MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-241O18
Chromosome	15 (Build37)
Map Location	86,566,103 - 86,567,127
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Ppara, 2210021J22Rik, Pkdrej, AW124722, Gtse1, Trmu, Celsr1, BC021523, Cerk, LOC100042300, Tbc1d22a
Downstream gene	LOC100042309, AW049604
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ppara (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19013 MGI:104740
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2210021J22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72355 MGI:1919605
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pkdrej (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18766 MGI:1338786
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AW124722 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239570 MGI:2146198
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gtse1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:29870 MGI:1352755
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trmu (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72026 MGI:1919276
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Celsr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12614 MGI:1100883
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC021523 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:223752 MGI:2676308
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cerk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:223753 MGI:2386052
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042300 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042300
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 54 ESTs

name	Tbc1d22a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:223754 MGI:1289265
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042309 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042309
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein pseudo : _no_value

name	AW049604 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:106014 MGI:2146182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppara (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227253 GeneID:19013 MGI:104740
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peroxisome proliferator activated receptor alpha transcript_id : NM_011144.3

name	2210021J22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39930552 GeneID:72355 MGI:1919605
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2210021J22 gene transcript_id : NM_197998.1

name	Pkdrej (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115583674 GeneID:18766 MGI:1338786
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polycystic kidney disease (polycystin) and REJ (sperm receptor for egg jelly, sea urchin homolog)-like transcript_id : NM_011105.2

name	AW124722 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381878 GeneID:239570 MGI:2146198
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AW124722 transcript_id : NM_001033337.2

name	Gtse1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305118 GeneID:29870 MGI:1352755
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G two S phase expressed protein 1 transcript_id : NM_013882.1

name	Trmu (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130414 GeneID:72026 MGI:1919276
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase transcript_id : NM_028063.2

name	Celsr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115648152 GeneID:12614 MGI:1100883
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cadherin EGF LAG seven-pass G-type receptor 1 transcript_id : NM_009886.2

name	BC021523 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368891 GeneID:223752 MGI:2676308
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC021523 transcript_id : NM_172611.2

name	Cerk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62899060 GeneID:223753 MGI:2386052
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ceramide kinase transcript_id : NM_145475.3

name	LOC100042300 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266718 GeneID:100042300
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 54 ESTs product : hypothetical protein LOC100042300 transcript_id : XM_001477906.1

name	Tbc1d22a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42734462 GeneID:223754 MGI:1289265
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TBC1 domain family, member 22a transcript_id : NM_145476.2

name	AW049604 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54792125 GeneID:106014 MGI:2146182
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AW049604 transcript_id : NM_134096.2

name	Ppara (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543500 CCDS:CCDS27721.1 GeneID:19013 MGI:104740
definition	GO_component : GO:0005634 - nucleus [Evidence TAS] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence TAS]; GO:0004872 - receptor activity [Evidence IDA]; GO:0043565 - sequence-specific DNA binding [Evidence IDA] [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence TAS]; GO:0003700 - transcription factor activity [Evidence IMP] [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008544 - epidermis development [Evidence IMP]; GO:0006631 - fatty acid metabolism [Evidence IMP] [Evidence TAS]; GO:0006006 - glucose metabolism [Evidence TAS]; GO:0006629 - lipid metabolism [Evidence TAS]; GO:0045941 - positive regulation of transcription [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0019217 - regulation of fatty acid metabolism [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence TAS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : peroxisome proliferator activated receptor alpha protein_id : NP_035274.2

name	2210021J22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930553 CCDS:CCDS27722.1 GeneID:72355 MGI:1919605
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC72355 protein_id : NP_932115.1

name	Pkdrej (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115583675 CCDS:CCDS27723.1 GeneID:18766 MGI:1338786
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : receptor for egg jelly-like protein protein_id : NP_035235.2

name	AW124722 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701834 CCDS:CCDS27724.1 GeneID:239570 MGI:2146198
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC239570 protein_id : NP_001028509.1

name	Gtse1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305119 CCDS:CCDS27725.1 GeneID:29870 MGI:1352755
definition	GO_component : GO:0005874 - microtubule [Evidence IEA] codon_start : 1 function : p53 regulated microtubule localised protein product : G two S phase expressed protein 1 protein_id : NP_038910.1

name	Trmu (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312518 CCDS:CCDS27726.1 GeneID:72026 MGI:1919276
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004808 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity [Evidence IEA] GO_process : GO:0008033 - tRNA processing [Evidence IEA] codon_start : 1 product : tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 protein_id : NP_082339.1

