BAC Information

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BAC

Clone NameB6Ng01-225P06
Chromosome15 (Build37)
Map Location 83,183,803 - 83,184,986
singlet/doubletsinglet
Overlap genenone
Upstream geneNdufa6, Cyp2d22, LOC545123, Cyp2d10, Cyp2d9, EG545124, EG667196, EG667177, 9030605E09Rik, BC018285, Cyp2d13, LOC380998, LOC627860, LOC676200, 1300013D18Rik, LOC271300, Cyp2d26, Tcf20, Nfam1, Serhl, 1110014J01Rik, Poldip3, Cyb5r3, A4galt, LOC100042119, Arfgap3
Downstream genePacsin2, LOC414359, Ttll1, Bik, Mcat, Tspo, Ttll12, Scube1, Mpped1, 4931407K02Rik, LOC667167, Sult4a1, Pnpla5, Pnpla3, Samm50, Parvb, Parvg, LOC382988
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225P06.g
ACCGA040018
length1,186
definitionB6Ng01-225P06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaggtgtggtggggcacacctttagttccaccactcaggaggcag
aggttggaggatctctgtgagtttgaggccagcctggtctacagagtgaa
tttcaggacagccagggctacacagagaattcctatctcaaaaagaaaaa
caacaacaacaacaaaacaacaacaaaaaagccaaactgaacccaaacaa
acaaaaactccaaaaaacgtaaaacaacaaagtgtgggtgtggtagtttc
tggtgagcttacttcacaacagtttctttgataaacaagtgtttatttca
aactcaatgttgtacaatgtatacaatattgtgagcacacagtatgcatg
tagatatataatattcacttttccatccatccatccatccatacatacat
acatacaaacatacaaaaaaccattacccgtaatgtgtgtggtatccact
gttgtgacaaacatttgagacaactgaaatgaataaagatttattttggc
tcatggctttgttccgtggttctttggccttatggctgtaggcctgaggc
aaaactgaacaccacagaaagaaacacttggcaaagaagagtgcttccct
catgatagaatggagactgggttgagggcaagatacagtctttcagtgtc
ccacatcctacaaataggcccgatgagctaactgtcaaactatgaaataa
tcagtggattaaacctctgatgtcatcacccttatgatacaataattctt
caacagtagcacttgctgaggaaccttcaacctatcagtgctttggggtg
atatttcatacccaaatgtgataaccatgaccacctaccggaagtgtcac
acaaagttccactgatgacattcaagttccttgggcttccttgatccaga
ggctactactaccttatctggagaccacagccacactggggcttggggct
gctgtctggcttggcccttttacaaagcagtcatgttccctagttaccct
ttcgttttggccaaatattacactagtttctgagaaaggtggcccttggt
ttctgttagatcactttggagcattttggaattacctgaagtggttggcc
aaaggtactgggctttatcatgctttcgtctctgccaagggtctttcatc
ttcagcgtctgaatcacagggtctgtaggaccaggg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_83183803_83184986
seq2: B6Ng01-225P06.g_66_1251

seq1  GAATTCAGGTGTGGTGGGGCACACCTTTAGTTCCACCACTCAGGAGGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTGTGGTGGGGCACACCTTTAGTTCCACCACTCAGGAGGCAG  50

seq1  AGGTTGGAGGATCTCTGTGAGTTTGAGGCCAGCCTGGTCTACAGAGTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGGAGGATCTCTGTGAGTTTGAGGCCAGCCTGGTCTACAGAGTGAA  100

seq1  TTTCAGGACAGCCAGGGCTACACAGAGAATTCCTATCTCAAAAAGAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGACAGCCAGGGCTACACAGAGAATTCCTATCTCAAAAAGAAAAA  150

seq1  CAACAACAACAACAAAACAACAACAAAAAAGCCAAACTGAACCCAAACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAACAACAAAACAACAACAAAAAAGCCAAACTGAACCCAAACAA  200

seq1  ACAAAAACTCCAAAAAACGTAAAACAACAAAGTGTGGGTGTGGTAGTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACTCCAAAAAACGTAAAACAACAAAGTGTGGGTGTGGTAGTTTC  250

seq1  TGGTGAGCTTACTTCACAACAGTTTCTTTGATAAACAAGTGTTTATTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGCTTACTTCACAACAGTTTCTTTGATAAACAAGTGTTTATTTCA  300

seq1  AACTCAATGTTGTACAATGTATACAATATTGTGAGCACACAGTATGCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAATGTTGTACAATGTATACAATATTGTGAGCACACAGTATGCATG  350

