BAC Information

Click to search

BAC

Clone NameB6Ng01-234O09
Chromosome15 (Build37)
Map Location 26,094,076 - 26,225,574
singlet/doubletdoublet
Overlap genenone
Upstream gene4930445E18Rik, Basp1, EG432939, LOC100040583, Myo10, LOC100040602, Ppia-ps15_175.1, 1810015C04Rik, Zfp622
Downstream geneAK162044, Fbxl7, LOC622531, LOC625311
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234O09.bB6Ng01-234O09.g
ACCGA046520GA046521
length1,1411,059
definitionB6Ng01-234O09.b B6Ng01-234O09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,094,076 - 26,094,608)(26,224,515 - 26,225,574)
sequence
gaattctacatcttgatatgaaggaagagactgtctcttgcaggcagata
ggaggaaggttaccctcacacagggaagagcttcaaagcccacccccaca
gttatgctgttctttcaacaaggcccccaacaaggccacatgtcttaatg
gtttcatttccaatgggtcaagcatattcaaaccaccacattccactttc
tggcacccacaagcttgttcaaacacataagtctatgggagtcatatcta
accatagcaaggaaaataaatttattccaacttcataagtcttcgtaatc
catagcagtctcaataatgttaaaagttcacagttcaaagcctcttctga
gattcatgtaatctcttaactgtaatgccccaagaaatcaaaataaaaaa
agcagatcacatacctgcaaatcacacaggatatacactgtaattccaaa
aaggtcatggtgaggaaatactggatcaaagcaagacagaaaacaagctg
gacaaactccaaactctacatccccacacctggagtcaaagtgccttaaa
gatctccaactattttcatttttgttgactacaacaaacttctttctctt
tggctggttccactcccttttagcggttttcctcagcagatatcccatga
gtctggcatttgtaacatcttggggtacctaaggcccccttcctggcttc
agaaatttggtgatttttacacactaccaagtccagctacatcatgagat
acaaccttggctatctctggaacatagcttctttgtgctctcagaaaaca
cttcccagaagatatcacctcagtgatgctggtctctttctaatcagctc
cagctaactagcatcaattgtcccaatagtcccttcgactcttaacttta
aaaccagagccacatagatgaagctgccaagttctgatgcttgctgaggc
tggaatatgacttgttctattacacccttcattgctaggacttggctgtc
ctgaacttgctctataaatgaccttgaactcaggatatctgcatgtattc
tgttcttctcagttctggatacgtgtgaccaccaatgcctgtacgtatgc
tttctttttcttgaagaattcctaaggtttaaaagtagaaa
gaattcaaacactggagacactggaggctttttttttttttttttttttt
ttttttgcttgaaagtagaagatttaaggaaaagggcaatgcctaaaact
aactgagctggctatgcacagcataaggcatatgcttaaagtaaaagtta
atttaaagtagattaaatgtaatgcatatggaccaacaatatggctcagc
atgtaaaatccggtgccacctaacctgacgatctgtgtcccacatccatg
acacacagggtgaaaggaaggaacagatgcccacaggttgtccgctgact
tccacagatgcactatggaatgtgtgtacccccaatgtacaagcacacat
gtatacacacacacacacacacacacacacacacacacacacacacacac
acaagcaagcaaatgtaacgaaggcaacataatccagtgtgacgcaatgg
gagaagaaaggcatctcagacaaatggagccacatgccctctcagctcat
cccttgatttcttcagtgctccgtgcaaaggtttcctgctgacttcaaag
gagagcttgggtttttgctttggaagctagtagctagactttggaaatta
taacccttggtgaattttaaatctcctagaacggttattcagtttgtgct
gaaatgcacatactaagcagaaccaaacattggagtttgtgtttctagga
ggtgatgttgaaaacagatggaccagcaaaatgaaaatcaagagctaaac
acaaaaagcaggcaggcagggagagaaccaagaggctatgaccaacggga
gggcagcttccttttttaaacaaaataattgtgatatttttattaactaa
ttaaaatttcatgcaatgtatttgcctcagataaacaacttcctacttag
cttcctccccagatccatctggacctctcctcccctgcaagtttgatact
taaatttatttgggttgttttgtttgtttgttttggttttgggttttgtt
ttttaggtcatcagctctacctagcctatatgattgtggtcctgtagtac
tctagatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_26094076_26094608
seq2: B6Ng01-234O09.b_657_1187