name	Celsr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115648153 GeneID:12614 MGI:1100883
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence TAS] [Evidence IEA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA] [Evidence NAS]; GO:0046983 - protein dimerization activity [Evidence NAS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0045176 - apical protein localization [Evidence IMP]; GO:0007267 - cell-cell signaling [Evidence NAS]; GO:0007417 - central nervous system development [Evidence NAS]; GO:0007275 - development [Evidence IEA]; GO:0042249 - establishment of polarity of embryonic epithelium [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0010003 - gastrulation (sensu Mammalia) [Evidence NAS]; GO:0007156 - homophilic cell adhesion [Evidence IEA]; GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0007626 - locomotory behavior [Evidence IMP]; GO:0001843 - neural tube closure [Evidence IMP]; GO:0007218 - neuropeptide signaling pathway [Evidence IEA]; GO:0046928 - regulation of neurotransmitter secretion [Evidence NAS]; GO:0007165 - signal transduction [Evidence NAS] [Evidence IEA] codon_start : 1 note : seven-pass transmembrane receptor product : cadherin EGF LAG seven-pass G-type receptor 1 precursor protein_id : NP_034016.2

name	BC021523 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369870 CCDS:CCDS27727.1 GeneID:223752 MGI:2676308
definition	GO_component : GO:0009573 - ribulose bisphosphate carboxylase complex (sensu Magnoliophyta) [Evidence IEA] GO_function : GO:0016984 - ribulose-bisphosphate carboxylase activity [Evidence IEA] GO_process : GO:0015977 - carbon utilization by fixation of carbon dioxide [Evidence IEA] codon_start : 1 product : hypothetical protein LOC223752 protein_id : NP_766199.1

name	Cerk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62899061 CCDS:CCDS27728.1 GeneID:223753 MGI:2386052
definition	GO_component : GO:0000299 - integral to membrane of membrane fraction [Evidence ISS]; GO:0005624 - membrane fraction [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0004685 - calcium- and calmodulin-dependent protein kinase activity [Evidence ISS]; GO:0001729 - ceramide kinase activity [Evidence ISS]; GO:0004143 - diacylglycerol kinase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence ISS] [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006672 - ceramide metabolism [Evidence ISS]; GO:0007205 - protein kinase C activation [Evidence IEA] codon_start : 1 product : ceramide kinase protein_id : NP_663450.3

name	LOC100042300 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266719 GeneID:100042300
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477956.1

name	Tbc1d22a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42734463 CCDS:CCDS27729.1 GeneID:223754 MGI:1289265
definition	GO_function : GO:0005096 - GTPase activator activity [Evidence IEA] codon_start : 1 product : TBC1 domain family, member 22a protein_id : NP_663451.2

name	AW049604 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527326 GeneID:106014 MGI:2146182
definition	codon_start : 1 product : TAFA5 protein protein_id : NP_598857.1

name	LOC100042309 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149266720 GeneID:100042309
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : similar to H3 histone, family 3A pseudo : _no_value transcript_id : XR_033449.1

