BAC Information

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BAC

Clone NameB6Ng01-232F07
Chromosome15 (Build37)
Map Location 56,214,230 - 56,330,947
singlet/doubletdoublet
Overlap genenone
Upstream geneCol14a1, Mrpl13, Mtbp, Sntb1, LOC665348, LOC100039908, Hba-ps3
Downstream geneHas2, EG594843, LOC435442, LOC100040067, LOC100039984, BC026439
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232F07.bB6Ng01-232F07.g
ACCGA044695GA044696
length1,1861,108
definitionB6Ng01-232F07.b B6Ng01-232F07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,214,230 - 56,215,427)(56,329,842 - 56,330,947)
sequence
gaattccctgcatctctaaagatgactaccattccgtatctgagtgaagt
gttttcaaaacagtttgaaaataccaaaaggcaagacgattcattgtcat
ttcccgggttgaaacaattctcattattttgatgttttagagaactggcc
tgttaactgcctggctggctgatggtggagtttctaacataaagcatgta
agaggttataaatagaataatcaaatgtccaggtgtggaatgagtgctcc
gactcccagacaagcaatgttgtgtgggcctcatgaatatggccattttt
aactcagccagagtaggaacaggggaatctatgctctgtggaagaccagt
atcttcagtataattgggtcctctgagcgtccagcctggctatgtgagcc
acacagtggagatgttgtctgtagactttgcacaaccctaatatagactt
cattgtgctacaacatcactatctggctgaaaagatcacttgtaccataa
atggtggtccacatagctaaccctcatcagtagatggctccaagaggctc
cacatcgtttctgatttttggacactgatgggtacaggtagttagattta
tttttatgtcattgaattctcttccataacataaaaataaaagttacata
aattgtaaaaattatccttgcccccatactttttattccttcattcccct
cctttcattgcttattttcatgtgtcaatttaagaagcagtctaaaatca
cctactatgtgtctcatgctttgccagtgaggacatgacaaacacagaat
atcagctacagttattctcataggcgagtgttgggtgagtataaacagtc
aatggaatctaaacaatacaagtatggtgtcttagatagatgttccgttg
ctgtgataaataccctgacaaaaacagtgtaagaaagaaagggcttactt
ggcttagttcacagttcagttcaccagtgagcttgacccagctgatcgtg
gtgtactcccagtagggaaaaacggaataggatgctctcatttggatatc
ttcctcttttatgcaggacgaacccaagcccaggaaatgttgctactacc
tttagaactgtctttccctccaatcagctgaactagaagcctcttctagg
ctgaccagagctaatctattcagatgaatcttcata
gaattctcttatgtgtggcccttctttgataactctttatggaaagaggg
actgagatgcaatcatctctttcttcttctctggcaaaggacagacaaaa
gaaaaattggctagatcgagacacatgtaggcagaggaaaggaatttgga
ggagaaagaatagtctgggtaatttgggattgattaatatcatggtgtta
ttttaagcctgggaagggagtgggatgagaaagcttcaggctgatcctag
aggacatacacatttaggaggaaaatccacagagggatggaaacagagtc
actggagataaacccacaaagccagagacacacgggattctgccagaaaa
gaggaaagtggcagcctgccctcacagtctttccatagtgatgcaactac
gtaccttagaacacaaatatttggcaagaatgcttatgatgccacctcag
gttgctactctgattcagtccagatttgtgttgtcatagcagccacctca
gagaaccagaggcgaacaagattcagaaaacatactgagagtggaatttt
gaattcttctgtgtgggctgaagtacatagctcagtctgaacaagtatta
ccatgtcccacactgggatgttatatgcagtaatgaataaatccttacga
taaagccctctgtaaatatgaagtgctattgagatgtagagtaatacact
ggacatctttgttttccatcagacacatcccatgggatattttcttcctt
ccagaacatggacactccacagagagtgcatctggcgactctgactctgc
caagagttcaaagcaaattgttctaggtgaatggctgagaactagtgtgc
aaggtagtaaagacatggatctctgctgcctgaaggttaaaagatgcacc
aaaatgtacattgaggtaggtgtttcccctgggagaatgaaaggaagaaa
catttctgactaccttcccccaagcctcctttgctttaccctcccaaaaa
atttgcactttgacttaattgtaactttgtttttgatttcctgagtgtcc
ttgggttacctaatatcctggcttgcctccatagattgctcttttcttag
atctacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_56214230_56215427
seq2: B6Ng01-232F07.b_48_1233

