MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-231M08
Chromosome	15 (Build37)
Map Location	10,056,975 - 10,057,929
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Skp2, Lmbrd2, LOC666503, Ugt3a1, LOC100039661, Ugt3a2, LOC383094, Capsl, Il7r, C230086A09Rik
Downstream gene	Prlr, Agxt2, 4930461P20Rik, Bxdc2, Rad1, 4930401A09Rik, EG666579, Rai14, C1qtnf3, Amacr, Slc45a2, Rxfp3, Adamts12
Link	Open Mouse BAC browser

Click to get alignment info.

name	Skp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27401 MGI:1351663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Lmbrd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320506 MGI:2444173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666503 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666503
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ugt3a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105887 MGI:2146055
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039661 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039661
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 33 ESTs, 2 Proteins pseudo : _no_value

name	Ugt3a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:223337 MGI:2145969
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383094 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383094
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	Capsl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75568 MGI:1922818
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il7r (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16197 MGI:96562
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C230086A09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320277 MGI:2443727
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prlr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19116 MGI:97763
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Agxt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268782 MGI:2146052
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930461P20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78244 MGI:1925371
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 71 ESTs, 6 Proteins

name	Bxdc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67832 MGI:1915082
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rad1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19355 MGI:1316678
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930401A09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75777 MGI:1923027
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins

name	EG666579 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666579 MGI:3648322
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 4 Proteins pseudo : _no_value

name	Rai14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75646 MGI:1922896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C1qtnf3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:81799 MGI:1932136
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Amacr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17117 MGI:1098273
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc45a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22293 MGI:2153040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rxfp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239336 MGI:2441827
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adamts12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239337 MGI:2146046
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Skp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70909358 GeneID:27401 MGI:1351663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : S-phase kinase-associated protein 2 (p45) transcript_id : NM_013787.2

name	Skp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70909362 GeneID:27401 MGI:1351663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : S-phase kinase-associated protein 2 (p45) transcript_id : NM_145468.1

name	Lmbrd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31581567 GeneID:320506 MGI:2444173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LMBR1 domain containing 2 transcript_id : NM_177178.3

name	Ugt3a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46402180 GeneID:105887 MGI:2146055
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP glycosyltransferases 3 family, polypeptide A1 transcript_id : NM_207216.1

name	Ugt3a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365155 GeneID:223337 MGI:2145969
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP glycosyltransferases 3 family, polypeptide A2 transcript_id : NM_144845.3

name	Capsl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21312981 GeneID:75568 MGI:1922818
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcyphosine-like transcript_id : NM_029341.1

name	Il7r (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45269151 GeneID:16197 MGI:96562
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 7 receptor transcript_id : NM_008372.3

name	C230086A09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125991757 GeneID:320277 MGI:2443727
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C230086A09 gene transcript_id : NM_177123.3

name	Prlr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142379167 GeneID:19116 MGI:97763
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prolactin receptor transcript_id : NM_011169.4

name	Agxt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:73661177 GeneID:268782 MGI:2146052
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : alanine-glyoxylate aminotransferase 2 transcript_id : NM_001031851.1

name	4930461P20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149266407 GeneID:78244 MGI:1925371
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 71 ESTs, 5 Proteins product : RIKEN cDNA 4930461P20 gene transcript_id : XM_001473643.1

name	Bxdc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802629 GeneID:67832 MGI:1915082
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : brix domain containing 2 transcript_id : NM_026396.3

name	Rad1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84872188 GeneID:19355 MGI:1316678
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAD1 homolog (S. pombe) transcript_id : NM_011232.2

name	4930401A09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149266409 GeneID:75777 MGI:1923027
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins product : RIKEN cDNA 4930401A09 gene, transcript variant 2 transcript_id : XM_897217.3

name	Rai14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981406 GeneID:75646 MGI:1922896
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinoic acid induced 14 transcript_id : NM_030690.2

name	C1qtnf3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366188 GeneID:81799 MGI:1932136
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : C1q and tumor necrosis factor related protein 3 transcript_id : NM_030888.3

name	Amacr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381661 GeneID:17117 MGI:1098273
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : alpha-methylacyl-CoA racemase transcript_id : NM_008537.4

name	Slc45a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803377 GeneID:22293 MGI:2153040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 45, member 2 transcript_id : NM_053077.3

name	Rxfp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386187 GeneID:239336 MGI:2441827
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : relaxin family peptide receptor 3 transcript_id : NM_178717.3