clone name	MSMg01-387O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003A17
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name		B6Ng01-241O18.g
ACC		GA051713
length		1,022
definition		B6Ng01-241O18.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence		gaattcagactttcagtgaaggttctccttgtagcacaaggccagggtcc tgactgggctgcattttctcactcttctgacatccactctatgaggtaga tgctagagagccttgatcttgggcatctcagccttcagagcagtgagaaa taaatttccttcatgtgttcattatttaatctgcagtgttctgtaacagc aacagaacagagcagagccaggcccattggtggaaacttgagttacagta actaagggaaccattctgtaagcatgcaagtgaattttcatagcaatggg ccaaggacctaggaatttccaggtgctgcgaagagctcagggctgtggat gagcaaaacttgccacagtagtctgaggtgcagtccccaggcaggcatct ctgaaaaacagagcagagtcctcccctactatacacatcctcatattcag gatggctgagattatggagacgggactgggagctgcatagagagggaaga agacccagccaggcctgtgcagtgaactaggtgagccaggatacaggaga ctatgcaaagatgcctaacctggaaatcatggggactggggactgtcagg gggttgattgtttctcctccaaattcttcttgaatatataaacacaagaa ttgcaaagtgaccctgtttggaagtagagttcaaatgaaatcatccagtg ggattcatgctatcatgaaaaagaagagacttagggctggcaaggtggct cagtggataaaagcacttgatgctcttacagggaaccagagtttggttcc cagcatccacaccagagatctgactccctcatcgggactccacagtcact tgcactcatgtgcatgtactcacacacagatgtgcacataatttggtcca tacacataattgaaaatttttaaaaggtggaacttgggctcagaatatac agaagggatggagtgtagagatggaatggagtgaggctacatctgtgaga tgtagatgctaactaaggagca
quality values		Open. Hide. 58 31 50 41 62 42 34 62 62 62 52 52 22 32 9 7 9 9 16 19 15 21 30 46 62 62 62 62 62 62 54 47 62 62 62 62 62 62 62 62 62 62 54 62 62 62 49 44 62 62 62 59 59 59 62 59 62 59 59 56 49 38 34 43 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 59 62 59 62 62 59 62 62 59 46 59 62 62 62 62 49 62 62 62 59 62 62 59 59 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 53 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 42 62 62 62 62 62 62 62 62 54 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 43 62 62 62 58 58 54 41 36 41 58 54 54 58 58 58 54 54 54 58 58 58 45 46 58 58 58 58 54 41 58 58 58 58 52 58 54 52 58 49 45 54 58 58 58 58 40 58 58 51 42 35 58 54 47 52 58 58 52 54 58 58 58 48 58 54 58 54 54 52 58 58 58 58 49 58 58 49 58 51 58 58 49 58 42 35 51 58 58 50 50 51 53 42 58 58 39 42 42 58 53 54 58 58 53 45 51 54 41 41 51 51 58 51 50 51 50 58 53 58 51 58 58 51 40 53 53 58 58 58 58 58 39 39 52 58 38 36 54 40 20 51 58 52 53 50 53 51 58 58 58 52 58 49 39 36 43 58 50 58 50 53 53 50 58 50 50 24 16 58 50 51 40 52 37 50 53 53 53 53 53 50 50 50 53 51 51 58 58 38 51 31 51 27 50 46 54 27 32 50 52 42 28 54 54 50 42 54 31 29 54 54 47 46 49 49 39 49 37 38 53 29 43 53 32 41 25 32 42 42 32 54 37 45 39 26 54 6 19 40 39 40 52 52 37 33 27 53 54 54 31 31 35 34 35 42 41 45 53 37 45 42 33 34 34 31 54 54 54 53 40 53 45 40 53 28 32 32 43 53 40 25 53 31 28 40 45 53 35 32 16 12 35 29 53 45 32 45 39 32 32 29 40 30 30 28 36 53 51 45 28 43 31 39 36 51 45 31 39 43 38 30 31 38 31 32 31 34 26 40 14 8 13 30 30 31 29 36 23 31 46 29 29 21 20 33 30 48 31 25 14 33 31 31 25 46 31 42 27 33 26 31 32 42 9 15 20 31 37 33 30 23 36 29 46 33 30 34 30 31 31 18 46 40 27 30 31 25 32 22 31 32 14 26 36 26 28 35 31 32 21 22 27 31 32 27 32 43 31 26 26 20 33 31 25 19 21 25 31 19 32 21 30 27 32 27 30 28 33 33 32 31 18 6 12 17 34 26 29 11 48 31 21 36 31 31 36 24 32 29 34 22 32 22 38 11 21 10 23 24 28 7 9 9 31 48 48 48 21 5 25 43 21 33 32 14 29 22 12 22 32 20 17 33 43 20 22 17 31 22 14 34 22 8 5 9 6 23 21 21 17 25 24 47 10 14 6 12 10 29 17 14 23 12 27 10 17 10 9 9 12 19 14 15 18 11 19 10 5 3 5 11 13 15 27 28 13 28 6 15 24 9 28 8 4 13 8 28 21 10 8 6 21 6 14 15 13 15 20 7 9 6 24 17 6 11 19 9 9 25

Alignment Information

BAC End 1

BAC End 2

seq1: chr15_86566103_86567127
seq2: B6Ng01-241O18.g_68_1089

seq1  GAATTCAGACTTTCAG-GAAGGTTCTCCTTGTAGCACAAGGCCAGGGTCC  49
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GAATTCAGACTTTCAGTGAAGGTTCTCCTTGTAGCACAAGGCCAGGGTCC  50

seq1  TGACTGGGCTGCATTTTCTCACTCTTCTGACATCCACTCTATGAGGTAGA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGGGCTGCATTTTCTCACTCTTCTGACATCCACTCTATGAGGTAGA  100