seq1  GAATTCCCTGCATCTCTAAAGATGACTACCATTCCGTATCTGAGTGAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGCATCTCTAAAGATGACTACCATTCCGTATCTGAGTGAAGT  50

seq1  GTTTTCAAAACAGTTTGAAAATACCAAAAGGCAAGACGATTCATTGTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAAAACAGTTTGAAAATACCAAAAGGCAAGACGATTCATTGTCAT  100

seq1  TTCCCGGGTTGAAACAATTCTCATTATTTTGATGTTTTAGAGAACTGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCGGGTTGAAACAATTCTCATTATTTTGATGTTTTAGAGAACTGGCC  150

seq1  TGTTAACTGCCTGGCTGGCTGATGGTGGAGTTTCTAACATAAAGCATGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAACTGCCTGGCTGGCTGATGGTGGAGTTTCTAACATAAAGCATGTA  200

seq1  AGAGGTTATAAATAGAATAATCAAATGTCCAGGTGTGGAATGAGTGCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTTATAAATAGAATAATCAAATGTCCAGGTGTGGAATGAGTGCTCC  250

seq1  GACTCCCAGACAAGCAATGTTGTGTGGGCCTCATGAATATGGCCATTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCCAGACAAGCAATGTTGTGTGGGCCTCATGAATATGGCCATTTTT  300

seq1  AACTCAGCCAGAGTAGGAACAGGGGAATCTATGCTCTGTGGAAGACCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGCCAGAGTAGGAACAGGGGAATCTATGCTCTGTGGAAGACCAGT  350

seq1  ATCTTCAGTATAATTGGGTCCTCTGAGCGTCCAGCCTGGCTATGTGAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCAGTATAATTGGGTCCTCTGAGCGTCCAGCCTGGCTATGTGAGCC  400

seq1  ACACAGTGGAGATGTTGTCTGTAGACTTTGCACAACCCTAATATAGACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTGGAGATGTTGTCTGTAGACTTTGCACAACCCTAATATAGACTT  450

seq1  CATTGTGCTACAACATCACTATCTGGCTGAAAAGATCACTTGTACCATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTGCTACAACATCACTATCTGGCTGAAAAGATCACTTGTACCATAA  500

seq1  ATGGTGGTCCACATAGCTAACCCTCATCAGTAGATGGCTCCAAGAGGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGTCCACATAGCTAACCCTCATCAGTAGATGGCTCCAAGAGGCTC  550

seq1  CACATCGTTTCTGATTTTTGGACACTGATGGGTACAGGTAGTTAGATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCGTTTCTGATTTTTGGACACTGATGGGTACAGGTAGTTAGATTTA  600

seq1  TTTTTATGTCATTGAATTCTCTTCCATAACATAAAAATAAAAGTTACATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATGTCATTGAATTCTCTTCCATAACATAAAAATAAAAGTTACATA  650

seq1  AATTGTAAAAATTATCCTTGCCCCCATACTTTTTATTCCTTCATTCCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTAAAAATTATCCTTGCCCCCATACTTTTTATTCCTTCATTCCCCT  700

seq1  CCTTTCATTGCTTATTTTCATGTGTCAATTTAAGAAGCAGTCTAAAATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCATTGCTTATTTTCATGTGTCAATTTAAGAAGCAGTCTAAAATCA  750

seq1  CCTACTATGTGTCTCATGCTTTGCCAGTGAGGACATGACAAACACAGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTATGTGTCTCATGCTTTGCCAGTGAGGACATGACAAACACAGAAT  800