name	Adamts12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:29789428 GeneID:239337 MGI:2146046
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12 transcript_id : NM_175501.1

name	Skp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7949135 GeneID:27401 MGI:1351663
definition	GO_component : GO:0000151 - ubiquitin ligase complex [Evidence TAS] GO_function : GO:0016301 - kinase activity [Evidence IEA] GO_process : GO:0000082 - G1/S transition of mitotic cell cycle [Evidence IDA]; GO:0008634 - negative regulation of survival gene product activity [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IPI]; GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IDA] codon_start : 1 note : isoform a is encoded by transcript variant 1; p45 product : S-phase kinase-associated protein 2 isoform a protein_id : NP_038815.1

name	Skp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70909363 GeneID:27401 MGI:1351663
definition	GO_component : GO:0000151 - ubiquitin ligase complex [Evidence TAS] GO_function : GO:0016301 - kinase activity [Evidence IEA] GO_process : GO:0000082 - G1/S transition of mitotic cell cycle [Evidence IDA]; GO:0008634 - negative regulation of survival gene product activity [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IPI]; GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IDA] codon_start : 1 note : isoform b is encoded by transcript variant 2; p45 product : S-phase kinase-associated protein 2 isoform b protein_id : NP_663443.1

name	Lmbrd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559855 GeneID:320506 MGI:2444173
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : LMBR1 domain containing 2 protein_id : NP_796152.2

name	Ugt3a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402181 CCDS:CCDS27374.1 GeneID:105887 MGI:2146055
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]; GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : UDP glucuronosyltransferase 3 family, polypeptide A1 product : UDP glycosyltransferases 3 family, polypeptide A1 protein_id : NP_997099.1

name	Ugt3a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450243 CCDS:CCDS27375.1 GeneID:223337 MGI:2145969
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]; GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : UDP glucuronosyltransferase 3 family, polypeptide A2 product : UDP glycosyltransferases 3 family, polypeptide A2 protein_id : NP_659094.1

name	Capsl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110835711 GeneID:75568 MGI:1922818
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 note : Calcyphosine product : calcyphosine-like protein_id : NP_083617.2

name	Il7r (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45269152 CCDS:CCDS27376.1 GeneID:16197 MGI:96562
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004896 - hematopoietin/interferon-class (D200-domain) cytokine receptor activity [Evidence IEA]; GO:0004907 - interleukin receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence IEA]; GO:0048535 - lymph node development [Evidence IMP] codon_start : 1 note : IL-7 receptor alpha chain product : interleukin 7 receptor precursor protein_id : NP_032398.3

name	C230086A09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125991758 GeneID:320277 MGI:2443727
definition	GO_function : GO:0008289 - lipid binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : KPL2 protein protein_id : NP_796097.2

name	Prlr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328491 CCDS:CCDS27377.1 GeneID:19116 MGI:97763
definition	GO_component : GO:0009986 - cell surface [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004896 - hematopoietin/interferon-class (D200-domain) cytokine receptor activity [Evidence IEA]; GO:0042978 - ornithine decarboxylase activator activity [Evidence ISS]; GO:0004925 - prolactin receptor activity [Evidence ISS] [Evidence IMP]; GO:0042803 - protein homodimerization activity [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence ISS]; GO:0007166 - cell surface receptor linked signal transduction [Evidence ISS]; GO:0007595 - lactation [Evidence IMP] [Evidence ISS]; GO:0030155 - regulation of cell adhesion [Evidence IMP]; GO:0030856 - regulation of epithelial cell differentiation [Evidence IMP]; GO:0006694 - steroid biosynthesis [Evidence ISS]; GO:0042110 - T cell activation [Evidence ISS]; GO:0007171 - transmembrane receptor protein tyrosine kinase activation (dimerization) [Evidence ISS]; GO:0042977 - tyrosine phosphorylation of JAK2 protein [Evidence ISS] codon_start : 1 exception : mismatches in translation note : prolactin receptor related sequence 1 product : prolactin receptor protein_id : NP_035299.3

name	Agxt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:73661178 CCDS:CCDS27378.1 GeneID:268782 MGI:2146052
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0008453 - alanine-glyoxylate transaminase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : alanine-glyoxylate aminotransferase 2 protein_id : NP_001027021.1

name	4930461P20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149266408 GeneID:78244 MGI:1925371
definition	codon_start : 1 product : hypothetical protein LOC78244 protein_id : XP_001473693.1

