BAC Information

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BAC

Clone NameB6Ng01-237P16
Chromosome15 (Build37)
Map Location 29,237,568 - 29,238,702
singlet/doubletsinglet
Overlap genenone
Upstream geneDnahc5, EG382974, LOC100040675, LOC100040689, LOC100040702, LOC667153
Downstream geneLOC382975, Ctnnd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237P16.bB6Ng01-237P16.g
ACCGA048795GA048796
length1,149349
definitionB6Ng01-237P16.b B6Ng01-237P16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagtaagttgcacacaaatgccttcactcacaagcaacttcaga
ggaactattgttttgttttgtgtgctttttgtttgtttgtctgtttgttt
gcttttaggtcaaacctattataaaatgagaatgtccttaaaaacgcttg
tatcaaaatgttctgtattttaaatatatcacattacaatgttcctaaaa
ctggaatgggtaaaatgccacctgttccaaatgtcccttaaatgttcctg
gggacagagcttggacaagaatatctgatcataaattttatgagtaagga
agccagaagcaaacatattactaggctgtgcaagtagcctgaaattttaa
agtcagagttctgcaaagatcataaatggctgattagacacaaagaagat
aaatgaagaggagtcacaataggtcagtacaggatcagataaaagagatc
aggtaaaagctatgtgatgatacacactgggaaagtgatattgcatgaat
caaacttggaagcaagtcatagtgttcaccacattatgagcccaccatag
ccacggggcttgcttttgcaaagaaaaaaaaaaacagaactgacaactca
taggttcaattcttgacttcaaaaagctgtgcattgatagactcaaccat
gtggatttggttgagcatgcctggtgaatggatcccacaagtataacaat
agatcagatagaagacatctacacagcaaactcgagagtagcatccatta
aagtcatctagtcttagtgaactgccaccttagtgtggacccatgatgga
gaaagcaaaagaaacaataaaagggaaaggagtagagagggagagaatag
gaggcacaggctactattgttgagagtacatcaaggctaatgcctttatg
ctctatagcaccatgattttaacccttttatagcatcaccatcatggaga
aaaagacccttaaaggccaagaagttatttttcagaaagaaatgagctag
gaggaggggcaaatcattttcttgtagcaacatttttctagcacatcgat
attgatcatagaatgattatgccacaattgacatcattagtcaaaactta
acacttcaaactactagaatgttatcctaggctctggatactctttttt

cacaggaagaccaacagagtcaactagcttggattcttggggctctcaga
gtctgaacaaccaaccagagtacacataggctggacctaggtgtccctgc
aaatatgtagcagaggtgcagcttggtcgtcatgtggatcttggataact
gggacaggggctatcccaaaagctgttgcctgtctgtggactatgttctt
gtacccaagctgccatgtctggtctttatggaagagaaagcacctagcct
cgcaatgacttgaagtgccagggtcctcaagggaatatgggggatcatga
ggggggcatctgctcagagtagaaggggatggggagatggagaaagatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_29237568_29238702
seq2: B6Ng01-237P16.b_48_1196

seq1  GAATTCTAGTAAGTTGCACACAAATGCCTTCACTCACAAGCAACTTCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTAAGTTGCACACAAATGCCTTCACTCACAAGCAACTTCAGA  50

seq1  GGAACTATTGTTTTGTTTTGTGTGCTTTTTGTTTGTTTGTCTGTTTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTATTGTTTTGTTTTGTGTGCTTTTTGTTTGTTTGTCTGTTTGTTT  100

seq1  GCTTTTAGGTCAAACCTATTATAAAATGAGAATGTCCTTAAAAACGCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTAGGTCAAACCTATTATAAAATGAGAATGTCCTTAAAAACGCTTG  150

seq1  TATCAAAATGTTCTGTATTTTAAATATATCACATTACAATGTTCCTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAATGTTCTGTATTTTAAATATATCACATTACAATGTTCCTAAAA  200

seq1  CTGGAATGGGTAAAATGCCACCTGTTCCAAATGTCCCTTAAATGTTCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATGGGTAAAATGCCACCTGTTCCAAATGTCCCTTAAATGTTCCTG  250

seq1  GGGACAGAGCTTGGACAAGAATATCTGATCATAAATTTTATGAGTAAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAGAGCTTGGACAAGAATATCTGATCATAAATTTTATGAGTAAGGA  300

