BAC Information

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BAC

Clone NameB6Ng01-232H18
Chromosome15 (Build37)
Map Location 36,223,012 - 36,224,081
singlet/doubletsinglet
Overlap genenone
Upstream geneOsr2, Vps13b, EG666183, Cox6c, Rgs22, Fbxo43, 1700074I03Rik, Polr2k, Spag1, Rnf19
Downstream geneLOC670773, EG268795, EG545101, Ankrd46, 4631426E05Rik, Pabpc1, LOC626746, Ywhaz, Zfp706, LOC670911, LOC667492, LOC100041288, Grhl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232H18.bB6Ng01-232H18.g
ACCGA044813GA044814
length1,2131,075
definitionB6Ng01-232H18.b B6Ng01-232H18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggctagcctaggctacatagtaagacttaaagaactcaagaa
ggtggacctcagaaaatcaaataacccccttaaaaaatggggctcagaac
tgaacaaagaattctcacctgaggaataccgaatggcagagaagcacctg
aaaaaatgttcaacatccttaatcatcagggaaatgcaaatcaaaacaac
cctgagattccacctcacaccagtcagaatggctaagatcaaaaattcag
gtgacagcagatgctggcgaggatgtggagaaagaggaacactcctccat
tgttggtgggattgcaggcttgtacaaccactctggaaatcagtctggcg
gttcctcagaaaattggacatagtactaccggaggatccagcaatacctc
tcctgggcatatatccagaagaagccccaactggtaagaaggacacatgc
tccactatgttcatagcagccttatttataatagccagaaactggaaaga
acccagatgcccctcaacagaggaatggatacagaaaatgtggtacatct
acacaatggagtactactcagctattaaaaagaatgaatttatgaaattc
ctagccaaatggatggacctggagagcatcatcctgagtgaggtaacaca
atcacaaaggaactcacacaatatgtactcactgataagtggatactagc
ccaaaacctaggatacccacgatataagatacaattccctaaacacatga
aactcaagaaaaatgaagactgaagtgtggacactatgcccctccttaga
agtgggaacaaaacacccatggaaggagttacagaaacaaagtatggagc
tgagatgaaaggatggaccatgtagagactgccatatccagggatccacc
ccataatcagcttccaaatgctgacaccattgcatacactagcaagattt
tactgaaaggacccagatgtagctgtctcttgtgagactatgcccgggtc
ctagcaaacacagaagtggatgcttcacagtcagctaatggatggatcac
aagggcttccattgaggagctagaagaagttactcaaggagcttaaggga
ttctccatcctatagttgaacaacatatgaactagcagtacctggagctc
tggactctagctgcaatgtattcaaagaatgcctagtccggtctcactac
acatgggagtctg
gaattcaagaaccgctgagaagaaaatgggtcagctcttctgaaacagga
gggagggtagccctggacaaagcttggtgaaagggcagatgagttccacc
gctaagttagcttggccagtcagaaaggccattaagcgagcagttaagct
gtaccacatgttcccttcaggatgcacctgccttgctacaggtccaaagc
aataagatcaacccaacaggtgatcaacccaacaggtgatcaacccaaca
ggtgatcaacccaacaggtgatgagaacctcccaaactgtcagccaaaat
aaaccttttctctttataagttgatttttttttttttttggcattttgtt
agagtaacaaaaagctagctagcaaggcatggcttgaatatggcttgttc
tcttttgtaatgaataatgcctaacaaggtgaatacagtattgctgattc
tcaatcagcaattattgtgtagagtgtaagttttaaagacttagatatga
ggaaggtgctccaaacagtactgtaggaattgtgttctggagggattgct
tatctgaggttatgtgctggtgtatagatttaaagagaattaaaccatca
ttttcctaaggcttagaaggcaatcagatgggaaatgtagggactagcaa
aggggaaggacaaggaatgatggtggagcgtgtaaggaggatgaccggag
tctgggccacaggtggatagaggggaggtgaactagccaagtcataaaac
tacagtccctctaagggctttgagccagtgtagtaaaaagcttttcagtg
tctagactagttagtgggccagatcccaactcaagtttttattgtgaatt
atgtgatgttcaaacaaggactatgtctagtttgtagcctgatctttttt
attgaattaactagaaagggcagagagacagaagaaatgaattaaagaaa
atgtttttaacttctaataaatgcatgattgtatttaaatctattaaaat
attgagttattcagatttctgtatgtgtatagtatggtgaatatgtatgg
tgcatgaacatgcatcaacatactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_36223012_36224081
seq2: B6Ng01-232H18.g_67_1141 (reverse)

seq1  AAGTATTGTGATGCATGTTCATGCA-CATACATATTCA-CATACTATACA  48
      ||||||  ||||||||||||||||| |||||||||||| |||||||||||
seq2  AAGTATGTTGATGCATGTTCATGCACCATACATATTCACCATACTATACA  50