name	Bxdc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:141802630 GeneID:67832 MGI:1915082
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0007046 - ribosome biogenesis [Evidence IEA] codon_start : 1 product : BRIX protein_id : NP_080672.3

name	Rad1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84872189 CCDS:CCDS27379.1 GeneID:19355 MGI:1316678
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0008408 - 3'-5' exonuclease activity [Evidence ISS]; GO:0003684 - damaged DNA binding [Evidence IEA] [Evidence ISS]; GO:0008853 - exodeoxyribonuclease III activity [Evidence IEA]; GO:0004527 - exonuclease activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA] GO_process : GO:0000075 - cell cycle checkpoint [Evidence ISS]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 product : RAD1 homolog protein_id : NP_035362.2

name	4930401A09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149266410 GeneID:75777 MGI:1923027
definition	codon_start : 1 product : hypothetical protein LOC75777 isoform 2 protein_id : XP_902310.3

name	Rai14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13507620 GeneID:75646 MGI:1922896
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 note : NORPEG-like protein product : ankycorbin protein_id : NP_109615.1

name	C1qtnf3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13562098 CCDS:CCDS27380.1 GeneID:81799 MGI:1932136
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005576 - extracellular region [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 note : collagenous repeat-containing sequence product : collagenous repeat-containing protein_id : NP_112150.1

name	Amacr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46518506 CCDS:CCDS27381.1 GeneID:17117 MGI:1098273
definition	EC_number : 5.1.99.4 GO_component : GO:0005739 - mitochondrion [Evidence IDA]; GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0008111 - alpha-methylacyl-CoA racemase activity [Evidence TAS]; GO:0016853 - isomerase activity [Evidence IEA] GO_process : GO:0008300 - isoprenoid catabolism [Evidence TAS]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : alpha-methylacyl-Coenzyme A racemase; 2-arylpropionyl-CoA epimerase product : alpha-methylacyl-CoA racemase protein_id : NP_032563.2

name	Slc45a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716355 CCDS:CCDS27382.1 GeneID:22293 MGI:2153040
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006583 - melanin biosynthesis from tyrosine [Evidence IEA]; GO:0048066 - pigmentation during development [Evidence IMP]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007601 - visual perception [Evidence IEA] codon_start : 1 note : B/AIM-1-like protein; dominant brown; underwhite product : membrane associated transporter protein protein_id : NP_444307.1

name	Rxfp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520143 CCDS:CCDS27383.1 GeneID:239336 MGI:2441827
definition	GO_component : GO:0016021 - integral to membrane [Evidence IC] GO_function : GO:0004982 - N-formyl peptide receptor activity [Evidence IEA]; GO:0008528 - peptide receptor activity, G-protein coupled [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0051482 - elevation of cytosolic calcium ion concentration during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating) [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : G-protein coupled receptor SALPR; somatostatin and angiotensin-like peptide receptor; relaxin-3/INSL7 receptor 1 product : relaxin 3 receptor 1 protein_id : NP_848832.1

name	Adamts12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789429 CCDS:CCDS27384.1 GeneID:239337 MGI:2146046
definition	GO_component : GO:0031012 - extracellular matrix [Evidence IEA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : a disintegrin-like and metalloprotease with thrombospondin type 1 motif, 12; metalloprotease disintegrin 12 product : a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 12 protein_id : NP_780710.1

name	LOC666503 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666503
definition	number : 5 pseudo : _no_value

name	LOC666503 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666503
definition	number : 4 pseudo : _no_value

name	LOC666503 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666503
definition	number : 3 pseudo : _no_value

name	LOC666503 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666503
definition	number : 2 pseudo : _no_value

name	LOC666503 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666503
definition	number : 1 pseudo : _no_value

name	LOC383094 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383094
definition	number : 1 pseudo : _no_value

name	LOC383094 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383094
definition	number : 2 pseudo : _no_value

name	LOC383094 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383094
definition	number : 3 pseudo : _no_value

name	LOC383094 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383094
definition	number : 4 pseudo : _no_value

name	LOC383094 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383094
definition	number : 5 pseudo : _no_value

name	LOC383094 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383094
definition	number : 6 pseudo : _no_value

name	LOC100039661 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149266403 GeneID:100039661
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 33 ESTs, 2 Proteins product : similar to UDP glycosyltransferases 3 family, polypeptide A1 pseudo : _no_value transcript_id : XR_031131.1

name	EG666579 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149266411 GeneID:666579 MGI:3648322
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 4 Proteins product : predicted gene, EG666579 pseudo : _no_value transcript_id : XR_001896.2

