BAC Information

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BAC

Clone NameB6Ng01-227A24
Chromosome15 (Build37)
Map Location 93,442,318 - 93,591,289
singlet/doubletdoublet
Overlap geneZfp42-ps1, LOC100042627, LOC100042631
Upstream genePdzrn4, LOC100042552, LOC100043283, Glt8d3, Yaf2, Zcrb1, Pphln1, LOC627623, Prickle1
Downstream geneD630010B17Rik, Adamts20, Pus7l, Irak4, Twf1, Tmem117
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-227A24.bB6Ng01-227A24.g
ACCGA040829GA040830
length795767
definitionB6Ng01-227A24.b B6Ng01-227A24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,590,496 - 93,591,289)(93,442,318 - 93,443,079)
sequence
gaattctagacggttcttctgagttgctttggtcacgtgacaccttttaa
gttcaggtgtaaccccatctctttctatttttcggtcactagggttcatg
agaataccagcctaaaccactaaagatgagaagccaggaagagcaaagct
atgttgctcagcagaggctcgccaaccagatagccaaccagccaccaggc
aaccttataagaccggagtaggctaaccagactaacgcctcaaagttcag
ccatgccactagggacaaaagaatctcccagtcactccataaagttgtga
aaagtaaaggcttgcattttagatgtgtcagtctttgtatttgttttgtt
gaggttacatggggcgggctttttgcagtcatttggtgtgtttccaattc
agaaattatatgtctatccttatctgttggcccaacatttttttaatcat
aaaggagtgctcatgactagcacagactgacctgacaaaccagcccaatc
cagatgaggatgagaggactactctgctatttctgatgcagctccaggtt
ataggaaatagaaggccttgctccttctacggtcctttccttctgcgatc
caaactcaaagtcactactgcctaagatttaggcttagagtaagaatggg
ggagattatagggagcaagcaagcaaggaggaccatgggatgagaaggga
ggaaaagatgaggtagagaaggaaaggaaaaggagaaagagcaaaggtaa
cgagcaaaagagaaggaaggaatggagagagtggggagggtaggc
gaattctctccttgggtttggaagtgtggattctgtatctctttaaaaaa
cgtaatatttgatcttggggaccctgggcagccgttttatactcatgaac
ggagagagcggcaccgcgctaagaaggaggtgggagagttgtaatgagcg
tctggcgctctcttctccccttctagccctctgctcctgcacttgggctt
tgggataaagtcatccatctgcccctctttgtgaccagagcgagtgagtg
gctttttaatggaaagacgacttcaagcatctctgtatccagacgcggct
gcaaaaagcagggcaaagcaacagacaaaaggacagaggtgtatacaaac
ggttgggaaactggaccgttcctttgttcctttctgggaagtttacagca
agcagagccctgagcggagactaaccaatgatgagcatgatatggccacg
gccggaaacgccaggagcgcatctatgtgagttttgagacggggtttctt
gcactccaggtctagccttggatttgctattgcagctaaggctgaccttc
tgtttctgatcctcctgcttgctaatgccaactgctgtgaccttcaggtg
ctttcactgtgcccctagaatcagcttttaagaggtgatgagtcacactt
ggaagtttcacctagagccctggtcctctccggtagatgaaacctggaat
cagatcctttcccaggacgcgaattcttggtggggagccagtagatcatt
tatctctgaaatacgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_93590496_93591289
seq2: B6Ng01-227A24.b_45_839 (reverse)

seq1  GCCTACCCTCCCCACTCTCTCCATTCCTTCCTTCTC-TTTGCTCGTTACC  49
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GCCTACCCTCCCCACTCTCTCCATTCCTTCCTTCTCTTTTGCTCGTTACC  50

seq1  TTTGCTCTTTCTCCTTTTCCTTTCCTTCTCTACCTCATCTTTTCCTCCCT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTCTTTCTCCTTTTCCTTTCCTTCTCTACCTCATCTTTTCCTCCCT  100

seq1  TCTCATCCCATGGTCCTCCTTGCTTGCTTGCTCCCTATAATCTCCCCCAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCCCATGGTCCTCCTTGCTTGCTTGCTCCCTATAATCTCCCCCAT  150

seq1  TCTTACTCTAAGCCTAAATCTTAGGCAGTAGTGACTTTGAGTTTGGATCG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACTCTAAGCCTAAATCTTAGGCAGTAGTGACTTTGAGTTTGGATCG  200

seq1  CAGAAGGAAAGGACCGTAGAAGGAGCAAGGCCTTCTATTTCCTATAACCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGAAAGGACCGTAGAAGGAGCAAGGCCTTCTATTTCCTATAACCT  250

seq1  GGAGCTGCATCAGAAATAGCAGAGTAGTCCTCTCATCCTCATCTGGATTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGCATCAGAAATAGCAGAGTAGTCCTCTCATCCTCATCTGGATTG  300

seq1  GGCTGGTTTGTCAGGTCAGTCTGTGCTAGTCATGAGCACTCCTTTATGAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGTTTGTCAGGTCAGTCTGTGCTAGTCATGAGCACTCCTTTATGAT  350

seq1  TAAAAAAATGTTGGGCCAACAGATAAGGATAGACATATAATTTCTGAATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAATGTTGGGCCAACAGATAAGGATAGACATATAATTTCTGAATT  400

seq1  GGAAACACACCAAATGACTGCAAAAAGCCCGCCCCATGTAACCTCAACAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACACACCAAATGACTGCAAAAAGCCCGCCCCATGTAACCTCAACAA  450

