BAC Information

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BAC

Clone NameB6Ng01-238L12
Chromosome15 (Build37)
Map Location 61,680,978 - 61,681,688
singlet/doubletsinglet
Overlap genenone
Upstream geneA1bg, LOC100040323
Downstream geneMyc, Pvt1, LOC100040584, H2afy3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238L12.bB6Ng01-238L12.g
ACCGA049341GA049342
length575711
definitionB6Ng01-238L12.b B6Ng01-238L12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atactgttttccttttaaaaaaatgcatgcatatatagacacaacctgct
gagttcactgagtgttacttctgtgtgtgatttcagcactggtcagtctg
tagtagagcctcatttctgtggaagactaattctcccttctcagtaggca
ttagtttcctgtaggtaaccatttcagggtgggactcattgagatttcct
ccttccacattagcatgtctattggtgttgtccaggttcaggtagcaagg
ttgttgttgtagggtgtagctttcctgttatttctaagagatccaatctc
aggaatcttcctgggcttccggctgttagaatctatttgttctcccttct
gtactgttccctgagctgtatacacaggaattgccttgtagatgttttca
atggggcagtagagtctctgatcagttgctatctgattttactagttgta
gttttctgtagtggtctccatgtgctacagagcctctttgcctctttggc
gagggatgagaacttcatgtgtctgtggatattagggaaggttttggaat
gtagttaggaattaggctggtttag
gaattctcctgtactggggcatattatctttgcaagaccaagggactctc
ctcccaatgatggctgactagcaagtcctggatacaccattacacgggaa
aagcaagatttggatctaaaatcacttctcatgaatgattatcattaata
aggaccaatgaaacttgggctaccggttggtgaggggaaaggtggatatt
taggaagccaaggtcaaagtaaatggcagctgaaatgaagttctcaaaaa
tggaaccactaaacattagccagaataggactagagagttaaacatctga
ggcagagccaagaaggccaaccttaacatggacaaagaaagaagtatcaa
tgagggggaaaaattagtaagaaaaggggtgcttcagggtccccagtgaa
ggagctagagaccagtacccaaggagcggaaggattttgcagccccatag
gaggaacaacaatatgaactaaccagtacccccagagctccctgggacta
aaccaccaatcaaaaaacaaacaaacaaacaaacaaacaaacaaaaaaac
acatggtgggactcatggctctaactgcatatgtagcagagaatggccta
gtcagtcatcaatgggaggagaggcccttggtcctgtgaaggctctatgc
cccagtgtagaggggtgccagggccaggaatggggttgtagtgcaggggg
gcggggggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_61680978_61681688
seq2: B6Ng01-238L12.g_70_780

seq1  GAATTCTCCTGTACTGGGGCATATTATCTTTGCAAGACCAAGGGACTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGTACTGGGGCATATTATCTTTGCAAGACCAAGGGACTCTC  50

seq1  CTCCCAATGATGGCTGACTAGCAAGTCCTGGATACACCATTACACGGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAATGATGGCTGACTAGCAAGTCCTGGATACACCATTACACGGGAA  100

seq1  AAGCAAGATTTGGATCTAAAATCACTTCTCATGAATGATTATCATTAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGATTTGGATCTAAAATCACTTCTCATGAATGATTATCATTAATA  150

seq1  AGGACCAATGAAACTTGGGCTACCGGTTGGTGAGGGGAAAGGTGGATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCAATGAAACTTGGGCTACCGGTTGGTGAGGGGAAAGGTGGATATT  200

seq1  TAGGAAGCCAAGGTCAAAGTAAATGGCAGCTGAAATGAAGTTCTCAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGCCAAGGTCAAAGTAAATGGCAGCTGAAATGAAGTTCTCAAAAA  250

seq1  TGGAACCACTAAACATTAGCCAGAATAGGACTAGAGAGTTAAACATCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACCACTAAACATTAGCCAGAATAGGACTAGAGAGTTAAACATCTGA  300

seq1  GGCAGAGCCAAGAAGGCCAACCTTAACATGGACAAAGAAAGAAGTATCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGCCAAGAAGGCCAACCTTAACATGGACAAAGAAAGAAGTATCAA  350

seq1  TGAGGGGGAAAAATTAGTAAGAAAAGGGGTGCTTCAGGGTCCCCAGTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGGAAAAATTAGTAAGAAAAGGGGTGCTTCAGGGTCCCCAGTGAA  400

seq1  GGAGCTAGAGACCAGTACCCAAGGAGCGGAAGGATTTTGCAGCCCCATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTAGAGACCAGTACCCAAGGAGCGGAAGGATTTTGCAGCCCCATAG  450

seq1  GAGGAACAACAATATGAACTAACCAGTACCCCCAGAGCTCCCTGGGACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAACAACAATATGAACTAACCAGTACCCCCAGAGCTCCCTGGGACTA  500

seq1  AACCACCAATCAAAAAACAAACAAACAAACAAACAAACAAACAAAAAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCAATCAAAAAACAAACAAACAAACAAACAAACAAACAAAAAAAC  550

seq1  ACATGGTGGGACTCATGGCTCTAACTGCATATGTAGCAGAGAATGGCCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTGGGACTCATGGCTCTAACTGCATATGTAGCAGAGAATGGCCTA  600

seq1  GTCAGTCATCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGCTCTATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTCATCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGCTCTATGC  650

seq1  CCCAGTGTAGAGGGGTGCCAGGGCCAGGAATGGGGTTGTAGTGCAGGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGTAGAGGGGTGCCAGGGCCAGGAATGGGGTTGTAGTGCAGGGGG  700

seq1  GCGGGGGGAGG  711
      |||||||||||
seq2  GCGGGGGGAGG  711