clone name	MSMg01-385K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503F16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-212G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148E14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-370A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060M23
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-231M08.b	B6Ng01-231M08.g
ACC	GA044277	GA044278
length	952	1,055
definition	B6Ng01-231M08.b	B6Ng01-231M08.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcacttgtctctgggttccttcaattatataagaggaagacattca aatccctgtggatgtctctgtaataggaaacattttgtgattaattaatt agtgtacacaaaatgctaacgcctttacttgctcttgcacctttgaagca aaggagtaaacaagcattttcctttgtctttccaagttcccattcctacc tggttagtgactattaaaggtaagagaaaatcccagtcaaatgtaatctg agatggaactatgaatgcacttgagagcacagtcctgagtggagtctcta gttgccagttcttgggagcagaattccttcagatgacaaactcttatgca tataaggaaaattgaaaaggagttttattttatgtgagtcaatatatttt aaagatttgaaacatttttttaaagaagaatctcactaggaaagaaagga attatttgctctttcatctttcaaaaccttaaataggagaattaatacag taaacccgatttatctagtcaaccttgtcactgatatccaaatgggattt tagttcttgtcatgaccaaactaacatttttctacatatggaagtacaag gatccatttcttgtgtggtttgaactcccagaagccatggattactgttc ccctcccccttccctgtacccttgccagcatatgctgtcacttgcttcat cgatcttgaccaatgttattaggttaaggtgaaatctcacagtagtttta atttgtgtttccctggtggctaaggatgttggacatttctttagctgttt ctcagtcatttgtgttttgtcttttagaattctcatttcagttatatatc tcaatttttttaattgggttgttttcttagtgttaagggattttaaaaat ttctcttttttttctttattttttaaaatgtatatgtgtgtgtgtatata ga	gaattcatcttattccagtcaagatgggcaagataaataaaacaaacggc agcagatgctggcaaggatgtggagaaagaagaacacttattcattgtgg aaggagtgcaaatttatatagccaccatggaagtcagtacggaagttcct tcaaaagccaaaaattgatctatctcaagatccatctataaaactcttgt tcatatacaaaagggccccctgctcatagctgttctattcataatggcca gaaattggaaaaggccttgaagtctaccgtctggtaaattggataatgta aatgaggtacatttatacaataaaattttatctggctttcaagaaaaatg aaattattaaatctgcaggcaaatggatggccctagaaacaatcacccag agtgatggaactgagactcagaaagacaaatattgaatgttttccctcat atgccagtgttagcttttagatatatgtgtttcaatatcagaataaccaa ggttaaacagaaagtagagagctaggatgaaggaggaggtgatcttctag ggaccatgaatgggaaataactatattgttaccacacaataaaagggaaa ttagaataggaggattaaatggagagggtgataggtggacagagtagaga agggaccatgggaagggacaacttaccctaaaggtctttttgaaaagcca tacagaagcctattcctgtagatgcttcctaaaatatatgcgtatataaa tggaatttaaatggagttatcataggatgggggagacaatgtctcaactg gacatccatatgttaccataaaaacctatacctgggagtggttatatctt ttttgagtcattggcaaaaacagttccacagaccaccctttaaatattac aaagtatggccaatgatattgaagtacctaccactaatatgatgcctaag agattattacttgaagacaccacacacttatgggtatggaacatggagaa accaacctggtacttcactagaagtttggaccttataactacctaggcat catcc
quality values	Open. Hide. 49 41 18 24 62 31 24 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 43 59 59 51 43 43 28 32 28 28 28 49 48 54 62 56 54 54 59 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 50 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 54 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 47 47 62 62 62 62 62 62 47 45 62 62 62 49 39 62 62 62 62 62 62 62 62 62 62 62 62 54 54 43 62 62 62 62 62 62 47 39 58 58 58 58 58 58 58 54 58 47 58 58 58 58 58 58 58 54 58 54 54 54 58 58 58 45 54 58 58 52 58 58 58 58 