BAC Information

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BAC

Clone NameB6Ng01-236A01
Chromosome15 (Build37)
Map Location 66,133,317 - 66,134,352
singlet/doubletsinglet
Overlap genenone
Upstream geneC920006C10Rik, Oc90, F930104E18Rik, LOC100040835, Kcnq3
Downstream geneLrrc6, LOC100040860, Tmem71, LOC100040881, Phf20l1, Tg, Sla, Wisp1, Ndrg1, LOC100040667, St3gal1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-236A01.bB6Ng01-236A01.g
ACCGA047334GA047335
length5231,034
definitionB6Ng01-236A01.b B6Ng01-236A01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atgctcactgtaatttttaaaacagatttttaatttttttatgtatgaat
gcttgcttgcatggctgtatatataccatgtacatgcctggggctcacag
aggggcaaaagagggcactggagtctctagagctggagttacaggcagtc
aggagccattgtgcttgaaacctgaactcagctcctcttgcaagagcaac
aagcattcttagccactgagccatgtctgcatcccccactgtaatgttaa
acacacaaagatgaaaggggaggagggaatcaattaccccagacagagtc
ccatggctatgaaaactcaaaccctacagaccgggttaaaatgattctca
gagctgtattgctttctgatatgcataccccaggctccctttgctccaag
gctgttactctgatggccctctttgttttacaaaacacaatgagccttgg
tttaagtctcagtgtaggggactgccagggccaggaagtaggagtggatg
ggttggtaagcagggggagggga
gaattcactgagtgaacccaatgcatcatgtgctatgctctgccctttgt
ttgtttgcataatgagaataatgagaactataaggctggtactagggtta
gactgcgtaatctcacactctagcatcttcatactactctactggactga
agaagcctcccatcactctctgctctcctcctgtttgcctgtaagtctcc
ttgtgtacttattcgctttctaggcttcccatgctaggagggaagataca
cagaatgttgtcctagctttcgagcccagaaaacaagctgctgtactgtg
tccagttaatcctccccttcagggatctctgtggctcagtctctcacctt
tcacaaatgctgctgagactgtgcagtcttccgtttgtaactgtatccct
atagccctgccatgattctctcccagctttcttttctttattccatggac
gtcctgtagcatattccaagcacatttcacatttactatgcctgtcgtct
catccccagaacaggagcattccataaaggcagagatctttgttttcctt
agtgacacactgaatgcaggtaaacatgccatttcaccatggaactcctt
tgacagacctggagtgaggtctgtgccgagtcaccaagggtccctataag
caatgtgagttcaggcttttccccttaaataccgtaagaaaagcattaca
gacagttttttacagaagtggacatgagctggtttacatttctatgtcat
gctagttgccatggagagaactggagagttcaggggaaccagtgggtgtc
actacaggaagcaggagagttgtgggtggctcgagtccaggtgtgaagac
tggggaaataatgggattgggacagctgtgggcagacttggagctggcag
gacatgctgacctgctgagcacagggtggacagaggcagagaatcaatga
gtgccgccaagtgtgagtcttgaattacaaaggacaaagtgatatagttt
actgataaaagtaagctgaagggttgtgttgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_66133317_66134352
seq2: B6Ng01-236A01.g_64_1097

seq1  GAATTCACTGAGTGAACCCAATGCATCATGTGCTATGCTCTGCCCTTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGAGTGAACCCAATGCATCATGTGCTATGCTCTGCCCTTTGT  50

seq1  TTGTTTGCATAATGAGAATAATGAGAACTATAAGGCTGGTACTAGGGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGCATAATGAGAATAATGAGAACTATAAGGCTGGTACTAGGGTTA  100

seq1  GACTGCGTAATCTCACACTCTAGCATCTTCATACTACTCTACTGGACTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCGTAATCTCACACTCTAGCATCTTCATACTACTCTACTGGACTGA  150

seq1  AGAAGCCTCCCATCACTCTCTGCTCTCCTCCTGTTTGCCTGTAAGTCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCTCCCATCACTCTCTGCTCTCCTCCTGTTTGCCTGTAAGTCTCC  200

