BAC Information

Click to search

BAC

Clone NameB6Ng01-237G12
Chromosome15 (Build37)
Map Location 63,566,272 - 63,567,437
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040430, Tsg101-ps, EG239502, EG432959
Downstream geneLOC672194, Mlze, AI987692, Gsdmdc2, 9930109F21Rik, LOC665769, 9030605I04Rik, 4933426G20Rik, 0910001A06Rik, Ddef1, Adcy8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237G12.bB6Ng01-237G12.g
ACCGA048371GA048372
length1,1841,141
definitionB6Ng01-237G12.b B6Ng01-237G12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaataactcacttaaagaaatacaggagaacactgctaaagagtt
acaagtccttaaagaaaaacaggaaaacactgctaaagagttacaagtcc
ttaaagaaaaacaggaaaacacaaccaaacaggtagaagtccttatagaa
aaacaggaaaacacatccaaacaggtgatggaaatgaacaaaaccatact
agacctaaaaagggaagtagacacaataaagaaaacccaaagtgaggcga
cgctggagatagaaaccctaggaaagaaatctggaaccatagatgccagc
atcagcaacagaatacaagagatggaagagagaatctcaggtgcagaaga
ctccatagagaacatcggcacaacaatcaaagaaaatggaaaatgcaaaa
agatcctaactcaaaacatccaggaaatccaggacacaatgagaagacca
agcctacggataataggagtggatgagaatgaagattttcaactcaaagg
accagcaaacatcttcaacaaaattattgaagaaaacttcctaaatctaa
agaaagagatgcccatgaacatacaagaagcctacagaactccaaataga
ctggaccagaaaagaaattcctcccgacacataataatcagaacaccaaa
tgcactaaataaagatagaatactaaaagcagtaagggaaaaaggtcaag
taacatataaaggcaagcctatcagaattacaccagatttttcaccagag
actatgaaagccagaagagcctggacagatgttatacagacactaagaga
acacaaatgccagcccaggctactatacccagccaaactctcaattacca
tagatggagaaaccaaagtattccacgacaaaactaaatttcacccataa
tctctccacgaatccagcccttcaaaggataataacagaaaaaaaccaat
acaaggacgggaaccacgccctagaaaaacagagatatacctcaacaaac
ctaaagagacagccacagaacagaatgccaactttacacaaaaataacag
agcacattacctttccttatatctctatatcatgactcaattccccatga
agactagactaaagactgctacccgaacaggatcacattctgctgcctta
cagaagccattctcaggtaaaaaggacacggaac
gaattccattgcacgtatatcccacattttctttatctccacatctgttg
gcagatatctaggttggttccatttcttagctattgtgaatagtgccttt
atgaacacgagcgtgcatatatctctgcggtgggatgtagggttccttgg
gtatctttgagtggaaagaaagccatgagaacagaagcaccttcacggag
atcacacaaaactcaggactgaagctcgggttagagtttggagcctctta
ctgccttttaattcctgggttcccacatgtcacctccctgtcatttgatc
tctgtatttatttattcattgactaaatcagcctttcttcacgcatgctt
tctttaaatatttgctcaccagcatgtattagagatacaaaggtgcctga
caggtcctcagggcaatgataaggctgtggaggagatacctaagtgggag
gggctgagtggcatgggacatgggcacaggggagcgtcacagtgtgaata
cagagtgtttacctggaaagatggcatgggagacaagctttaaaagaggg
aaaggattgaatgtgttaatggaactagtgacaatttgctgtggagccat
aagcactatacttctgtagcaggatcaaggaagggcagaagtgaaagaaa
gccatgcattcttacaagtggctctttcaacaaagaagccagccacaatg
aatgtctccagaggccatccttggactgggcacagtagtgatgtcagaag
ggatgctggacccattcatttcttcaagggacttgccatctactgagggg
aaaacaggcatgtccacaaactgcccagcaggagcaacgggctgaggtgg
gggcctgagatccgcattattgacttgctctagcattttctcacctgaag
tctcaggcccttggctgtttttcatccgtgaatttgtgaagctagacaca
ctttcttgtttcagaagagaaaggcagtatccagccttgagtctttcttc
tagttgtgtgacatgaaaacaatttctttcatctgtcactgggagcatgt
gtgtatttatgaagcacagcaccttagggactactcctatatcatgacat
caaagtgtcatctagtcagctaagcaatatagtcatctgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_63566272_63567437
seq2: B6Ng01-237G12.g_67_1207 (reverse)

seq1  TCCAGATGAACTATATGGTTTTAGCTGAAAACAAAAAGAAAAGGACACTT  50
      |||||||| ||||||| |  |||||||         |  | | |||||||
seq2  TCCAGATG-ACTATATTG-CTTAGCTG---------ACTAGATGACACTT  39

seq1  TGATGGTCTATGATATAGGAGTTAGTCCCTAAAGGTGCCTGGTGCCTTTA  100
      |||| ||| |||||||||||| |||||||| |||||||   ||||  || 
seq2  TGAT-GTC-ATGATATAGGAG-TAGTCCCT-AAGGTGC--TGTGC--TTC  81