seq1  CACTCCCTTTTAGCGGTTTTCCTCAGCAGATATCCCATGAGTCTGGCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCTTTTAGCGGTTTTCCTCAGCAGATATCCCATGAGTCTGGCATT  50

seq1  TGTAACATCTTGGGGTACCTAAGGCCCCCTTCCTGGCTTCAGAAATTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACATCTTGGGGTACCTAAGGCCCCCTTCCTGGCTTCAGAAATTTGG  100

seq1  TGATTTTTACACACTACCAAGTCCAGCTACATCATGAGATACAACCTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTACACACTACCAAGTCCAGCTACATCATGAGATACAACCTTGG  150

seq1  CTATCTCTGGAACATAGCTTCTTTGTGCTCTCAGAAAACACTTCCCAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTCTGGAACATAGCTTCTTTGTGCTCTCAGAAAACACTTCCCAGAA  200

seq1  GATATCACCTCAGTGATGCTGGTCTCTTTCTAATCAGCTCCAGCTAACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCACCTCAGTGATGCTGGTCTCTTTCTAATCAGCTCCAGCTAACTA  250

seq1  GCATCAATTGTCCCAATAGTCCCTTCGACTCTTAACTTTAAAACCAGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAATTGTCCCAATAGTCCCTTCGACTCTTAACTTTAAAACCAGAGC  300

seq1  CACATAGATGAAGCTGCCAAGTTCTGATGCTTGCTGAGGCTGGAATATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGATGAAGCTGCCAAGTTCTGATGCTTGCTGAGGCTGGAATATGA  350

seq1  CTTGTTCTATTACACCCTTCATTGCTAGGACTTGGCTGTCCTGGAACTTG  400
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTTGTTCTATTACACCCTTCATTGCTAGGACTTGGCTGTCCT-GAACTTG  399

seq1  CTCTATAAATTGACCTTGAACTCA-GATATCTGCATGTA-TCTG-TCTTC  447
      ||||||||| |||||||||||||| |||||||||||||| |||| |||||
seq2  CTCTATAAA-TGACCTTGAACTCAGGATATCTGCATGTATTCTGTTCTTC  448

seq1  TCAGTTCTGGGATTAACGGTGTGAACCACC-ATGCCTGTACCTATGCTTT  496
      |||||||| ||||  || ||||| |||||| |||||||||| ||||||||
seq2  TCAGTTCT-GGAT--AC-GTGTG-ACCACCAATGCCTGTACGTATGCTTT  493

seq1  TCTTTTCTTGAAGAA-TCCATAGTTTTAAAAGTAGAAA  533
        ||||||||||||| |||  || ||||||||||||||
seq2  CTTTTTCTTGAAGAATTCCTAAGGTTTAAAAGTAGAAA  531

seq1: chr15_26224515_26225574
seq2: B6Ng01-234O09.g_68_1126 (reverse)

seq1  AGATCTAGAGTACTACA-GACAACAATCATAATAGCCTTAGGTAGAGCTG  49
      ||||||||||||||||| ||| |||||||| |||| | ||||||||||||
seq2  AGATCTAGAGTACTACAGGACCACAATCAT-ATAGGC-TAGGTAGAGCTG  48

seq1  ATGACACTAAAAAAAACAAAAAACCAAAAACAAAAACAAAACAAAACAAA  99
      ||||| |||||||    | |||||| ||||| ||||||||   |||||||
seq2  ATGAC-CTAAAAA----ACAAAACCCAAAACCAAAACAAA--CAAACAAA  91

seq1  ACAA-CCAAATAAATTAAAGTATACAAACTTGCAGGGGA-GAGAGGTCCA  147
      |||| ||||||||||| |||||| ||||||||||||||| ||||||||||
seq2  ACAACCCAAATAAATTTAAGTAT-CAAACTTGCAGGGGAGGAGAGGTCCA  140

