BAC Information

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BAC

Clone NameB6Ng01-236J12
Chromosome15 (Build37)
Map Location 59,781,009 - 59,782,099
singlet/doubletsinglet
Overlap genenone
Upstream geneMtss1, LOC100040330, EG268809, LOC665565, Sqle, E430025E21Rik, Nsmce2, Trib1, LOC665602
Downstream geneEG632248, LOC665613, 4933412E24Rik, LOC100040266, LOC623048, LOC211832, LOC623094, EG632412, LOC100040311, D330050I23Rik, 9930014A18Rik, A1bg
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-236J12.bB6Ng01-236J12.g
ACCGA047774GA047775
length1,095190
definitionB6Ng01-236J12.b B6Ng01-236J12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggaagcttcatgaattccagctgtttgagcaaaatctcttcc
caagtctcctgtttaccaaaatcaatacagaaataggagtagcctcagga
ggccaggtatgtatcaaaataataactatagatcaacgagggagacagta
gcacacagaaaactaaacattcagcttaaattcaggtgacttaggaaaaa
aatcccaatttcagagctgctggaaaaaggcctgctaatatgcctagtgt
gtgatacgaagtgagctgatgaatggatactcagtaataaagaaatggat
ggaatcagaaaatagtatatattgagagaggcaacctgggtggagcaaga
caaaccttgcatgttctctctttcatatgtgaatttttatttcctatatt
ttattttcattctagacctgtatgccatgtaatcttggtcgtgtccactt
cccacttcctccctccagcttttcccacactccagccacatagttccacg
accccctgttttcctgtctaatttgtgttctagtagaccactaagagtgt
aagtaatgcttcccatatttgtatgtgtgtgggctcatgtactgcgccag
aggtaacctaccaataactgttaccccagaagagaaatgactttccctcc
ttcagcagccaccaactgccactaacacctcaattagggagggagcttag
gagccccttcctgctttatgctcaaattttaactctcttgttcttatgga
gatcttgtgcaagaagtggggcttctctgaattcatgtaagtaatggcca
catcatgttcatggcactcactcctccatcctctgttccttatgttcttt
ctccccaggtttgatgatactgcccctggagccttgatttttttttagat
ttatttaacttttagatttatttaacatctgtagaaacctgaaagtgacc
aagaggacacagtcggagagtgaaggggaaggagcccttagagggagtag
agtggtagaacaggtaatatgaaaatagagagaacactgaatgtggccag
gtctaaataggatgaggatagtgagtttgggaagagaagaatgaa
ccatggtgtttactcacatctctgggtaccagcgaacagatataggacag
gaagtggagccagactataaacagaggcatatttcctccagctggtctcc
acctccccaaagttccataccttcttctaacagagctaccaattaagaac
caattgtttaaacacatgttcgtggggggtgggggggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_59781009_59782099
seq2: B6Ng01-236J12.b_49_1143 (reverse)

seq1  TTCA-TCTTCTCTCCC---ACTCACTATCCTCATCCCTATTTAGACCTTG  46
      |||| |||||||| ||   ||||||||||||||| ||||||||||||| |
seq2  TTCATTCTTCTCTTCCCAAACTCACTATCCTCAT-CCTATTTAGACCTGG  49

seq1  CCACATTCAGTGTTCTCTCCTATTTTCATATTACCTGTTCTACCACCTCT  96
      |||||||||||||||||| |||||||||||||||||||||||||| ||||
seq2  CCACATTCAGTGTTCTCT-CTATTTTCATATTACCTGTTCTACCA-CTCT  97

seq1  ACTCCCTCTTAAGGCT-CTTCCCCTTCACTCT-CGGCTGTGTCCTCTTGG  144
      ||||||||| | |||| ||||||||||||||| || ||||||||||||||
seq2  ACTCCCTCTAAGGGCTCCTTCCCCTTCACTCTCCGACTGTGTCCTCTTGG  147

seq1  TCACTTTCAGGTTTCTACAGATGTTAAATAAATCTAAAAGTTAAATAAAT  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTCAGGTTTCTACAGATGTTAAATAAATCTAAAAGTTAAATAAAT  197