58 58 58 54 58 52 58 42 35 58 58 58 58 58 58 58 54 58 54 52 39 58 58 50 58 58 51 54 51 58 46 41 51 54 51 51 58 44 45 58 58 58 58 51 40 58 58 58 58 52 51 50 58 58 49 58 51 52 50 58 58 52 49 51 39 49 52 52 52 33 47 52 53 54 58 54 58 50 53 50 45 58 58 58 51 51 41 53 42 42 54 44 32 50 52 53 51 54 41 39 33 32 38 35 54 37 52 33 53 54 38 33 34 34 49 44 42 17 51 41 42 47 54 45 52 40 53 37 33 53 45 29 33 44 42 54 54 54 54 53 40 45 54 54 54 45 52 53 53 53 35 53 36 29 34 52 32 41 33 29 41 40 47 6 46 33 29 42 32 45 32 33 41 33 31 42 47 21 32 36 51 43 31 31 51 37 37 21 51 51 35 31 35 31 18 23 31 26 24 46 43 42 32 42 31 46 46 41 42 31 31 31 46 46 28 46 10 23 30 21 33 36 41 36 38 24 37 23 31 30 38 37 38 31 31 31 30 30 37 37 41 28 22 33 31 48 48 48 48 44 20 17 35 18 22 44 48 36 25 24 39 21 43 43 31 37 21 33 29 18 31 38 17 14 27 26 19 47 12 33 19 43 39 22 4 22 43 31 24 22 43 33 37 34 33 31 43 43 47 47 43 43 30 26 24 37 29 19 25 39 39 39 37 15 30 37 37 19 17 18 7 18 14 9 10 14 17 15 8 13 15 8 6 9 13 11 8 7 9 12 8 4	Open. Hide. 62 35 37 44 62 47 47 62 56 27 20 24 27 28 28 21 19 25 28 35 51 46 56 59 59 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 39 59 48 43 56 56 54 62 59 62 62 54 54 54 59 62 62 62 62 59 59 59 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 59 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 59 62 62 62 62 62 62 62 62 59 59 62 62 62 59 49 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 56 62 62 62 62 62 62 56 62 56 62 62 62 62 62 62 62 49 47 62 62 62 62 62 62 43 62 62 47 54 62 62 62 62 62 62 62 62 51 51 37 46 56 51 51 47 47 62 62 62 56 56 62 62 62 62 62 47 47 62 62 62 62 62 62 62 62 62 54 47 54 62 54 41 22 54 46 62 56 62 62 56 62 62 62 62 62 62 62 62 42 41 62 47 42 62 43 62 62 41 62 62 42 62 38 26 54 42 62 52 62 62 62 62 52 62 43 58 58 52 58 51 50 54 52 45 42 58 58 41 29 17 14 20 6 17 29 42 58 42 54 54 35 58 52 48 29 29 25 47 47 54 52 52 58 52 49 47 35 34 20 47 46 25 26 22 36 44 52 42 29 52 52 38 34 25 35 22 58 58 54 32 41 30 50 50 50 39 41 28 19 50 42 34 33 24 51 51 24 45 58 34 41 51 30 50 47 43 49 38 46 32 49 31 41 47 52 53 29 49 49 52 51 51 50 46 39 39 53 46 50 50 36 52 52 51 50 29 17 38 50 35 58 23 44 50 12 58 39 18 58 18 22 58 33 52 18 29 41 32 39 41 26 52 29 10 20 28 25 53 54 54 49 54 39 19 22 15 18 32 38 52 32 25 33 35 27 25 35 34 54 15 16 11 11 25 9 24 24 52 42 32 51 40 44 28 18 27 32 40 18 52 37 41 18 14 15 16 19 32 33 27 24 35 41 47 46 31 16 37 28 20 32 24 28 29 32 31 32 16 40 41 41 40 23 28 15 6 9 22 16 18 31 26 27 16 16 40 37 18 14 14 5 6 14 37 26 29 8 26 21 18 31 24 19 18 30 26 46 23 45 33 36 42 21 31 15 11 17 23 30 13 46 30 13 13 11 12 9 12 17 7 22 27 34 33 32 23 30 31 23 11 12 18 20 12 13 26 26 17 30 22 22 9 11 7 15 13 30 29 26 32 9 10 11 7 7 22 23 11 5 6 6 8 17 31 24 37 15 24 27 28 9 9 25 11 5 7 6 6 24 26 8 16 6 7 5 17 31 25 13 18 16 32 9 5 5 15 11 9 9 6 8 5 6 12 16 22 5 10 44 21 21 33 18 11 17 17 33 32 18 14 18 19 9 13 7 11 6 7 15 8 10 26 7 10 20 16 8 7 13 11 21 5 6 5 19 7 12 6 7 16 9 7 7 4 6 21 23 15 6 5 5 19 13 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr15_10056975_10057929
seq2: B6Ng01-231M08.b_47_998