seq1  TTGTGTACTTATTCGCTTTCTAGGCTTCCCATGCTAGGAGGGAAGATACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTACTTATTCGCTTTCTAGGCTTCCCATGCTAGGAGGGAAGATACA  250

seq1  CAGAATGTTGTCCTAGCTTTCGAGCCCAGAAAACAAGCTGCTGTACTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGTTGTCCTAGCTTTCGAGCCCAGAAAACAAGCTGCTGTACTGTG  300

seq1  TCCAGTTAATCCTCCCCTTCAGGGATCTCTGTGGCTCAGTCTCTCACCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTAATCCTCCCCTTCAGGGATCTCTGTGGCTCAGTCTCTCACCTT  350

seq1  TCACAAATGCTGCTGAGACTGTGCAGTCTTCCGTTTGTAACTGTATCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAATGCTGCTGAGACTGTGCAGTCTTCCGTTTGTAACTGTATCCCT  400

seq1  ATAGCCCTGCCATGATTCTCTCCCAGCTTTCTTTTCTTTATTCCATGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCCTGCCATGATTCTCTCCCAGCTTTCTTTTCTTTATTCCATGGAC  450

seq1  GTCCTGTAGCATATTCCAAGCACATTTCACATTTACTATGCCTGTCGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGTAGCATATTCCAAGCACATTTCACATTTACTATGCCTGTCGTCT  500

seq1  CATCCCCAGAACAGGAGCATTCCATAAAGGCAGAGATCTTTGTTTTCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCAGAACAGGAGCATTCCATAAAGGCAGAGATCTTTGTTTTCCTT  550

seq1  AGTGACACACTGAATGCAGGTAAACATGCCATTTCACCATGGAACTCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACACACTGAATGCAGGTAAACATGCCATTTCACCATGGAACTCCTT  600

seq1  TGACAGACCTGGAGTGAGGTCTGTGCCGAGTCACCAAGGGTCCCTATAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGACCTGGAGTGAGGTCTGTGCCGAGTCACCAAGGGTCCCTATAAG  650

seq1  CAATGTGAGTTCAGGCTTTTCCCCTTAAATACCGTAAGAAAAGCATTACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTGAGTTCAGGCTTTTCCCCTTAAATACCGTAAGAAAAGCATTACA  700

seq1  GACAGTTTTTTACAGAAGTGGACATGAGCTGGTTTACATTTCTATGTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTTTTTTACAGAAGTGGACATGAGCTGGTTTACATTTCTATGTCAT  750

seq1  GCTAGTTGCCATGGAGAGAACTGGAGAGTTCAGGGGAACCAGTGGGTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTTGCCATGGAGAGAACTGGAGAGTTCAGGGGAACCAGTGGGTGTC  800

seq1  ACTACAGGAAGCAGGAGAGTTGTGGGTGGCTCGAGTCCAGGTGTGAAGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAGGAAGCAGGAGAGTTGTGGGTGGCTCGAGTCCAGGTGTGAAGAC  850

seq1  TGGGGAAATAATGGGATTGGGACAGCTGTGGGCAGACTTGGAGCTGGCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAAATAATGGGATTGGGACAGCTGTGGGCAGACTTGGAGCTGGCAG  900

seq1  GACATGCTGACCTGCTGAGCACAGGGTGGACAGAGGCAGAGAATCAATGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGCTGACCTGCTGAGCACAGGGTGGACAGAGGCAGAGAATCAATGA  950

seq1  GTGCCGCCAAGTGTGAGTCTTGAATTACAAAGGACAAAGTGATATAGTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCGCCAAGTGTGAGTCTTGAATTACAAAGGACAAAGTGATATAGTTT  1000

seq1  ACTGATAAAAGTAAGGCTGAAGGGGTGTGTGTGTGT  1036
      |||||||||||||| ||||||||| ||||| |||||
seq2  ACTGATAAAAGTAA-GCTGAAGGGTTGTGT-TGTGT  1034