seq1  TAGATATATAATATTCACTTTTCCATCCATCCATCCATCCATACATACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATATAATATTCACTTTTCCATCCATCCATCCATCCATACATACAT  400

seq1  ACATACAAACATACAAAAAACCATTACCCGTAATGTGTGTGGTATCCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACAAACATACAAAAAACCATTACCCGTAATGTGTGTGGTATCCACT  450

seq1  GTTGTGACAAACATTTGAGACAACTGAAATGAATAAAGATTTATTTTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGACAAACATTTGAGACAACTGAAATGAATAAAGATTTATTTTGGC  500

seq1  TCATGGCTTTGTTCCGTGGTTCTTTGGCCTTATGGCTGTAGGCCTGAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGCTTTGTTCCGTGGTTCTTTGGCCTTATGGCTGTAGGCCTGAGGC  550

seq1  AAAACTGAACACCACAGAAAGAAACACTTGGCAAAGAAGAGTGCTTCCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGAACACCACAGAAAGAAACACTTGGCAAAGAAGAGTGCTTCCCT  600

seq1  CATGATAGAATGGAGACTGGGTTGAGGGCAAGATACAGTCTTTCAGTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATAGAATGGAGACTGGGTTGAGGGCAAGATACAGTCTTTCAGTGTC  650

seq1  CCACATCCTACAAATAGGCCCGATGAGCTAACTGTCAAACTATGAAATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATCCTACAAATAGGCCCGATGAGCTAACTGTCAAACTATGAAATAA  700

seq1  TCAGTGGATTAAACCTCTGATGTCATCACCCTTATGATACAATAATTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGATTAAACCTCTGATGTCATCACCCTTATGATACAATAATTCTT  750

seq1  CAACAGTAGCACTTGCTGAGGAACCTTCAACCTATCAGTGCTTTGGGGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGTAGCACTTGCTGAGGAACCTTCAACCTATCAGTGCTTTGGGGTG  800

seq1  ATATTTCATACCCAAATGTGATAACCATGACCACCTACCGGAAGTGTCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCATACCCAAATGTGATAACCATGACCACCTACCGGAAGTGTCAC  850

seq1  ACAAAGTTCCACTGATGACATTCAAG-TCCCTGGGCTTCCTTGATCCAGA  899
      |||||||||||||||||||||||||| ||| |||||||||||||||||||
seq2  ACAAAGTTCCACTGATGACATTCAAGTTCCTTGGGCTTCCTTGATCCAGA  900

seq1  GGCTACTACTACC-TATCTGGAGACCACAGCCACACTGGGGC-TGGGGCT  947
      ||||||||||||| |||||||||||||||||||||||||||| |||||||
seq2  GGCTACTACTACCTTATCTGGAGACCACAGCCACACTGGGGCTTGGGGCT  950

seq1  GCTGTCTGGC-TGGCCC-TTTACAAAGCAGTCATGTT-CCTAG-TACCC-  992
      |||||||||| |||||| ||||||||||||||||||| ||||| ||||| 
seq2  GCTGTCTGGCTTGGCCCTTTTACAAAGCAGTCATGTTCCCTAGTTACCCT  1000

seq1  TTCCTTTTGGCCAAATA-TACACTAG-TTCTGAGAAAGGTG--CCCTGGT  1038
      ||| ||||||||||||| |||||||| ||||||||||||||  || ||||
seq2  TTCGTTTTGGCCAAATATTACACTAGTTTCTGAGAAAGGTGGCCCTTGGT  1050

seq1  TCTTGTTAGATCAATTTTGGGGGCATTTTTGAATTACCCTGAGGTGGTTG  1088
      |  |||||||||| |||  || ||||||| |||||| ||||| |||||||
seq2  TTCTGTTAGATCACTTT--GGAGCATTTTGGAATTA-CCTGAAGTGGTTG  1097

seq1  CCACAAGGTACTGGCTTTTATCTATCCTTTCTTTCTTCTGCCCAGGGTCT  1138
       |  ||||||||||  |||||| || ||||| |   |||||| |||||||
seq2  GCCAAAGGTACTGGGCTTTATC-ATGCTTTCGT--CTCTGCCAAGGGTCT  1144

seq1  AGTCCTTC--CCTCAGCTGTCTGGATCACAGGGTCTGTAGGCCCAGGG  1184
           |||  | ||||| ||||| ||||||||||||||||| ||||||
seq2  -----TTCATCTTCAGC-GTCTGAATCACAGGGTCTGTAGGACCAGGG  1186