BAC Information

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BAC

Clone NameB6Ng01-231K22
Chromosome15 (Build37)
Map Location 9,609,911 - 9,811,683
singlet/doubletdoublet
Overlap geneC230086A09Rik
Upstream geneSlc1a3, EG622770, LOC268781, LOC382969, LOC100039619, Ranbp3l, 1110020G09Rik, Skp2, Lmbrd2, LOC666503, Ugt3a1, LOC100039661, Ugt3a2, LOC383094, Capsl, Il7r
Downstream genePrlr, Agxt2, 4930461P20Rik, Bxdc2, Rad1, 4930401A09Rik, EG666579, Rai14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231K22.bB6Ng01-231K22.g
ACCGA044217GA044218
length1,0311,125
definitionB6Ng01-231K22.b B6Ng01-231K22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,811,041 - 9,811,683)(9,609,911 - 9,611,027)
sequence
gaattcttcatcataggtcatgtggagggtacatggtacgtgttgcattg
tacatgatacaaggcagcttcacctcttcacatcctcaaatctacagtat
gtgtccggcatgccttacaagtctgtcctttgaacttaatctaagttatt
tcattactttaatgtcatattaaataaataaacatccagagttattttta
tatctttaaaatattttattaattctatacagtaaatttttatcacattt
accccaatctgtctttaattctttccagatatttatcaacttccttaccc
ccttcagtgttgtataattttttcttttaatttaatgaccagcctacttc
tatttgtgctgtctgtatacttctggatatgagagcacctctgagcatat
atacctatcagaaatcactcgattaaaggaaaatggctatctcttcccca
caagttatcagttgtctatatcttcttaattatgagtggtgctcatgagc
ctcttctgtgttagttacttttctgttgctgtgaccaaaaacatgaagaa
agtttattttgactaatggttccccaggagacagtgtcttgcacagagag
gcagcatggcagcaagtagcagcacatagacagaggaggaatctgaaagc
ttacatcctcaacttcaagcatggatagaatcaacaagaagtagggaaca
gctatagatacccaaagtctgctcccagtaatgtgcgtcctccagcaagg
tctagctcccaaaggttctgccatacccctgaatagcgtcatcaaccaat
gtttgtctatggatgacttctcattcaaactactatatcttcccatacca
tgctgaaatattgactggcttgatagtgtgcagatgtagacaaccacagt
tgctgtgagctaataagtatagggttctgtcaagtccaagttatgctatt
tgggtcttatccttaccaagcttctatctttctatcctttctgatagtac
ctgagcctgggaggatgggtatgctgtagaa
gaattctcttacctctcagtttgcttaagtcctgtgtttcgccagaaggg
ctaccttaatttaatatcagaatacccctttctctacagaaaatactgct
tttactctacttttcaattttcctgaacctgattatctttttccatgttt
ttcaatttatctgttagtatttatggccaattgcctgcccatgtttataa
gaatgtggacttgatcagagcagagaagtccaccagttgggctgttgaca
tgtctacataatgcggcgtgtaggaaaagcacgtgcttccaaactgatcc
gagtatagatgaggggctttcaccaaaccgcaaatgtggctgcataaaca
aagctaacctttctgctaattcatatttcaaatgaatagaataaaagttc
taaccctctacttactgcttttctcaactcacttctctctaaataactca
tccagcacgcacattgttggttgcgagtccaacatgtctttatatttagt
gagttttaaaagctgaatgaataacttgtttgggatgatgatattcattg
taaaataaatcaattataataaaaagtaaacgaagcacacatgattaatt
ctgtcattacttccctctatatttaaccagtactgtttgtgaaagtatta
gattgctttagaaataatatcaagtgaattaaaaaatcatattatacctt
tctaaactagtaaaatggcatagtgatttctactgttttagacggaaata
tattaagaacataaacaatatgatggaaacttttgtaatcactctcttat
caagcataactgagaatcaaatagaagatcattgtttagtttgtaacatc
tgaatacatattgaaaaatacaaattaggacacattttaatatatgcgta
gacaaaattaggttataatacttactgataaaagctatcacttgatctga
actgttcaaattcattaatcttgaacactggtaacaggaaagtagtaagg
tcagagtcccagcactcaacactacatgtgaattgctagcgctgcatgtt
cagtggtggtggccctcttctagcctggggaataaggctatgaacacttc
agcccatggtctgaatacacttagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_9811041_9811683
seq2: B6Ng01-231K22.b_48_690 (reverse)

