BAC Information

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BAC

Clone NameB6Ng01-238D05
Chromosome15 (Build37)
Map Location 43,198,819 - 43,199,955
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039197, Angpt1, Rspo2, LOC675960, Eif3s6
Downstream geneTtc35, LOC100039288, Tmem74, LOC100039309, Trhr, LOC665041
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238D05.bB6Ng01-238D05.g
ACCGA048958GA048959
length1,1231,183
definitionB6Ng01-238D05.b B6Ng01-238D05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctatagttggatcttttattatatgaagaaaatgcacaatttaa
gccactattgtagggcttactattatttgcattaaaacttatgcctgact
gatccaaatgaaaggataaattgcttaaactgaagaggggttcatatgag
aggttgtaaagaagactagcatgtctactgtctcaaagaacttataaaat
aaaaggcaagggtcaagcactgtaatagacacagtgcatacattaagaga
atgtatgataagatggaggcaggatgcagtcatatttgatgtcagggaaa
atatggggatgttatatctcataacttgttacaggtttatgctgctttct
aataatgtcattattagtaattgaactattaataagatgatgactagaaa
ttaggtaaaatcacttgcttggttgtgctggtctaaatgttacactgttc
tcactggggtgtaatatttgtttagctgagctttggtactgaaattctgg
aaaacacttttaaaaagtccttctaattaaaaggtcattgtttttccaat
gaaattgactatagtgacctatttcttccccatggattaactactctttt
atagaatcaccccagaaccaccatatgctcttttaccaaaacatttacta
aactctgttgtagcctcccttctttcacagactgtctcatgcatttccta
gtgtcttcttaaccaggctatgcaatcagtaaaaattttgatatgaatat
attagtgaaggatagtaacttagcatgctctctcccttgatatttgtaca
ttaaatatcttgcttaaatatggtaaaccatggccctattttagaattat
catggaaatgttacaagataaccgagcccaagccttcccatccaacacca
cttaagtgtaactcactcatacacctaccactaaaccttcatcctatctc
tatatctgagtctattcttggctttcttgtgagccttgttgtcatgtctg
ctagaatggatcctaccacatttgagatgtgcattgtagctgcttctgca
actgcacagctgaaagctaggtccttttttttcctcatctgcattatata
gttgtagctgatgaattaatcta
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccaagagctaagggatctgcaaccctaa
tagtggaacacatatgagctaccagttaccccgagctcttgactctagct
gcatataatatcaaagaatggctagttcggtcatcactggaaaggagagg
ctcattggacttgctaaccttatatgccagttacagcgaaataccaggcc
aaaaagtggaatatggtgtcggctcgcaggcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_43198819_43199955
seq2: B6Ng01-238D05.b_48_1170

seq1  GAATTCCTATAGTTGGATCTTTTATTATATGAAGAAAATGCACAATTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATAGTTGGATCTTTTATTATATGAAGAAAATGCACAATTTAA  50

seq1  GCCACTATTGTAGGGCTTACTATTATTTGCATTAAAACTTATGCCTGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTATTGTAGGGCTTACTATTATTTGCATTAAAACTTATGCCTGACT  100

seq1  GATCCAAATGAAAGGATAAATTGCTTAAACTGAAGAGGGGTTCATATGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCAAATGAAAGGATAAATTGCTTAAACTGAAGAGGGGTTCATATGAG  150

seq1  AGGTTGTAAAGAAGACTAGCATGTCTACTGTCTCAAAGAACTTATAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGTAAAGAAGACTAGCATGTCTACTGTCTCAAAGAACTTATAAAAT  200

seq1  AAAAGGCAAGGGTCAAGCACTGTAATAGACACAGTGCATACATTAAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCAAGGGTCAAGCACTGTAATAGACACAGTGCATACATTAAGAGA  250

seq1  ATGTATGATAAGATGGAGGCAGGATGCAGTCATATTTGATGTCAGGGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGATAAGATGGAGGCAGGATGCAGTCATATTTGATGTCAGGGAAA  300