seq1  ATCAGCTACAGTTATTCTCATAGGCGAGTGTT-GGTGAGTATAAACAGTC  849
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATCAGCTACAGTTATTCTCATAGGCGAGTGTTGGGTGAGTATAAACAGTC  850

seq1  AATGGAATCTAAACAATACAAGTATGGTGTCTTAGATAGATGTTCCGTTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAATCTAAACAATACAAGTATGGTGTCTTAGATAGATGTTCCGTTG  900

seq1  CTGTGATAAATACCCTGACAAAAACAGTGTAAGAAAGAAAGGGCTTACTT  949
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTGTGATAAATACCCTGACAAAAACAGTGTAAGAAAGAAAGGGCTTAC-T  949

seq1  TGGCTTAGTTCACAGTTCAGTTCACCAGTGAGCTTGACCCAGCTGATCGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTAGTTCACAGTTCAGTTCACCAGTGAGCTTGACCCAGCTGATCGT  999

seq1  GGTGTACTCCCAGTAGGGAAAAACGGAATAAGGAATGCTCTCATTTGGAT  1049
      ||||||||||||||||||||||||||||||  | ||||||||||||||||
seq2  GGTGTACTCCCAGTAGGGAAAAACGGAATA--GGATGCTCTCATTTGGAT  1047

seq1  ATCTCCCTCCTTTTTATGCAGGACAGAACCCAAGCCCAAGGAAATGGTGC  1099
      |||| ||||  ||||||||||||| |||||||||||| |||||||| |||
seq2  ATCTTCCTC--TTTTATGCAGGAC-GAACCCAAGCCC-AGGAAATGTTGC  1093

seq1  TACCTACTTTTAG-ACTGTCTTTCCACTTCAATCAGCTGGACCTAGAAAG  1148
      || |||| ||||| ||||||||||| || ||||||||| || |||| |||
seq2  TA-CTACCTTTAGAACTGTCTTTCC-CTCCAATCAGCT-GAACTAG-AAG  1139

seq1  CCTCTTCTAGGCCTGACCAGAGGCTAATCTAATCAGGATAGATCTTCATA  1198
      ||||||||||| ||||||||| ||||||||| ||| |||  |||||||||
seq2  CCTCTTCTAGG-CTGACCAGA-GCTAATCTATTCA-GATGAATCTTCATA  1186

seq1: chr15_56329842_56330947
seq2: B6Ng01-232F07.g_70_1177 (reverse)

seq1  TGGTAGATCTAAG-AAAGAACCATCTATGGAAGCAAGCCA-GATATTAGG  48
      ||||||||||||| ||||| | ||||||||| |||||||| |||||||||
seq2  TGGTAGATCTAAGAAAAGAGCAATCTATGGAGGCAAGCCAGGATATTAGG  50

seq1  TAACCCAAGACCACTCAGGAAATC-AAAACAAAGTTACA--TTAGTC-AA  94
      |||||||||  ||||||||||||| ||||||||||||||  | |||| ||
seq2  TAACCCAAGGACACTCAGGAAATCAAAAACAAAGTTACAATTAAGTCAAA  100

seq1  GTGCAATTTTTTTGGGAGGGT-AAGCAAAGG-GGCTTGGGGGAAGGGTAG  142
      |||||| |||||||||||||| ||||||||| |||||||||||| |||||
seq2  GTGCAAATTTTTTGGGAGGGTAAAGCAAAGGAGGCTTGGGGGAA-GGTAG  149

seq1  TCAGAAATGTTTCTTCCTTTCATTCTCCCAGGGGAAAACACCTACCTCAT  192
      |||||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  TCAGAAATGTTTCTTCCTTTCATTCTCCCAGGGG-AAACACCTACCTCAA  198

seq1  TGTACATTTTGGTGCATCTTTTAACCTTCAGGCAGCAGAGATCCATGTCT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGTACATTTTGGTGCATCTTTTAACCTTCAGGCAGCAGAGATCCATGTC-  247