seq1  CT-AAAAAAAATCAAGGCTCCAGGGGCAGTATCATCAAACCTGGGGAGAA  243
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAAAAAATCAAGGCTCCAGGGGCAGTATCATCAAACCTGGGGAGAA  247

seq1  AGAACATAAGGAACAGAGGATGGAGGAGTGAGTGCCATGAACATGATGTG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATAAGGAACAGAGGATGGAGGAGTGAGTGCCATGAACATGATGTG  297

seq1  GCCATTACTTACATGAATTCAGAGAAGCCCCACTTCTTGCACAAGATCTC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTACTTACATGAATTCAGAGAAGCCCCACTTCTTGCACAAGATCTC  347

seq1  CATAAGAACAAGAGAGTTAAAATTTGAGCATAAAGCAGGAAGGGGCTCCT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGAACAAGAGAGTTAAAATTTGAGCATAAAGCAGGAAGGGGCTCCT  397

seq1  AAGCTCCCTCCCTAATTGAGGTGTTAGTGGCAGTTGGTGGCTGCTGAAGG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCCCTCCCTAATTGAGGTGTTAGTGGCAGTTGGTGGCTGCTGAAGG  447

seq1  AGGGAAAGTCATTTCTCTTCTGGGGTAACAGTTATTGGTAGGTTACCTCT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAGTCATTTCTCTTCTGGGGTAACAGTTATTGGTAGGTTACCTCT  497

seq1  GGCGCAGTACATGAGCCCACACACATACAAATATGGGAAGCATTACTTAC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCAGTACATGAGCCCACACACATACAAATATGGGAAGCATTACTTAC  547

seq1  ACTCTTAGTGGTCTACTAGAACACAAATTAGACAGGAAAACAGGGGGTCG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTAGTGGTCTACTAGAACACAAATTAGACAGGAAAACAGGGGGTCG  597

seq1  TGGAACTATGTGGCTGGAGTGTGGGAAAAGCTGGAGGGAGGAAGTGGGAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTATGTGGCTGGAGTGTGGGAAAAGCTGGAGGGAGGAAGTGGGAA  647

seq1  GTGGACACGACCAAGATTACATGGCATACAGGTCTAGAATGAAAATAAAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACACGACCAAGATTACATGGCATACAGGTCTAGAATGAAAATAAAA  697

seq1  TATAGGAAATAAAAATTCACATATGAAAGAGAGAACATGCAAGGTTTGTC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGAAATAAAAATTCACATATGAAAGAGAGAACATGCAAGGTTTGTC  747

seq1  TTGCTCCACCCAGGTTGCCTCTCTCAATATATACTATTTTCTGATTCCAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCCACCCAGGTTGCCTCTCTCAATATATACTATTTTCTGATTCCAT  797

seq1  CCATTTCTTTATTACTGAGTATCCATTCATCAGCTCACTTCGTATCACAC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCTTTATTACTGAGTATCCATTCATCAGCTCACTTCGTATCACAC  847

seq1  ACTAGGCATATTAGCAGGCCTTTTTCCAGCAGCTCTGAAATTGGGATTTT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGCATATTAGCAGGCCTTTTTCCAGCAGCTCTGAAATTGGGATTTT  897

seq1  TTTCCTAAGTCACCTGAATTTAAGCTGAATGTTTAGTTTTCTGTGTGCTA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTAAGTCACCTGAATTTAAGCTGAATGTTTAGTTTTCTGTGTGCTA  947

seq1  CTGTCTCCCTCGTTGATCTATAGTTATTATTTTGATACATACCTGGCCTC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCCCTCGTTGATCTATAGTTATTATTTTGATACATACCTGGCCTC  997

seq1  CTGAGGCTACTCCTATTTCTGTATTGATTTTGGTAAACAGGAGACTTGGG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCTACTCCTATTTCTGTATTGATTTTGGTAAACAGGAGACTTGGG  1047

seq1  AAGAGATTTTGCTCAAACAGCTGGAATTCATGAAGCTTCCTGGAATTC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATTTTGCTCAAACAGCTGGAATTCATGAAGCTTCCTGGAATTC  1095