BAC Information

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BAC

Clone NameB6Ng01-240C10
Chromosome15 (Build37)
Map Location 67,837,622 - 67,838,547
singlet/doubletsinglet
Overlap genenone
Upstream geneSt3gal1
Downstream geneZfat1, LOC100041000, EG665945, EG633752, Khdrbs3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240C10.bB6Ng01-240C10.g
ACCGA050394GA050395
length1,1721,193
definitionB6Ng01-240C10.b B6Ng01-240C10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttaattaggctgagttctgtttgctcttttatacttggggatt
gtttagaactgctttctgctttttgttctgctgctgcggctgctgctgct
ggaaacctgggggcactgagaagccctgggtaacggccaagacatggtga
tcctcctgtctctgcttcctaatatccctaaagacaggtgctatccacct
catctcttgtttttgggtggtggtggttggcaccgaattcttacctacct
gagtaccgagaccctgattctcccaccgaaggagaccctgcactgggtgg
tccgtggcatggaaccttgaccttgtgttaggttttactttgtaaacact
gacctgtgaaaactgtaaggtattccttcagacctatagctttgtgaaac
ttatttgttagactaactctgctgtagattttcttgcttcagtttcaggg
tctgcaccagtgagtccagtacaattgttacttccaggtttttaaagacc
aatcagggctttctcttctttcagctgacactgaactcataaggcagtgt
taaccctactcctgtcttgtttggtcagaattttagatctctgggccctg
ttccaatgctggtgtaatccacacagtgaattactaattctgccagtcct
ttgcctgggaaacctagaccccagccagaggctagaagctcatgtccacc
tcactcacctttctcacctccaaagccttgctccaatagcccagtcacag
tgctcattctctaagaagctcctaatcgttcagtacagagtcaaggatgt
tgtgccttctccgatccaggggaattatgagtctcacctgtgaatttacc
tcactcaggaatttcagtcctatgatgcctagtccctcacatagacattg
tgtgaccatttatgactgcaaggctaatttttactattcctagtagtagc
tcaacactggtctttttggtgatgggccttgttcttctatgctggctagc
tctttctaatgggaatgacgttgttctgcctttcatccctgctaatctca
aggaaatgaatctcaagtttctcatctttttaagaaatttgtttggattc
aaattcataaccaaaaaaatttgggcgtgctggtaaatagaaaatccact
ttaatgcattttaagtagaaag
gaattcactgtgttgtcaggctggcttttccgttcagatctgccttcctc
tgcttccctagtgctgggattaaaagtgcgccaccacactggggctgaga
ctgaccttcctctgtcctgtccctcggactttgttcttctgtcctgcccc
attcaaactgctgtacaatctgctaaccattgtgtggttggcctgaaaaa
ccccccaaatattgtaccccttgctcctctgttcgccctgacgccgagac
tagacaaactgcaaattcaccaaatctaaatgaaaaggaagacccctctg
ctcaaccccgaagaaagggggacccttgtccctcttacttgaatctctta
tactgctgctattggaaaatctaaggggagtgctggattttagccagaca
tataacttaccttgcttcttctaaagatcaatataattgtttacttagac
gaagagacgctacggaactgaaaccaatctataaaatcgcccacccacaa
cacattaaaaaacatggccaaatggcttttagcacatagaagtagatcga
tgacctcagcatagaacaggatttgctaaatctcataaagaagggagcgg
gaatagccttgaactcattggtacagtgactcttctccctgaacagaaca
tcatgctgtcaatgactgggagccggcatgttaattaaatgggacctcat
gacactgaaaagcttctgtaagacaaagaacattctcaagaggacaaaat
ggcagcctacagattgggaaaagatcttcaccaaccctacatatgacaga
gggctgatatccaaaatatatcaagaagttagacaccaacaaaccaatga
cccaatttaaaaatggggtatagatctaaacagaaaattctcaacaaagg
aatcttgagtggccaagaagcacttaaatgttcaaggtccttagtcatca
aaggacatgaaaaaacaaaatgactctgagattccagctcacactggtaa
gaatggctagatcaaaaactcaagtgataatctggacccttgtagctctc
agagactgaacatcagcaaatagcatacattgggctgtacttagagttcc
cacacatattgtaggcagatggtgagctaagtctcatgtgagttccctca
acaccttgaagttggggcctgttccactataaatttgttttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_67837622_67838547
seq2: B6Ng01-240C10.b_271_1213 (reverse)

seq1  CTTTCTACTTAAAATAC-TTAAATTG--ATTTCTATTT-CCTGCA---CC  43
      ||||||||||||||| | ||||| ||   ||||||||| || |||   ||
seq2  CTTTCTACTTAAAATGCATTAAAGTGGATTTTCTATTTACCAGCACGCCC  50