seq1  TTTACTACCTTTGCACACTAGTTCTCAGCCATTCACCTTAGAACAATTTG  292
      ||||||||| ||||||||||||||||||||||||||| ||||||||||||
seq2  TTTACTACC-TTGCACACTAGTTCTCAGCCATTCACC-TAGAACAATTTG  295

seq1  CTTTTGAACTCTTGGCAGAGTCAGAGTCGCCAGATGCACTCTCTGTGGAG  342
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-TTTGAACTCTTGGCAGAGTCAGAGTCGCCAGATGCACTCTCTGTGGAG  344

seq1  TGTCCATGTTCTGGAAGGAAGAAAATATCCCATGGGATGTGTCTGATGGA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATGTTCTGGAAGGAAGAAAATATCCCATGGGATGTGTCTGATGGA  394

seq1  AAACAAAGATGTCCAGTGTATTACTCTACATCTCAATAGCACTTCATATT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAGATGTCCAGTGTATTACTCTACATCTCAATAGCACTTCATATT  444

seq1  TACAGAGGGCTTTATCGTAAGGATTTATTCATTACTGCATATAACATCCC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGGGCTTTATCGTAAGGATTTATTCATTACTGCATATAACATCCC  494

seq1  AGTGTGGGACATGGTAATACTTGTTCAGACTGAGCTATGTACTTCAGCCC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGGACATGGTAATACTTGTTCAGACTGAGCTATGTACTTCAGCCC  544

seq1  ACACAGAAGAATTCAAAATTCCACTCTCAGTATGTTTTCTGAATCTTGTT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAAGAATTCAAAATTCCACTCTCAGTATGTTTTCTGAATCTTGTT  594

seq1  CGCCTCTGGTTCTCTGAGGTGGCTGCTATGACAACACAAATCTGGACTGA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTCTGGTTCTCTGAGGTGGCTGCTATGACAACACAAATCTGGACTGA  644

seq1  ATCAGAGTAGCAACCTGAGGTGGCATCATAAGCATTCTTGCCAAATATTT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGTAGCAACCTGAGGTGGCATCATAAGCATTCTTGCCAAATATTT  694

seq1  GTGTTCTAAGGTACGTAGTTGCATCACTATGGAAAGACTGTGAGGGCAGG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTAAGGTACGTAGTTGCATCACTATGGAAAGACTGTGAGGGCAGG  744

seq1  CTGCCACTTTCCTCTTTTCTGGCAGAATCCCGTGTGTCTCTGGCTTTGTG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCACTTTCCTCTTTTCTGGCAGAATCCCGTGTGTCTCTGGCTTTGTG  794

seq1  GGTTTATCTCCAGTGACTCTGTTTCCATCCCTCTGTGGATTTTCCTCCTA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTATCTCCAGTGACTCTGTTTCCATCCCTCTGTGGATTTTCCTCCTA  844

seq1  AATGTGTATGTCCTCTAGGATCAGCCTGAAGCTTTCTCATCCCACTCCCT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTATGTCCTCTAGGATCAGCCTGAAGCTTTCTCATCCCACTCCCT  894

seq1  TCCCAGGCTTAAAATAACACCATGATATTAATCAATCCCAAATTACCCAG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGCTTAAAATAACACCATGATATTAATCAATCCCAAATTACCCAG  944

seq1  ACTATTCTTTCTCCTCCAAATTCCTTTCCTCTGCCTACATGTGTCTCGAT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTCTTTCTCCTCCAAATTCCTTTCCTCTGCCTACATGTGTCTCGAT  994

seq1  CTAGCCAATTTTTCTTTTGTCTGTCCTTTGCCAGAGAAGAAGAAAGAGAT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCAATTTTTCTTTTGTCTGTCCTTTGCCAGAGAAGAAGAAAGAGAT  1044

seq1  GATTGCATCTCAGTCCCTCTTTCCATAAAGAGTTATCAAAGAAGGGCCAC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCATCTCAGTCCCTCTTTCCATAAAGAGTTATCAAAGAAGGGCCAC  1094

seq1  ACATAAGAGAATTC  1106
      ||||||||||||||
seq2  ACATAAGAGAATTC  1108