seq1  TGCTAGAGAGCCTTGATCTTGGGCATCTCAGCCTTCAGAGCAGTGAGAAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGAGAGCCTTGATCTTGGGCATCTCAGCCTTCAGAGCAGTGAGAAA  150

seq1  TAAATTTCCTTCATGTGTTCATTATTTAATCTGCAGTGTTCTGTAACAGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTCCTTCATGTGTTCATTATTTAATCTGCAGTGTTCTGTAACAGC  200

seq1  AACAGAACAGAGCAGAGCCAGGCCCATTGGTGGAAACTTGAGTTACAGTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAACAGAGCAGAGCCAGGCCCATTGGTGGAAACTTGAGTTACAGTA  250

seq1  ACTAAGGGAACCATTCTGTAAGCATGCAAGTGAATTTTCATAGCAATGGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGGGAACCATTCTGTAAGCATGCAAGTGAATTTTCATAGCAATGGG  300

seq1  CCAAGGACCTAGGAATTTCCAGGTGCTGCGAAGAGCTCAGGGCTGTGGAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGACCTAGGAATTTCCAGGTGCTGCGAAGAGCTCAGGGCTGTGGAT  350

seq1  GAGCAAAACTTGCCACAGTAGTCTGAGGTGCAGTCCCCAGGCAGGCATCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAAACTTGCCACAGTAGTCTGAGGTGCAGTCCCCAGGCAGGCATCT  400

seq1  CTGAAAAACAGAGCAGAGTCCTCCCCTACTATACACATCCTCATATTCAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAAACAGAGCAGAGTCCTCCCCTACTATACACATCCTCATATTCAG  450

seq1  GATGGCTGAGATTATGGAGACGGGACTGGGAGCTGCATAGAGAGGGAAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTGAGATTATGGAGACGGGACTGGGAGCTGCATAGAGAGGGAAGA  500

seq1  AGACCCAGCCAGGCCTGTGCAGTGAACTAGGTGAGCCAGGATACAGGAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCAGCCAGGCCTGTGCAGTGAACTAGGTGAGCCAGGATACAGGAGA  550

seq1  CTATGCAAAGATGCCTAACCTGGAAATCATGGGGACTGGGGACTGTCAGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCAAAGATGCCTAACCTGGAAATCATGGGGACTGGGGACTGTCAGG  600

seq1  GGGTTGATTGTTTCTCCTCCAAATTCTTCTTGAATATATAAACACAAGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGATTGTTTCTCCTCCAAATTCTTCTTGAATATATAAACACAAGAA  650

seq1  TTGCAAAGTGACCCTGTTTGGAAGTAGAGTTCAAATG-AATCATCCAGTG  698
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTGCAAAGTGACCCTGTTTGGAAGTAGAGTTCAAATGAAATCATCCAGTG  700

seq1  GGATTCATGCTATCATGAAAAAGAAGAGACTTAGGGCTGGCAAGGTGGCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCATGCTATCATGAAAAAGAAGAGACTTAGGGCTGGCAAGGTGGCT  750

seq1  CAGTGGATAAAAGCACTTGATGCTCTTACAGGGAACCAGAGTTTGGTTCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGATAAAAGCACTTGATGCTCTTACAGGGAACCAGAGTTTGGTTCC  800

seq1  CAGCATCCACACCAGAGATCTGACTCCCTCATCGGGACTCCACAGTCACT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCCACACCAGAGATCTGACTCCCTCATCGGGACTCCACAGTCACT  850

seq1  TGCACTCATGTGCATGTACTCACACACAGATGTGCACATAATTTGGTCCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTCATGTGCATGTACTCACACACAGATGTGCACATAATTTGGTCCA  900

seq1  TACACATAATTGATAATTTTTTAAAAGGTGGAACTTGGGCTCAG-ATATA  947
      ||||||||||||| || ||||||||||||||||||||||||||| |||||
seq2  TACACATAATTGA-AAATTTTTAAAAGGTGGAACTTGGGCTCAGAATATA  949

seq1  CAGAAGGGATGGAGTGTAGAGATGGAATGGAGGTTGAGGCTACATCTGTG  997
      ||||||||||||||||||||||||||||||||  ||||||||||||||||
seq2  CAGAAGGGATGGAGTGTAGAGATGGAATGGAG--TGAGGCTACATCTGTG  997

seq1  AGATGTAGGATGCTAAAACAAAGGAGCA  1025
      ||||||| ||||||  ||| ||||||||
seq2  AGATGTA-GATGCT--AACTAAGGAGCA  1022

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information