BAC Information

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BAC

Clone NameB6Ng01-226K09
Chromosome15 (Build37)
Map Location 26,709,282 - 26,850,676
singlet/doubletdoublet
Overlap geneFbxl7
Upstream geneMyo10, Ppia-ps15_175.1, 1810015C04Rik, Zfp622, AK162044, LOC622531
Downstream geneLOC625311, Ank, BC087945, LOC100040622, BC052328, Trio
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226K09.bB6Ng01-226K09.g
ACCGA040529GA040530
length1,191961
definitionB6Ng01-226K09.b B6Ng01-226K09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,709,282 - 26,710,477)(26,849,715 - 26,850,676)
sequence
gaattccactgaaaaccttgtgcaaagagcaggtagctgctgtgtgccca
ctggatcttatcaggagaaggttctatcctgacgttttcttcttccaact
tgatgggcccagttggatttctctaagttataaacaccctgatacagctt
gcaaaatcttccattcaatattgcaccttcttccaaccagcaaaatctaa
gtcccagtctcctaggatgtctcccctctcctttcctgtgtacctcgtac
tgagaccacctgatgagacacactcgggctctactgcaattactacttaa
ctgttccatcagtgtttcccagtttgtggtcttcccataagattagattc
ctccgagagagaaataaattaacatatcaagacagatcattccttaagac
ttaaggaaaaggagggaattctgagatgctacagggtacatgctctgtct
aaatgagtacgtcaaatccaaaatgatttttaaagattcttcagggagaa
tgagatgcattttagggaagattgcccactgtgttacaaccatgtggtaa
actatggctaccatctacttctgccagcacaagtgccaatcaaaggtatt
taaatttacatcacactctttaataaatccccatttaattaagcagaaac
tactaagatgtcttaagaatgagcaaagccttcattacaaacatgtttaa
ttgtatttaaatgaatccaaatgtttatatctgaaacacactgcttatta
agtgttctcttttacagtaaagggtaaactaagaagaaataaacataaga
ttattttagaagtggtattagcatatcaaagattaaaaatattccctctc
tgaagactacatagatatatgatttggagggatgatagatgtctctatta
aatattactttaaaatggaaagaaaggggaggagtgagggagaactaatt
gtcttggagagtggtttacagtagccattacagattatctattttttgaa
gataatccttgatgaaattacagctagttgaatttatttctaaacttaac
atacaatttttgtagaatcacaattgatgagtttcacccagctaagacta
atcctaatgcaattggacatcttgtcttaattaattgaacacacttgact
ctattacagctcagtcctagagtaatggtgtgaagtgtttc
gaattcacagttgggagctaatttggtgcttcttcttcttcttcttcttc
ttcttcttcttctactactactactactacttctttttccttgtcttttt
tttttttaaagtaaatgctatctaatggagaggccctaaaccaaacctaa
ccagaaagttgtagaaataagtgtacctcaaggccaaattctctcagaag
agaataaagacaaactcagtttaaatgaaaaccaattcagaaaataaatg
atttgtaagtaaaacgatgctaaatcaaatacttactttgagtttaaagt
tcattttatttttctttttacttaaaaatatgtatttatctttattttat
gtgtacatgtgtgtgcctgcatgcatgcggtaagggtaagtgctcttaac
tgcaggacctccaattttctcttttaagaagcattttacagttagctgga
tttcacattagcttgccttctattgctgatactagacactgacaaaaggt
gttgaaggtagcacagagagtagttaattagaaactccgaggtttgctag
gcccaggcatactctgacaagagacagctatatcagggtcctttcagcat
aatcttgctagtgtatgcaatggtgtcagcatttggaagctgattatggg
atggatccccggatatgctagtgtctacatggtccatccttttatctcag
ctccaaacttgggatggatcacatggcccccaatgaaggagctagagaaa
gtaccaaagaagctaaagggatctgcaaccctataggtggaacaacatta
tgaactaaccagtaccccggagctcttgactctagctgcatatgcatcaa
aagatggcctagtcggccatcactggaaagagaggcccattggacacgca
aactttatatgccccagtacagggacgccagggccataaaaggggagtgg
gtggggtaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_26709282_26710477
seq2: B6Ng01-226K09.b_46_1236

seq1  GAATTCCACTGAAAACCTTGTGCAAAGAGCAGGTAGCTGCTGTGTGCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTGAAAACCTTGTGCAAAGAGCAGGTAGCTGCTGTGTGCCCA  50

seq1  CTGGATCTTATCAGGAGAAGGTTCTATCCTGACGTTTTCTTCTTCCAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATCTTATCAGGAGAAGGTTCTATCCTGACGTTTTCTTCTTCCAACT  100