seq1  AACAAATACAAAGACTGACACATCTAAAATGCAAGCCTTTACTTTTCACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATACAAAGACTGACACATCTAAAATGCAAGCCTTTACTTTTCACA  500

seq1  ACTTTATGGAGTGACTGGGAGATTCTTTTGTCCCTAGTGGCATGGCTGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATGGAGTGACTGGGAGATTCTTTTGTCCCTAGTGGCATGGCTGAA  550

seq1  CTTTGAGGCGTTAGTCTGGTTAGCCTACTCCGGTCTTATAAGGTTGCCTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGGCGTTAGTCTGGTTAGCCTACTCCGGTCTTATAAGGTTGCCTG  600

seq1  GTGGCTGGTTGGCTATCTGGTTGGCGAGCCTCTGCTGAGCAACATAGCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTGGTTGGCTATCTGGTTGGCGAGCCTCTGCTGAGCAACATAGCTT  650

seq1  TGCTCTTCCTGGCTTCTCATCTTTAGTGGTTTAGGCTGGTATTCTCATGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTCCTGGCTTCTCATCTTTAGTGGTTTAGGCTGGTATTCTCATGA  700

seq1  ACCCTAGTGACCGAAAAATAGAAAGAGATGGGGTTACACCTGAACTTAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAGTGACCGAAAAATAGAAAGAGATGGGGTTACACCTGAACTTAAA  750

seq1  AGGTGTCACGTGACCAAAGCAACTCAGAAGAACCGTCTAGAATTC  794
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTCACGTGACCAAAGCAACTCAGAAGAACCGTCTAGAATTC  795

seq1: chr15_93442318_93443079
seq2: B6Ng01-227A24.g_71_837

seq1  GAATTCTCTCCTTGGGTTTGGAAGTGTGGATTCTGTATCTCTTTAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCTTGGGTTTGGAAGTGTGGATTCTGTATCTCTTTAAAAAA  50

seq1  CGTAATATTTGATCTTGGGGACCCTGGGCAGCCGTTTTATACTCATGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAATATTTGATCTTGGGGACCCTGGGCAGCCGTTTTATACTCATGAAC  100

seq1  GGAGAGAGCGGCACCGCGCTAAGAAGGAGGTGGGAGAGTTGTAATGAGCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAGCGGCACCGCGCTAAGAAGGAGGTGGGAGAGTTGTAATGAGCG  150

seq1  TCTGGCGCTCTCTTCTCCCCTTCTAGCCCTCTGCTCCTGCACTTGGGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCGCTCTCTTCTCCCCTTCTAGCCCTCTGCTCCTGCACTTGGGCTT  200

seq1  TGGGATAAAGTCATCCATCTGCCCCTCTTTGTGACCAGAGCGAGTGAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATAAAGTCATCCATCTGCCCCTCTTTGTGACCAGAGCGAGTGAGTG  250

seq1  GCTTTTTAATGGAAAGACGACTTCAAGCATCTCTGTATCCAGACGCGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTAATGGAAAGACGACTTCAAGCATCTCTGTATCCAGACGCGGCT  300

seq1  GCAAAAAGCAGGGCAAAGCAACAGACAAAAGGACAGAGGTGTATACAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAAGCAGGGCAAAGCAACAGACAAAAGGACAGAGGTGTATACAAAC  350

seq1  GGTTGGGAAACTGGACCGTTCCTTTGTTCCTTTCTGGGAAGTTTACAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGGAAACTGGACCGTTCCTTTGTTCCTTTCTGGGAAGTTTACAGCA  400

seq1  AGCAGAGCCCTGAGCGGAGACTAACCAATGATGAGCATGATATGGCCACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGCCCTGAGCGGAGACTAACCAATGATGAGCATGATATGGCCACG  450

seq1  GCCGGAAACGCCAGGAGCGCATCTATGTGAGTTTTGAGACGGGGTTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGAAACGCCAGGAGCGCATCTATGTGAGTTTTGAGACGGGGTTTCTT  500

seq1  GCACTCCAGGTCTAGCCTTGGATTTGCTATTGCAGCTAAGGCTGACCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCCAGGTCTAGCCTTGGATTTGCTATTGCAGCTAAGGCTGACCTTC  550

seq1  TGTTTCTGATCCTCCTGCTTGCTAATGCCAACTGCTGTGACC-TCAGGTG  599
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGTTTCTGATCCTCCTGCTTGCTAATGCCAACTGCTGTGACCTTCAGGTG  600

seq1  CTTTCACTGTG-CCCTAGAATCAGCTTTTAAGAGGTGATGAGTCACACTT  648
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACTGTGCCCCTAGAATCAGCTTTTAAGAGGTGATGAGTCACACTT  650

seq1  GGAAGTTTCACCTAGAG-CCTGGTCCTCTCCGGCAGATGAAACCTGGAAT  697
      ||||||||||||||||| ||||||||||||||| ||||||||||||||||
seq2  GGAAGTTTCACCTAGAGCCCTGGTCCTCTCCGGTAGATGAAACCTGGAAT  700

seq1  CAGATCCTTTCCCAGGACGCGAACTCTTGGT-GGGAGCCAG-AGATCATT  745
      ||||||||||||||||||||||| ||||||| ||||||||| ||||||||
seq2  CAGATCCTTTCCCAGGACGCGAATTCTTGGTGGGGAGCCAGTAGATCATT  750

seq1  TATCTCTGAAATACGAC  762
      |||||||||||||||||
seq2  TATCTCTGAAATACGAC  767