seq1  ATAAATAACACACATGCTCCCAGTGACAGATGAAAGAAATTGTTTTCATG  150
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAT-ACACACATGCTCCCAGTGACAGATGAAAGAAATTGTTTTCATG  130

seq1  TCACACAACTAAGAAAGAAAGACTCAAGGCTGGATACTGCCTTTTCTTCC  200
      |||||||||||   ||||||||||||||||||||||||||| |||||  |
seq2  TCACACAACTA--GAAGAAAGACTCAAGGCTGGATACTGCC-TTTCT--C  175

seq1  TTCTGAAACAAGAAAGTGTGTCTAGCTTCACAAATTCACGGATGAAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAACAAGAAAGTGTGTCTAGCTTCACAAATTCACGGATGAAAAAC  225

seq1  AGCCAAGGCCCTGAGACTTCAGGTGAGAAAATGCTAGAGCAAGTCAATAA  300
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAGGGCCTGAGACTTCAGGTGAGAAAATGCTAGAGCAAGTCAATAA  275

seq1  TGCGGATCTCAGGCCCCCACCTCAGCCCGTTGCTCCTGCTGGGCAGTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGATCTCAGGCCCCCACCTCAGCCCGTTGCTCCTGCTGGGCAGTTTG  325

seq1  TGGACATGCCTGTTTTCCCCTCAGTAGATGGCAAGTCCCTTGAAGAAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACATGCCTGTTTTCCCCTCAGTAGATGGCAAGTCCCTTGAAGAAATG  375

seq1  AATGGGTCCAGCATCCCTTCTGACATCACTACTGTGCCCAGTCCAAGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGTCCAGCATCCCTTCTGACATCACTACTGTGCCCAGTCCAAGGAT  425

seq1  GGCCTCTGGAGACATTCATTGTGGCTGGCTTCTTTGTTGAAAGAGCCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCTGGAGACATTCATTGTGGCTGGCTTCTTTGTTGAAAGAGCCACT  475

seq1  TGTAAGAATGCATGGCTTTCTTTCACTTCTGCCCTTCCTTGATCCTGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGAATGCATGGCTTTCTTTCACTTCTGCCCTTCCTTGATCCTGCTA  525

seq1  CAGAAGTATAGTGCTTATGGCTCCACAGCAAATTGTCACTAGTTCCATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTATAGTGCTTATGGCTCCACAGCAAATTGTCACTAGTTCCATTA  575

seq1  ACACATTCAATCCTTTCCCTCTTTTAAAGCTTGTCTCCCATGCCATCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTCAATCCTTTCCCTCTTTTAAAGCTTGTCTCCCATGCCATCTTT  625

seq1  CCAGGTAAACACTCTGTATTCACACTGTGACGCTCCCCTGTGCCCATGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTAAACACTCTGTATTCACACTGTGACGCTCCCCTGTGCCCATGTC  675

seq1  CCATGCCACTCAGCCCCTCCCACTTAGGTATCTCCTCCACAGCCTTATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCCACTCAGCCCCTCCCACTTAGGTATCTCCTCCACAGCCTTATCA  725

seq1  TTGCCCTGAGGACCTGTCAGGCACCTTTGTATCTCTAATACATGCTGGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCTGAGGACCTGTCAGGCACCTTTGTATCTCTAATACATGCTGGTG  775

seq1  AGCAAATATTTAAAGAAAGCATGCGTGAAGAAAGGCTGATTTAGTCAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATATTTAAAGAAAGCATGCGTGAAGAAAGGCTGATTTAGTCAATG  825

seq1  AATAAATAAATACAGAGATCAAATGACAGGGAGGTGACATGTGGGAACCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAAATACAGAGATCAAATGACAGGGAGGTGACATGTGGGAACCC  875

seq1  AGGAATTAAAAGGCAGTAAGAGGCTCCAAACTCTAACCCGAGCTTCAGTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTAAAAGGCAGTAAGAGGCTCCAAACTCTAACCCGAGCTTCAGTC  925

seq1  CTGAGTTTTGTGTGATCTCCGTGAAGGTGCTTCTGTTCTCATGGCTTTCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTTTGTGTGATCTCCGTGAAGGTGCTTCTGTTCTCATGGCTTTCT  975

seq1  TTCCACTCAAAGATACCCAAGGAACCCTACATCCCACCGCAGAGATATAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTCAAAGATACCCAAGGAACCCTACATCCCACCGCAGAGATATAT  1025

seq1  GCACGCTCGTGTTCATAAAGGCACTATTCACAATAGCTAAGAAATGGAAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGCTCGTGTTCATAAAGGCACTATTCACAATAGCTAAGAAATGGAAC  1075

seq1  CAACCTAGATATCTGCCAACAGATGTGGAGATAAAGAAAATGTGGGATAT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTAGATATCTGCCAACAGATGTGGAGATAAAGAAAATGTGGGATAT  1125

seq1  ACGTGCAATGGAATTC  1166
      ||||||||||||||||
seq2  ACGTGCAATGGAATTC  1141