seq1  TGATGGGCCCAGTTGGATTTCTCTAAGTTATAAACACCCTGATACAGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGGCCCAGTTGGATTTCTCTAAGTTATAAACACCCTGATACAGCTT  150

seq1  GCAAAATCTTCCATTCAATATTGCACCTTCTTCCAACCAGCAAAATCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATCTTCCATTCAATATTGCACCTTCTTCCAACCAGCAAAATCTAA  200

seq1  GTCCCAGTCTCCTAGGATGTCTCCCCTCTCCTTTCCTGTGTACCTCGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGTCTCCTAGGATGTCTCCCCTCTCCTTTCCTGTGTACCTCGTAC  250

seq1  TGAGACCACCTGATGAGACACACTCGGGCTCTACTGCAATTACTACTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACCACCTGATGAGACACACTCGGGCTCTACTGCAATTACTACTTAA  300

seq1  CTGTTCCATCAGTGTTTCCCAGTTTGTGGTCTTCCCATAAGATTAGATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCATCAGTGTTTCCCAGTTTGTGGTCTTCCCATAAGATTAGATTC  350

seq1  CTCCGAGAGAGAAATAAATTAACATATCAAGACAGATCATTCCTTAAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGAGAGAGAAATAAATTAACATATCAAGACAGATCATTCCTTAAGAC  400

seq1  TTAAGGAAAAGGAGGGAATTCTGAGATGCTACAGGGTACATGCTCTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGAAAAGGAGGGAATTCTGAGATGCTACAGGGTACATGCTCTGTCT  450

seq1  AAATGAGTACGTCAAATCCAAAATGATTTTTAAAGATTCTTCAGGGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGTACGTCAAATCCAAAATGATTTTTAAAGATTCTTCAGGGAGAA  500

seq1  TGAGATGCATTTTAGGGAAGATTGCCCACTGTGTTACAACCATGTGGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGCATTTTAGGGAAGATTGCCCACTGTGTTACAACCATGTGGTAA  550

seq1  ACTATGGCTACCATCTACTTCTGCCAGCACAAGTGCCAATCAAAGGTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGGCTACCATCTACTTCTGCCAGCACAAGTGCCAATCAAAGGTATT  600

seq1  TAAATTTACATCACACTCTTTAATAAATCCCCATTTAATTAAGCAGAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTACATCACACTCTTTAATAAATCCCCATTTAATTAAGCAGAAAC  650

seq1  TACTAAGATGTCTTAAGAATGAGCAAAGCCTTCATTACAAACATGTTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAGATGTCTTAAGAATGAGCAAAGCCTTCATTACAAACATGTTTAA  700

seq1  TTGTATTTAAATGAATCCAAATGTTTATATCTGAAACACACTGCTTATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTTAAATGAATCCAAATGTTTATATCTGAAACACACTGCTTATTA  750

seq1  AGTGTTCTCTTTTACAGTAAAGGGTAAACTAAGAAGAAATAAACATAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCTCTTTTACAGTAAAGGGTAAACTAAGAAGAAATAAACATAAGA  800

seq1  TTATTTTAGAAGTGGTATTAGCATATCAAAGATTAAAAATATTCCCTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTAGAAGTGGTATTAGCATATCAAAGATTAAAAATATTCCCTCTC  850

seq1  TGAAGACTACATAGATATATGATTTGGAGGGATGATAGATGTCTCTATTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACTACATAGATATATGATTTGGAGGGATGATAGATGTCTCTATTA  900

seq1  AATATTACTTTAAAATGGAAAG-AAGGGGAGGAGTGAGGGAGAACTAATT  949
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AATATTACTTTAAAATGGAAAGAAAGGGGAGGAGTGAGGGAGAACTAATT  950

seq1  GTCTTGGAGAGTGGTTTACAGTAGCCATTACAGATTATCTA-TTTTTGAA  998
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTCTTGGAGAGTGGTTTACAGTAGCCATTACAGATTATCTATTTTTTGAA  1000

seq1  GATAATTCCTTGATGAAATTACAGCTAGTTTGATTTTATTTCTAAACTT-  1047
      ||||| |||||||||||||||||||||| |||| ||||||||||||||| 
seq2  GATAA-TCCTTGATGAAATTACAGCTAG-TTGAATTTATTTCTAAACTTA  1048

seq1  ACATACCAATTTTGTAG-ATCACAAATTGATGAGTTTCACCCAGCTTAGA  1096
      |||||| | |||||||| ||||| |||||||||||||||||||||| |||
seq2  ACATACAATTTTTGTAGAATCAC-AATTGATGAGTTTCACCCAGCTAAGA  1097

seq1  CTAATCCTTAAATGCAAATTGGACATCTTGTCTTTATTAAATTGAACACA  1146
      ||||||||  ||||| |||||||||||||||||| ||| |||||||||||
seq2  CTAATCCT--AATGC-AATTGGACATCTTGTCTTAATT-AATTGAACACA  1143