seq1  CATACAGAAATCTGAATAACTCATAATTTTAATAGATTTAAATACATTCA  98
      |||||||||||||||||||||||  ||||||||||||||||||||| || 
seq2  CATACAGAAATCTGAATAACTCAATATTTTAATAGATTTAAATACAATC-  99

seq1  ATGCATTTAATAG-AGTT-AAAACATTTTC-TTAATTCATTTCTTCTGTC  145
      ||||||||| ||| |||| ||||||||||| |||||||||||||||||||
seq2  ATGCATTTATTAGAAGTTAAAAACATTTTCTTTAATTCATTTCTTCTGTC  149

seq1  TCTCTGCCCTTTCTAGTTAATTCAATTAAAAAGATCAGGCTACAAACTAG  195
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCTCTGCCCTTTCTAGTTAATTCAATAAAAAAGATCAGGCTACAAACTAG  199

seq1  ACATAGTCC-TGTTTGAACATTCACATAATTCACAATAAAAACTTGAGTT  244
      ||||||||| |||||||||| |||||||||||||||||||||||||||||
seq2  ACATAGTCCTTGTTTGAACA-TCACATAATTCACAATAAAAACTTGAGTT  248

seq1  GGGATCTGGCCCACT-ACTAGTCTAGACACTGAAAAGCTTTTTACTACAC  293
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGGATCTGGCCCACTAACTAGTCTAGACACTGAAAAGCTTTTTACTACAC  298

seq1  TGGCTCAAAGCCCTTAGAGGGACTGTAGTTTTATGACTTGGCTAGTTCAC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCAAAGCCCTTAGAGGGACTGTAGTTTTATGACTTGGCTAGTTCAC  348

seq1  CTCCCCTCTATCCACCTGTGGCCCAGACTCCGGTCATCCTCCTTACACGC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTCTATCCACCTGTGGCCCAGACTCCGGTCATCCTCCTTACACGC  398

seq1  TCCACCATCATTCCTTGTCCTTCCCCTTTGCTAGTCCCTACATTTCCCAT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCATCATTCCTTGTCCTTCCCCTTTGCTAGTCCCTACATTTCCCAT  448

seq1  CTGATTGCCTTCTAAGCCTTAGGAAAATGATGGTTTAATTCTCTTTAAAT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTGCCTTCTAAGCCTTAGGAAAATGATGGTTTAATTCTCTTTAAAT  498

seq1  CTATACACCAGCACATAACCTCAGATAAGCAATCCCTCCAGAACACAATT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACACCAGCACATAACCTCAGATAAGCAATCCCTCCAGAACACAATT  548

seq1  CCTACAGTACTGTTTGGAGCACCTTCCTCATATCTAAGTCTTTAAAACTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAGTACTGTTTGGAGCACCTTCCTCATATCTAAGTCTTTAAAACTT  598

seq1  ACACTCTACACAATAATTCCTGATTGAGAATCAGCAATACTGTATTCACC  643
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACACTCTACACAATAATTGCTGATTGAGAATCAGCAATACTGTATTCACC  648

seq1  TTGTTAGGCATTATTCATTACAAAAGAGAACAAGCCATATTCAAGCCATG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGGCATTATTCATTACAAAAGAGAACAAGCCATATTCAAGCCATG  698

seq1  CCTTGCTAGCTAGCTTTTTGTTACTCTAACAAAATGCCAAAAAAAAAAAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCTAGCTAGCTTTTTGTTACTCTAACAAAATGCCAAAAAAAAAAAA  748

seq1  AAATCAACTTATAAAGAGAAAAGGTTTATTTTGGCTGACAGTTTGGGAGG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAACTTATAAAGAGAAAAGGTTTATTTTGGCTGACAGTTTGGGAGG  798

seq1  TTCTCATCACCTGTTGGGTTGATCACCTGTTGGGTTGATCACCTGTTGGG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATCACCTGTTGGGTTGATCACCTGTTGGGTTGATCACCTGTTGGG  848

seq1  TTGATCACCTGTTGGGTTGATCTTATTGCTTTGGACCTGTAGCAAGGCAG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCACCTGTTGGGTTGATCTTATTGCTTTGGACCTGTAGCAAGGCAG  898

seq1  GTGCATCCTGAAGGGAACATGTGGTACAGCTTAACTGCTCGCTTAATGGC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATCCTGAAGGGAACATGTGGTACAGCTTAACTGCTCGCTTAATGGC  948

seq1  CTTTCTGACTGGCCAAGCTAACTTAGCGGTGGAACTCATCTGCCCTTTCA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGACTGGCCAAGCTAACTTAGCGGTGGAACTCATCTGCCCTTTCA  998

seq1  CCAAGCTTTGTCCAGGGCTACCCTCCCTCCTGTTTCAGAAGAGCTGACCC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCTTTGTCCAGGGCTACCCTCCCTCCTGTTTCAGAAGAGCTGACCC  1048

seq1  ATTTTCTTCTCAGCGGTTCTTGAATTC  1070
      |||||||||||||||||||||||||||
seq2  ATTTTCTTCTCAGCGGTTCTTGAATTC  1075