seq1  GAATTCACTTGTCTCTGGGTTCCTTCAATTATATAAGAGGAAGACATTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGTCTCTGGGTTCCTTCAATTATATAAGAGGAAGACATTCA  50

seq1  AATCCCTGTGGATGTCTCTGTAATAGGAAACATTTTGTGATTAATTAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCTGTGGATGTCTCTGTAATAGGAAACATTTTGTGATTAATTAATT  100

seq1  AGTGTACACAAAATGCTAACGCCTTTACTTGCTCTTGCACCTTTGAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTACACAAAATGCTAACGCCTTTACTTGCTCTTGCACCTTTGAAGCA  150

seq1  AAGGAGTAAACAAGCATTTTCCTTTGTCTTTCCAAGTTCCCATTCCTACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGTAAACAAGCATTTTCCTTTGTCTTTCCAAGTTCCCATTCCTACC  200

seq1  TGGTTAGTGACTATTAAAGGTAAGAGAAAATCCCAGTCAAATGTAATCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAGTGACTATTAAAGGTAAGAGAAAATCCCAGTCAAATGTAATCTG  250

seq1  AGATGGAACTATGAATGCACTTGAGAGCACAGTCCTGAGTGGAGTCTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGAACTATGAATGCACTTGAGAGCACAGTCCTGAGTGGAGTCTCTA  300

seq1  GTTGCCAGTTCTTGGGAGCAGAATTCCTTCAGATGACAAACTCTTATGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCAGTTCTTGGGAGCAGAATTCCTTCAGATGACAAACTCTTATGCA  350

seq1  TATAAGGAAAATTGAAAAGGAGTTTTATTTTATGTGAGTCAATATATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGGAAAATTGAAAAGGAGTTTTATTTTATGTGAGTCAATATATTTT  400

seq1  AAAGATTTGAAACATTTTTTTAAAGAAGAATCTCACTAGGAAAGAAAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTTGAAACATTTTTTTAAAGAAGAATCTCACTAGGAAAGAAAGGA  450

seq1  ATTATTTGCTCTTTCATCTTTCAAAACCTTAAATAGGAGAATTAATACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTGCTCTTTCATCTTTCAAAACCTTAAATAGGAGAATTAATACAG  500

seq1  TAAACCCGATTTATCTAGTCAACCTTGTCACTGATATCCAAATGGGATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCCGATTTATCTAGTCAACCTTGTCACTGATATCCAAATGGGATTT  550

seq1  TAGTTCTTGTCATGACCAAACTAACATTTTTCTACATATGGAAGTACAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTTGTCATGACCAAACTAACATTTTTCTACATATGGAAGTACAAG  600

seq1  GATCCATTTCTTGTGTGGTTTGAACTCCCAGAAGCCATGGATTACTGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCATTTCTTGTGTGGTTTGAACTCCCAGAAGCCATGGATTACTGTTC  650

seq1  CCCTCCCCCTTCCCTGTACCCTTGCCAGCATATGCTGTCACTTGCTTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCCTTCCCTGTACCCTTGCCAGCATATGCTGTCACTTGCTTCAT  700

seq1  CGATCTTGACCAATGTTATTAGGTTAAGGTGAAATCTCACAGTAGTTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCTTGACCAATGTTATTAGGTTAAGGTGAAATCTCACAGTAGTTTTA  750

seq1  ATTTGTGTTTCCCTGGTGGCTAAGGATGTTGGACATTTCTTTAGCTGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGTTTCCCTGGTGGCTAAGGATGTTGGACATTTCTTTAGCTGTTT  800

seq1  CTCAGTCATTTGTGTTTTGTCTTTTAAGAATTCTCATTTCAGTTATATAT  850
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTCAGTCATTTGTGTTTTGTCTTTT-AGAATTCTCATTTCAGTTATATAT  849

seq1  CTCAATTTTTTTAATTGGGTTGTTTTCTTAGTGTTAAGGGATTTTAAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATTTTTTTAATTGGGTTGTTTTCTTAGTGTTAAGGGATTTTAAAAA  899

seq1  TTTCTCTTTTTTTTCTTTTATTTTTTAAAAATGTATATGTGTGTGTGTAT  950
      ||||||||||||||| |||||||||| |||||||||||||||||||||||
seq2  TTTCTCTTTTTTTTC-TTTATTTTTT-AAAATGTATATGTGTGTGTGTAT  947

seq1  ATAGA  955
      |||||
seq2  ATAGA  952

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information