seq1  GATTCCTCCTCTGTCTATGTGCTGCTACTTGCTGCCATGCTGCCTCTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCTCCTCTGTCTATGTGCTGCTACTTGCTGCCATGCTGCCTCTCTG  50

seq1  TGCAAGACACTGTCTCCTGGGGAACCATTAGTCAAAATAAACTTTCTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGACACTGTCTCCTGGGGAACCATTAGTCAAAATAAACTTTCTTCA  100

seq1  TGTTTTTGGTCACAGCAACAGAAAAGTAACTAACACAGAAGAGGCTCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTGGTCACAGCAACAGAAAAGTAACTAACACAGAAGAGGCTCATG  150

seq1  AGCACCACTCATAATTAAGAAGATATAGACAACTGATAACTTGTGGGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCACTCATAATTAAGAAGATATAGACAACTGATAACTTGTGGGGAA  200

seq1  GAGATAGCCATTTTCCTTTAATCGAGTGATTTCTGATAGGTATATATGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAGCCATTTTCCTTTAATCGAGTGATTTCTGATAGGTATATATGCT  250

seq1  CAGAGGTGCTCTCATATCCAGAAGTATACAGACAGCACAAATAGAAGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGTGCTCTCATATCCAGAAGTATACAGACAGCACAAATAGAAGTAG  300

seq1  GCTGGTCATTAAATTAAAAGAAAAAATTATACAACACTGAAGGGGGTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTCATTAAATTAAAAGAAAAAATTATACAACACTGAAGGGGGTAAG  350

seq1  GAAGTTGATAAATATCTGGAAAGAATTAAAGACAGATTGGGGTAAATGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTGATAAATATCTGGAAAGAATTAAAGACAGATTGGGGTAAATGTG  400

seq1  ATAAAAATTTACTGTATAGAATTAATAAAATATTTTAAAGATATAAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATTTACTGTATAGAATTAATAAAATATTTTAAAGATATAAAAAT  450

seq1  AACTCTGGATGTTTATTTATTTAATATGACATTAAAGTAATGAAATAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGGATGTTTATTTATTTAATATGACATTAAAGTAATGAAATAACT  500

seq1  TAGATTAAGTTCAAAGGACAGACTTGTAAGGCATGCCGGACACATACTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTAAGTTCAAAGGACAGACTTGTAAGGCATGCCGGACACATACTGT  550

seq1  AGATTTGAGGATGTGAAGAGGTGAAGCTGCCTTGTATCATGTACAATGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGAGGATGTGAAGAGGTGAAGCTGCCTTGTATCATGTACAATGCA  600

seq1  ACACGTACCATGTACCCTCCACATGACCTATGATGAAGAATTC  643
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGTACCATGTACCCTCCACATGACCTATGATGAAGAATTC  643

seq1: chr15_9609911_9611027
seq2: B6Ng01-231K22.g_68_1192

seq1  GAATTCTCTTACCTCTCAGTTTGCTTAAGTCCTGTGTTTCGCCAGAAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTACCTCTCAGTTTGCTTAAGTCCTGTGTTTCGCCAGAAGGG  50

seq1  CTACCTTAATTTAATATCAGAATACCCCTTTCTCTACAGAAAATACTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTTAATTTAATATCAGAATACCCCTTTCTCTACAGAAAATACTGCT  100

seq1  TTTACTCTACTTTTCAATTTTCCTGAACCTGATTATCTTTTTCCATGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTCTACTTTTCAATTTTCCTGAACCTGATTATCTTTTTCCATGTTT  150

seq1  TTCAATTTATCTGTTAGTATTTATGGCCAATTGCCTGCCCATGTTTATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTTATCTGTTAGTATTTATGGCCAATTGCCTGCCCATGTTTATAA  200

seq1  GAATGTGGACTTGATCAGAGCAGAGAAGTCCACCAGTTGGGCTGTTGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGGACTTGATCAGAGCAGAGAAGTCCACCAGTTGGGCTGTTGACA  250