seq1  GATGGATCT-GGGAGG-AGCTAAGTAGG-AGTTGTTTATCTGAGGC-AAT  193
      ||||||||| |||||| ||||||||||| ||||||||||||||||| |||
seq2  GATGGATCTGGGGAGGAAGCTAAGTAGGAAGTTGTTTATCTGAGGCAAAT  190

seq1  ACATTGCATGAAATTTTAAATTAGTTAATAAAAATATCACAATTATTTTG  243
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACATTGCATGAAATTTT-AATTAGTTAATAAAAATATCACAATTATTTTG  239

seq1  TTTAAAAAAGGAAGCTGCCCT-CCGTTGGTCATAGCCTCTTGGTTCTCT-  291
      ||||||||||||||||||||| ||||||||||||||||||||||||||| 
seq2  TTTAAAAAAGGAAGCTGCCCTCCCGTTGGTCATAGCCTCTTGGTTCTCTC  289

seq1  CCTGCCTGCCTGC-TTTTGTGTTTAGCTCTTGATTTTCATTTTGCTGGTC  340
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTGCCTGCTTTTTGTGTTTAGCTCTTGATTTTCATTTTGCTGGTC  339

seq1  CATCTGTTTTCAACATCACCTCCTAGAAACACAAACTCCAATGTTTGGTT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTTTTCAACATCACCTCCTAGAAACACAAACTCCAATGTTTGGTT  389

seq1  CTGCTTAGTATGTGCATTTCAGCACAAACTGAATAACCGTTCTAGGAGAT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTAGTATGTGCATTTCAGCACAAACTGAATAACCGTTCTAGGAGAT  439

seq1  TTAAAATTCACCAAGGGTTATAATTTCCAAAGTCTAGCTACTAGCTTCCA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTCACCAAGGGTTATAATTTCCAAAGTCTAGCTACTAGCTTCCA  489

seq1  AAGCAAAAACCCAAGCTCTCCTTTGAAGTCAGCAGGAAACCTTTGCACGG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAAACCCAAGCTCTCCTTTGAAGTCAGCAGGAAACCTTTGCACGG  539

seq1  AGCACTGAAGAAATCAAGGGATGAGCTGAGAGGGCATGTGGCTCCATTTG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGAAGAAATCAAGGGATGAGCTGAGAGGGCATGTGGCTCCATTTG  589

seq1  TCTGAGATGCCTTTCTTCTCCCATTGCGTCACACTGGATTATGTTGCCTT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGATGCCTTTCTTCTCCCATTGCGTCACACTGGATTATGTTGCCTT  639

seq1  CGTTACATTTGCTTGCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTACATTTGCTTGCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  689

seq1  GTGTGTGTGTGTGTGTATACATGTGTGCTTGTACATTGGGGGTACACACA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTATACATGTGTGCTTGTACATTGGGGGTACACACA  739

seq1  TTCCATAGTGCATCTGTGGAAGTCAGCGGACAACCTGTGGGCATCTGTTC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATAGTGCATCTGTGGAAGTCAGCGGACAACCTGTGGGCATCTGTTC  789

seq1  CTTCCTTTCACCCTGTGTGTCATGGATGTGGGACACAGATCGTCAGGTTA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTTCACCCTGTGTGTCATGGATGTGGGACACAGATCGTCAGGTTA  839

seq1  GGTGGCACCGGATTTTACATGCTGAGCCATATTGTTGGTCCATATGCATT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCACCGGATTTTACATGCTGAGCCATATTGTTGGTCCATATGCATT  889

seq1  ACATTTAATCTACTTTAAATTAACTTTTACTTTAAGCATATGCCTTATGC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTAATCTACTTTAAATTAACTTTTACTTTAAGCATATGCCTTATGC  939

seq1  TGTGCATAGCCAGCTCAGTTAGTTTTAGGCATTGCCCTTTTCCTTAAATC  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATAGCCAGCTCAGTTAGTTTTAGGCATTGCCCTTTTCCTTAAATC  989

seq1  TTCTACTTTCAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCTCCAG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTTTCAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCTCCAG  1039

seq1  TGTCTCCAGTGTTTGAATTC  1060
      ||||||||||||||||||||
seq2  TGTCTCCAGTGTTTGAATTC  1059