BAC Information

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BAC

Clone NameB6Ng01-243A18
Chromosome15 (Build37)
Map Location 26,132,965 - 26,134,130
singlet/doubletsinglet
Overlap genenone
Upstream gene4930445E18Rik, Basp1, EG432939, LOC100040583, Myo10, LOC100040602, Ppia-ps15_175.1, 1810015C04Rik, Zfp622
Downstream geneAK162044, Fbxl7, LOC622531, LOC625311
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243A18.bB6Ng01-243A18.g
ACCGA052535GA052536
length1,1861,178
definitionB6Ng01-243A18.b B6Ng01-243A18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccatatcttttaagggggttatttgatt
ttctggagtccaccctcttgagttctttatatatattggatattagtccc
ctatctgatttaagataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgactttgtcttttgccttgcagaagctttgcagtttca
tgaggtcccatttgtcaatcctcgatcttacagcacaagccattgctgtt
ctattcaggaattttttccctgtgcccatatcttcgagacttttccccat
tttatcctctataagtttcagtgtacctggttttatgtgaagttccttga
tccacttagatttgatcttagtacaaggagagaggaatggatcgattcgc
attcttctacatgataacaatcagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtcactataccaataccatgcagtttttataacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccatccagaggtactt
ttttccttgagaagagcttttgctatcctaggttttttattattccagat
gaatttgcagattgctctttataattcgttgaagaattgagttggaattt
tgatgggtattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttctttcttcagggacttgaagtttttatcat
acagatctttgacttccttaggtagagtcacaccaagatattttatatta
tttgtgactattgagaaggggtgttgttccctaatttctttctcagcctg
tttatctttgtgtagagaaagggccatggactggtttggagttaatttta
tatccagctacttcacgaagctgttatcagggttaaggagttcttctggt
tgaagttttaggatcacttatggatactatccatatcatctggaaagggt
gaatattcgacctccactcttttctcccagactata
gaattcaaccatgatggattatttagctctcttcctatctgccctggaaa
taccagcatttgctcaaatgaagtcaagaaggaacatggtttcattagct
tctttcaaaagggtgtcaatttctcattcctaggtttaagaaggtgaatt
ctcacactgtgtgaatgagagaagtccaatgacattatctaggtcacttc
acatgatgtctgggtctaaagtgaatttccgaattaattcttaatccatt
agttcctcctttatatcactcaggcttgttggtctcaaatgacatgttca
aggaacctatataaatccttaataactagtggtatcagacccaaacactt
taaaaataatttctatcagttgtgacttttatttctctccatccagttat
tacttcttctttcaggccttgccaaactcttaatcatggtggccacacca
tttgccttttctttacctttaagcagcactttcccccaggatataatttc
ccccttgcttatgtcatttgtcctgtcttagtgacaatattcctgcttct
atttaattattagcttttggataattttaaatactaaaaggaaagaaata
actatttgaattgatatttttacatcagaaattgtttttcctagtcaggt
atgaaacatgaatactgtcactttgttatatagttttatgtcagcttgat
gtaaactaatgtcacttgagaggaagacagttgagaaaatgcctccataa
gataagtctgtgggtgatcctgaagggcattttaattattggccaatggg
agaggatccagaacattgttggtggtgccatcccagggctggtgaatctg
ggtttctataaggaagcagcctgagcaagccagtaagcagcatgcctcca
tagactctacatcagcttctgattccatgatcctgctctgcttgatttcc
tgcccttactgccctccgatgaactggtggagtaaaaggaactcttttcc
tagtcaagtttgcttttgggttacactggtttcatcataggacagttaac
aggtactggagacaggtcacataacttatatggagagggtcaacattaaa
tgccatcggagcaggagattaatctattctacctgatgtctccattgata
gtaaaatttgggtgcctataaaatatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_26132965_26134130
seq2: B6Ng01-243A18.g_67_1244 (reverse)