seq1  ATATGGGGATGTTATATCTCATAACTTGTTACAGGTTTATGCTGCTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGGGATGTTATATCTCATAACTTGTTACAGGTTTATGCTGCTTTCT  350

seq1  AATAATGTCATTATTAGTAATTGAACTATTAATAAGATGATGACTAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGTCATTATTAGTAATTGAACTATTAATAAGATGATGACTAGAAA  400

seq1  TTAGGTAAAATCACTTGCTTGGTTGTGCTGGTCTAAATGTTACACTGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTAAAATCACTTGCTTGGTTGTGCTGGTCTAAATGTTACACTGTTC  450

seq1  TCACTGGGGTGTAATATTTGTTTAGCTGAGCTTTGGTACTGAAATTCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGGGTGTAATATTTGTTTAGCTGAGCTTTGGTACTGAAATTCTGG  500

seq1  AAAACACTTTTAAAAAGTCCTTCTAATTAAAAGGTCATTGTTTTTCCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACTTTTAAAAAGTCCTTCTAATTAAAAGGTCATTGTTTTTCCAAT  550

seq1  GAAATTGACTATAGTGACCTATTTCTTCCCCATGGATTAACTACTCTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTGACTATAGTGACCTATTTCTTCCCCATGGATTAACTACTCTTTT  600

seq1  ATAGAATCACCCCAGAACCACCATATGCTCTTTTACCAAAACATTTACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATCACCCCAGAACCACCATATGCTCTTTTACCAAAACATTTACTA  650

seq1  AACTCTGTTGTAGCCTCCCTTCTTTCACAGACTGTCTCATGCATTTCCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGTTGTAGCCTCCCTTCTTTCACAGACTGTCTCATGCATTTCCTA  700

seq1  GTGTCTTCTTAACCAGGCTATGCAATCAGTAAAAATTTTGATATGAATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTCTTAACCAGGCTATGCAATCAGTAAAAATTTTGATATGAATAT  750

seq1  ATTAGTGAAGGATAGTAACTTAGCATGCTCTCTCCCTTGATATTTGTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTGAAGGATAGTAACTTAGCATGCTCTCTCCCTTGATATTTGTACA  800

seq1  TTAAATATCTTGCTTAAATATGGTAAACCATGGCCCTATTTTAGAATTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATATCTTGCTTAAATATGGTAAACCATGGCCCTATTTTAGAATTAT  850

seq1  CATGGAAATGTTACAAGATAACCGAGCCCAAGCCTTCCCATCCAACACCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAAATGTTACAAGATAACCGAGCCCAAGCCTTCCCATCCAACACCA  900

seq1  CTTAAGTGTAACTCACTCATACACCTAACCACTAAACCTTCATCCTATCT  950
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTTAAGTGTAACTCACTCATACACCT-ACCACTAAACCTTCATCCTATCT  949

seq1  CTATATCTGAGGTCTATTCTTGGCTTTCTTGTGGAGCCTTGTTGTCATTG  1000
      |||||||||| ||||||||||||||||||||| |||||||||||||| ||
seq2  CTATATCTGA-GTCTATTCTTGGCTTTCTTGT-GAGCCTTGTTGTCA-TG  996

seq1  TCTTGCTAGAATGGAATCCTACCCACATTTGAGATGTGCATTTGTAGGCT  1050
      || ||||||||||| |||||| |||||||||||||||||| ||||| |||
seq2  TC-TGCTAGAATGG-ATCCTA-CCACATTTGAGATGTGCA-TTGTA-GCT  1041

seq1  GCTTCTGCAACTGCACCAAGCTGGAGAGCTAGTTCC-TTTTTTTCCTC-T  1098
      ||||||||||||||||  |||| || |||||| ||| ||||||||||| |
seq2  GCTTCTGCAACTGCAC--AGCT-GAAAGCTAGGTCCTTTTTTTTCCTCAT  1088

seq1  CTGTCTTTTTTTTTTGTTGTTGTTGATGAATTATATCTA  1137
      |||     || | | ||||| | |||||||||| |||||
seq2  CTG---CATTATATAGTTGTAGCTGATGAATTA-ATCTA  1123