seq1  TGTCTACATAATGCGGCGTGTAGGAAAAGCACGTGCTTCCAAACTGATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTACATAATGCGGCGTGTAGGAAAAGCACGTGCTTCCAAACTGATCC  300

seq1  GAGTATAGATGAGGGGCTTTCACCAAACCGCAAATGTGGCTGCATAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATAGATGAGGGGCTTTCACCAAACCGCAAATGTGGCTGCATAAACA  350

seq1  AAGCTAACCTTTCTGCTAATTCATATTTCAAATGAATAGAATAAAAGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAACCTTTCTGCTAATTCATATTTCAAATGAATAGAATAAAAGTTC  400

seq1  TAACCCTCTACTTACTGCTTTTCTCAACTCACTTCTCTCTAAATAACTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCTCTACTTACTGCTTTTCTCAACTCACTTCTCTCTAAATAACTCA  450

seq1  TCCAGCACGCACATTGTTGGTTGCGAGTCCAACATGTCTTTATATTTAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCACGCACATTGTTGGTTGCGAGTCCAACATGTCTTTATATTTAGT  500

seq1  GAGTTTTAAAAGCTGAATGAATAACTTGTTTGGGATGATGATATTCATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTAAAAGCTGAATGAATAACTTGTTTGGGATGATGATATTCATTG  550

seq1  TAAAATAAATCAATTATAATAAAAAGTAAACGAAGCACACATGATTAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAATCAATTATAATAAAAAGTAAACGAAGCACACATGATTAATT  600

seq1  CTGTCATTACTTCCCTCTATATTTAACCAGTACTGTTTGTGAAAGTATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCATTACTTCCCTCTATATTTAACCAGTACTGTTTGTGAAAGTATTA  650

seq1  GATTGCTTTAGAAATAATATCAAGTGAATTAAAAAATCATATTATACCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCTTTAGAAATAATATCAAGTGAATTAAAAAATCATATTATACCTT  700

seq1  TCTAAACTAGTAAAATGGCATAGTGATTTCTACTGTTTTAGACGGAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACTAGTAAAATGGCATAGTGATTTCTACTGTTTTAGACGGAAATA  750

seq1  TATTAAGAACATAAACAATATGATGGAAACTTTTGTAATCACTCTCTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAGAACATAAACAATATGATGGAAACTTTTGTAATCACTCTCTTAT  800

seq1  CAAGCATAACTGAGAATCAAATAGAAGATCATTGTTTAGTTTGTAACATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATAACTGAGAATCAAATAGAAGATCATTGTTTAGTTTGTAACATC  850

seq1  TGAATACATATTGAAAAAATACAAATTAGGACACATTTTAATATATGCGT  900
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGAATACATATTG-AAAAATACAAATTAGGACACATTTTAATATATGCGT  899

seq1  AGACAAAATTAGGTTATAATACTTACTGATAAAAAGCTATCACTTGATCT  950
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGACAAAATTAGGTTATAATACTTACTGAT-AAAAGCTATCACTTGATCT  948

seq1  GAACTGTTCAAATTCATTAATCTTGACACCTGGTAACAGGAAAGTAGTAA  1000
      ||||||||||||||||||||||||||   |||||||||||||||||||||
seq2  GAACTGTTCAAATTCATTAATCTTGAACACTGGTAACAGGAAAGTAGTAA  998

seq1  GGTCAGAGTCCCAGCACTCACAACTACATGTGAATTGCTAGCGCTGCATG  1050
      ||||||||||||||||||||  ||||||||||||||||||||||||||||
seq2  GGTCAGAGTCCCAGCACTCAACACTACATGTGAATTGCTAGCGCTGCATG  1048

seq1  -TCAGTG--TGTGGCCCTC-TCTAG-CTGGGGAATAAGGGTATG-ACAC-  1093
       ||||||   ||||||||| ||||| ||||||||||||| |||| |||| 
seq2  TTCAGTGGTGGTGGCCCTCTTCTAGCCTGGGGAATAAGGCTATGAACACT  1098

seq1  TCAG-CCAT-GTCTG-ATACACTTAGC  1117
      |||| |||| ||||| |||||||||||
seq2  TCAGCCCATGGTCTGAATACACTTAGC  1125