seq1  C-TGACTCTATTACAAGCTCAAATCCCCAGAGGTAAATTGTGAAGTGTTT  1195
      | |||||||||||| |||||  |  || ||||  |   ||||||||||||
seq2  CTTGACTCTATTAC-AGCTC--AGTCCTAGAGTAATGGTGTGAAGTGTTT  1190

seq1  C  1196
      |
seq2  C  1191

seq1: chr15_26849715_26850676
seq2: B6Ng01-226K09.g_67_1027 (reverse)

seq1  CCCTA-CCCACCCACTCCCCTTTTATGGCCCTGGCGTTCCCCTGTACTGG  49
      ||||| |||||||||||||||||||||||||||||||  |||||||||||
seq2  CCCTACCCCACCCACTCCCCTTTTATGGCCCTGGCGT--CCCTGTACTGG  48

seq1  GGCATATAAAGTTTGCGTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATATAAAGTTTGCGTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCG  98

seq1  ACTAGGCCATCTTTTGATGCATATGCAGCTAGAGTCAAGAGCTCCGGGGT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGCCATCTTTTGATGCATATGCAGCTAGAGTCAAGAGCTCCGGGGT  148

seq1  ACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCAGATCCCTTTA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCAGATCCCTTTA  198

seq1  GCTTCTTTGGTACTTTCTCTAGCTCCTTCATTGGGGGCCATGTGATCCAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTTGGTACTTTCTCTAGCTCCTTCATTGGGGGCCATGTGATCCAT  248

seq1  CCCAAGTTTGGAGCTGAGATAAAAGGATGGACCATGTAGACACTAGCATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTTTGGAGCTGAGATAAAAGGATGGACCATGTAGACACTAGCATA  298

seq1  TCCGGGGATCCATCCCATAATCAGCTTCCAAATGCTGACACCATTGCATA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGGGATCCATCCCATAATCAGCTTCCAAATGCTGACACCATTGCATA  348

seq1  CACTAGCAAGATTATGCTGAAAGGACCCTGATATAGCTGTCTCTTGTCAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGCAAGATTATGCTGAAAGGACCCTGATATAGCTGTCTCTTGTCAG  398

seq1  AGTATGCCTGGGCCTAGCAAACCTCGGAGTTTCTAATTAACTACTCTCTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGCCTGGGCCTAGCAAACCTCGGAGTTTCTAATTAACTACTCTCTG  448

seq1  TGCTACCTTCAACACCTTTTGTCAGTGTCTAGTATCAGCAATAGAAGGCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACCTTCAACACCTTTTGTCAGTGTCTAGTATCAGCAATAGAAGGCA  498

seq1  AGCTAATGTGAAATCCAGCTAACTGTAAAATGCTTCTTAAAAGAGAAAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATGTGAAATCCAGCTAACTGTAAAATGCTTCTTAAAAGAGAAAAT  548

seq1  TGGAGGTCCTGCAGTTAAGAGCACTTACCCTTACCGCATGCATGCAGGCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTCCTGCAGTTAAGAGCACTTACCCTTACCGCATGCATGCAGGCA  598

seq1  CACACATGTACACATAAAATAAAGATAAATACATATTTTTAAGTAAAAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATGTACACATAAAATAAAGATAAATACATATTTTTAAGTAAAAAG  648

seq1  AAAAATAAAATGAACTTTAAACTCAAAGTAAGTATTTGATTTAGCATCGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAAATGAACTTTAAACTCAAAGTAAGTATTTGATTTAGCATCGT  698

seq1  TTTACTTACAAATCATTTATTTTCTGAATTGGTTTTCATTTAAACTGAGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTACAAATCATTTATTTTCTGAATTGGTTTTCATTTAAACTGAGT  748

seq1  TTGTCTTTATTCTCTTCTGAGAGAATTTGGCCTTGAGGTACACTTATTTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTTATTCTCTTCTGAGAGAATTTGGCCTTGAGGTACACTTATTTC  798

seq1  TACAACTTTCTGGTTAGGTTTGGTTTAGGGCCTCTCCATTAGATAGCATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACTTTCTGGTTAGGTTTGGTTTAGGGCCTCTCCATTAGATAGCATT  848

seq1  TACTTTAAAAAAAAAAAAGACAAGGAAAAAGAAGTAGTAGTAGTAGTAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAAAAAAAAAAAAGACAAGGAAAAAGAAGTAGTAGTAGTAGTAGT  898

seq1  AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCACCAAATTAGCTCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCACCAAATTAGCTCC  948

seq1  CAACTGTGAATTC  962
      |||||||||||||
seq2  CAACTGTGAATTC  961