seq1  AGCCAGAAGCAAACATATTACTAGGCTGTGCAAGTAGCCTGAAATTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAAGCAAACATATTACTAGGCTGTGCAAGTAGCCTGAAATTTTAA  350

seq1  AGTCAGAGTTCTGCAAAGATCATAAATGGCTGATTAGACACAAAGAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGAGTTCTGCAAAGATCATAAATGGCTGATTAGACACAAAGAAGAT  400

seq1  AAATGAAGAGGAGTCACAATAGGTCAGTACAGGATCAGATAAAAGAGATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAGAGGAGTCACAATAGGTCAGTACAGGATCAGATAAAAGAGATC  450

seq1  AGGTAAAAGCTATGTGATGATACACACTGGGAAAGTGATATTGCATGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAAAGCTATGTGATGATACACACTGGGAAAGTGATATTGCATGAAT  500

seq1  CAAACTTGGAAGCAAGTCATAGTGTTCACCACATTATGAGCCCACCATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTGGAAGCAAGTCATAGTGTTCACCACATTATGAGCCCACCATAG  550

seq1  CCACGGGGCTTGCTTTTGCAAAGAAAAAAAAAAACAGAACTGACAACTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGGGGCTTGCTTTTGCAAAGAAAAAAAAAAACAGAACTGACAACTCA  600

seq1  TAGGTTCAATTCTTGACTTCAAAAAGCTGTGCATTGATAGACTCAACCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTCAATTCTTGACTTCAAAAAGCTGTGCATTGATAGACTCAACCAT  650

seq1  GTGGATTTGGTTGAGCATGCCTGGTGAATGGATCCCACAAGTATAACAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATTTGGTTGAGCATGCCTGGTGAATGGATCCCACAAGTATAACAAT  700

seq1  AGATCAGATAGAAGACATCTACACAGCAAACTCGAGAGTAGCATCCATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGATAGAAGACATCTACACAGCAAACTCGAGAGTAGCATCCATTA  750

seq1  AAGTCATCTAGTCTTAGTGAACTGCCACCTTAGTGTGGACCCATGATGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCATCTAGTCTTAGTGAACTGCCACCTTAGTGTGGACCCATGATGGA  800

seq1  GAAAGCAAAAGAAACAATAAAAGGGAAAGGAGTAGAGAGGGAGAGAATAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAAAAGAAACAATAAAAGGGAAAGGAGTAGAGAGGGAGAGAATAG  850

seq1  GAGGCACAGGCTACTATTGTTGAGAGTACATCAAGGCTAATGCCTTTATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCACAGGCTACTATTGTTGAGAGTACATCAAGGCTAATGCCTTTATG  900

seq1  CTCTATAGCACCATGA-TTTAACCC-TTTATAGCATCACCATCATGGAGA  948
      |||||||||||||||| |||||||| ||||||||||||||||||||||||
seq2  CTCTATAGCACCATGATTTTAACCCTTTTATAGCATCACCATCATGGAGA  950

seq1  AAAAGACCC-TAAAGG-CAAG-AGTTA-TTCTCAGAAAGAAATGAGCTA-  993
      ||||||||| |||||| |||| ||||| || |||||||||||||||||| 
seq2  AAAAGACCCTTAAAGGCCAAGAAGTTATTTTTCAGAAAGAAATGAGCTAG  1000

seq1  GAGGAGGGGC-AATCA-TTTCTGTAAGCAACATTTCT-AAGCACATCGAT  1040
      |||||||||| ||||| |||||   |||||||||| |  |||||||||||
seq2  GAGGAGGGGCAAATCATTTTCTTGTAGCAACATTTTTCTAGCACATCGAT  1050

seq1  A-TGATCAATAGGAAATGA-TATGCCACAATTGACATCATTAGTCAAAAC  1088
      | ||||| ||||  ||||| ||||||||||||||||||||||||||||||
seq2  ATTGATC-ATAG--AATGATTATGCCACAATTGACATCATTAGTCAAAAC  1097

seq1  TAAACAC-TCAAACTACTAGGATG-TAT-CTA-GCTCT-GATACTCTTTT  1133
      | ||||| |||||||||||| ||| ||| ||| ||||| |||||||||||
seq2  TTAACACTTCAAACTACTAGAATGTTATCCTAGGCTCTGGATACTCTTTT  1147

seq1  TT  1135
      ||
seq2  TT  1149


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