCTAAATTACGATTTTCCAGGGTGATAGAAACTTGAGCTACACCATCTTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATTACGATTTTCCAGGGTGATAGAAACTTGAGCTACACCATCTTC  1000

seq1  ATTGGATCCATTTGGGAAGGGTGAACTTAGAAGGTCTATCTCCAAAGATG  1049
      |||||||||| ||||||||||||||||||||| |||||||||||||||||
seq2  ATTGGATCCA-TTGGGAAGGGTGAACTTAGAA-GTCTATCTCCAAAGATG  1048

seq1  GAGCACCTGTGTTTGTCTGTGTGTGTCTTATTCATTGAGCAGTATGGTCT  1099
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GAGCACCTGTGTTTGTCTGTGTGTGTCTTA-TCATTGAGCAGTATGGTCT  1097

seq1  CCAGCCCCTTCCATGTTTCAGTGAGTGACAAGTTTTTGATTTT-GCTTTT  1148
      |||| |||||||||||||||||||||||| || |||||||||| ||||||
seq2  CCAG-CCCTTCCATGTTTCAGTGAGTGAC-AGGTTTTGATTTTGGCTTTT  1145


seq1: chr15_26245317_26246341
seq2: B6Ng01-225H05.g_112_1136 (reverse)

seq1  CCTATATTTAAACATTTTAACCTTTATTTTCTTA-GTGT-GTGCATGTGT  48
      |||||| || |||| ||| |||||||||| |||| |||| ||||||||||
seq2  CCTATA-TTGAACA-TTTGACCTTTATTTGCTTAGGTGTGGTGCATGTGT  48

seq1  GAGTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCGTGTATGTGTGTGTG  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCGTGTATGTGTGTGTG  98

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATATGTCACTGCACT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATATGTCACTGCACT  148

seq1  CTCATGGAGGTCAGAGGACAGACCACTTGTGGCAGTTGGATCTTTCCTTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGGAGGTCAGAGGACAGACCACTTGTGGCAGTTGGATCTTTCCTTT  198

seq1  TGGGTTATGAGTTTTGAAGATCAAACTCAGGTCATCAGGCTGGGTAGCAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTATGAGTTTTGAAGATCAAACTCAGGTCATCAGGCTGGGTAGCAG  248

seq1  GTGCCTTTAGCCTCTGAACCATCTCTCTAGCAAAGGCATCTTTAAAAAGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTTTAGCCTCTGAACCATCTCTCTAGCAAAGGCATCTTTAAAAAGG  298

seq1  AGAAGAGGATGACACCTATGCCATATCGTATTTTGAGGATTAATGTCTTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGATGACACCTATGCCATATCGTATTTTGAGGATTAATGTCTTA  348

seq1  AATATACACGGCATGCTTAGAATAGCTCTATCTCCCCTTGGTCTAGCATC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACACGGCATGCTTAGAATAGCTCTATCTCCCCTTGGTCTAGCATC  398

seq1  ACTGTTACCTGCTCATCCTGCTGAGAGAACAGGGCCTGGTCCCCTCTCAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTACCTGCTCATCCTGCTGAGAGAACAGGGCCTGGTCCCCTCTCAT  448

seq1  AAGAGGGGCCTTTTGTTCCCCTCTTTCTACTGTCAGCAAATCTCAGTTAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGGCCTTTTGTTCCCCTCTTTCTACTGTCAGCAAATCTCAGTTAC  498

seq1  TGTCCTCTTTCTATATAGTTCTTTAAGTTTTATTTTTAACTAACTAATAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCTTTCTATATAGTTCTTTAAGTTTTATTTTTAACTAACTAATAG  548

seq1  TAATTGTATAAACATTCGGGGCATTAAGAGATGTTTGAGTGCGTGGATAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGTATAAACATTCGGGGCATTAAGAGATGTTTGAGTGCGTGGATAA  598

seq1  TTAGTATGATTAAATACAGCCAGCTGATGTATTCATATCAGATATTTAAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTATGATTAAATACAGCCAGCTGATGTATTCATATCAGATATTTAAC  648

seq1  ATTTTTTTTTGTGGTAGGACTATGTAAAGCATGGCATTTTAGCTCTTTGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTTGTGGTAGGACTATGTAAAGCATGGCATTTTAGCTCTTTGC  698

seq1  AAACACATAGAATGTTGGTGAAACTGCTCCCTGCATCTAACTGCAGTTTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACATAGAATGTTGGTGAAACTGCTCCCTGCATCTAACTGCAGTTTG  748

seq1  GTACCCAGTGACTCCTGTCCCCCCTTTCCTACACTCCACCCTTAGCCTGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCAGTGACTCCTGTCCCCCCTTTCCTACACTCCACCCTTAGCCTGT  798

seq1  CTTCTGATAACTGCCATTCCGCTCTCTACATATAATAAGCCAGTATCTTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGATAACTGCCATTCCGCTCTCTACATATAATAAGCCAGTATCTTG  848

seq1  TGGACTGTGCACACAAGTGAAGTCATGTGCCATTTAGTACCTGATTCCAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGTGCACACAAGTGAAGTCATGTGCCATTTAGTACCTGATTCCAG  898

seq1  GCTTATTCCACTGAACATGATACCCCTAAGCTGCACTCACATTGTGCCAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATTCCACTGAACATGATACCCCTAAGCTGCACTCACATTGTGCCAA  948

seq1  GTAATGAAGTCCTTTTTGTTCTTTTGGCTTTTTTCCCCCAATAAGACTGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGAAGTCCTTTTTGTTCTTTTGGCTTTTTTCCCCCAATAAGACTGA  998

seq1  ATAGTGTTCCTTTATATATACACATCA  1025
      |||||||||||||||||||||||||||
seq2  ATAGTGTTCCTTTATATATACACATCA  1025


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