seq1  CAATTTTTTTGGTATTGAATTTGAAACCAAACAAA-TTCTT--AAAGATG  90
       ||||||||||||  |||||||||| ||||||||| |||||  |||||||
seq2  AAATTTTTTTGGTTATGAATTTGAATCCAAACAAATTTCTTAAAAAGATG  100

seq1  AG-AACTTGAGATTCA-TTCCCTGAGATTAGCA-GGATTGAAGGCAGAAA  137
      || ||||||||||||| |||| ||||||||||| ||||  ||||||| ||
seq2  AGAAACTTGAGATTCATTTCCTTGAGATTAGCAGGGATGAAAGGCAG-AA  149

seq1  CAACGTCATT-CCATTAGAAAGAGCTAGCCAGCATAGAAGAACAAGG-CC  185
      |||||||||| |||||||||||||||||||||||||||||||||||| ||
seq2  CAACGTCATTCCCATTAGAAAGAGCTAGCCAGCATAGAAGAACAAGGCCC  199

seq1  ATCACC-AAAAGACCAGTGTTGAGCTACTACTAGG-ATAGT-AAAATTAG  232
      |||||| |||||||||||||||||||||||||||| ||||| ||||||||
seq2  ATCACCAAAAAGACCAGTGTTGAGCTACTACTAGGAATAGTAAAAATTAG  249

seq1  CCTTGCAGTCATAAATGGTCACACAATGTCTATGTGAGGGACTAGGCATC  282
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCAGTCATAAATGGTCACACAATGTCTATGTGAGGGACTAGGCATC  299

seq1  ATAGGACTGAAATTCCTGAGTGAGGTAAATTCACAGGTGAGACTCATAAT  332
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGACTGAAATTCCTGAGTGAGGTAAATTCACAGGTGAGACTCATAAT  349

seq1  TCCCCTGGATCGGAGAAGGCACAACATCCTTGACTCTGTACTGAACGATT  382
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTGGATCGGAGAAGGCACAACATCCTTGACTCTGTACTGAACGATT  399

seq1  AGGAGCTTCTTAGAGAATGAGCACTGTGACTGGGCTATTGGAGCAAGGCT  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTTCTTAGAGAATGAGCACTGTGACTGGGCTATTGGAGCAAGGCT  449

seq1  TTGGAGGTGAGAAAGGTGAGTGAGGTGGACATGAGCTTCTAGCCTCTGGC  482
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGTGAGAAAGGTGAGTGAGGTGGACATGAGCTTCTAGCCTCTGGC  499

seq1  TGGGGTCTAGGTTTCCCAGGCAAAGGACTGGCAGAATTAGTAATTCACTG  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTCTAGGTTTCCCAGGCAAAGGACTGGCAGAATTAGTAATTCACTG  549

seq1  TGTGGATTACACCAGCATTGGAACAGGGCCCAGAGATCTAAAATTCTGAC  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGATTACACCAGCATTGGAACAGGGCCCAGAGATCTAAAATTCTGAC  599

seq1  CAAACAAGACAGGAGTAGGGTTAACACTGCCTTATGAGTTCAGTGTCAGC  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAGACAGGAGTAGGGTTAACACTGCCTTATGAGTTCAGTGTCAGC  649

seq1  TGAAAGAAGAGAAAGCCCTGATTGGTCTTTAAAAACCTGGAAGTAACAAT  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAAGAGAAAGCCCTGATTGGTCTTTAAAAACCTGGAAGTAACAAT  699

seq1  TGTACTGGACTCACTGGTGCAGACCCTGAAACTGAAGCAAGAAAATCTAC  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGGACTCACTGGTGCAGACCCTGAAACTGAAGCAAGAAAATCTAC  749

seq1  AGCAGAGTTAGTCTAACAAATAAGTTTCACAAAGCTATAGGTCTGAAGGA  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGTTAGTCTAACAAATAAGTTTCACAAAGCTATAGGTCTGAAGGA  799

seq1  ATACCTTACAGTTTTCACAGGTCAGTGTTTACAAAGTAAAACCTAACACA  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTTACAGTTTTCACAGGTCAGTGTTTACAAAGTAAAACCTAACACA  849

seq1  AGGTCAAGGTTCCATGCCACGGACCACCCAGTGCAGGGTCTCCTTCGGTG  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAGGTTCCATGCCACGGACCACCCAGTGCAGGGTCTCCTTCGGTG  899

seq1  GGAGAATCAGGGTCTCGGTACTCAGGTAGGTAAGAATTCGGTGC  926
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAATCAGGGTCTCGGTACTCAGGTAGGTAAGAATTCGGTGC  943