seq1  CTATATTTTATAAGCA--CAAATTTTACTATC-ATGAAGACATCAAGTAA  47
      |||||||||||| |||  |||||||||||||| ||| |||||||| ||| 
seq2  CTATATTTTATAGGCACCCAAATTTTACTATCAATGGAGACATCAGGTAG  50

seq1  GATAGATAATACTCTTTGCTTCGGTGCAATTTAATGTTGA-CCTCTTCAT  96
       |||||| |  |||  |||| || ||  |||||||||||| ||||| |||
seq2  AATAGATTAATCTC-CTGCTCCGATGGCATTTAATGTTGACCCTCTCCAT  99

seq1  ATTAAAGTTATGTGA-CTGTCT-CAGTTACTGTT-ACTGTTCCTATGATG  143
      ||  ||||||||||| |||||| ||||  ||||| |||| ||||||||||
seq2  AT--AAGTTATGTGACCTGTCTCCAGTACCTGTTAACTG-TCCTATGATG  146

seq1  AAA-CAGTGTAACC--AAAGC-AACTTGACTAGG-AAAGAGTTCCTTTTA  188
      ||| ||||||||||  ||||| |||||||||||| |||||||||||||||
seq2  AAACCAGTGTAACCCAAAAGCAAACTTGACTAGGAAAAGAGTTCCTTTTA  196

seq1  CTC--ACAGTTCATCGGA-GGCAGTAAGGGCAGGAAATCAAGCAGAGCAG  235
      |||   |||||||||||| |||||||||||||||||||||||||||||||
seq2  CTCCACCAGTTCATCGGAGGGCAGTAAGGGCAGGAAATCAAGCAGAGCAG  246

seq1  GATCATGGAATCAGAAGCTGATGTAGAGTCTATGGAGGCATGCTGCTTAC  285
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATGGAATCAGAAGCTGATGTAGAGTCTATGGAGGCATGCTGCTTAC  296

seq1  TGGCTTGCTCAGGCTGCTTCCTTATAG-AACCCAGATTCACCAGCCCTGG  334
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGGCTTGCTCAGGCTGCTTCCTTATAGAAACCCAGATTCACCAGCCCTGG  346

seq1  GATGGCACCACCAACAATGTTCTGGATCCTCTCCCATTGGCCAATAATTA  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCACCACCAACAATGTTCTGGATCCTCTCCCATTGGCCAATAATTA  396

seq1  AAATGCCCTTCAGGATCACCCACAGACTTATCTTATGGAGGCATTTTCTC  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCCTTCAGGATCACCCACAGACTTATCTTATGGAGGCATTTTCTC  446

seq1  AACTGTCTTCCTCTCAAGTGACATTAGTTTACATCAAGCTGACATAAAAC  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTCTTCCTCTCAAGTGACATTAGTTTACATCAAGCTGACATAAAAC  496

seq1  TATATAACAAAGTGACAGTATTCATGTTTCATACCTGACTAGGAAAAACA  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAACAAAGTGACAGTATTCATGTTTCATACCTGACTAGGAAAAACA  546

seq1  ATTTCTGATGTAAAAATATCAATTCAAATAGTTATTTCTTTCCTTTTAGT  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGATGTAAAAATATCAATTCAAATAGTTATTTCTTTCCTTTTAGT  596

seq1  ATTTAAAATTATCCAAAAGCTAATAATTAAATAGAAGCAGGAATATTGTC  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAATTATCCAAAAGCTAATAATTAAATAGAAGCAGGAATATTGTC  646

seq1  ACTAAGACAGGACAAATGACATAAGCAAGGGGGAAATTATATCCTGGGGG  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGACAGGACAAATGACATAAGCAAGGGGGAAATTATATCCTGGGGG  696

seq1  AAAGTGCTGCTTAAAGGTAAAGAAAAGGCAAATGGTGTGGCCACCATGAT  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCTGCTTAAAGGTAAAGAAAAGGCAAATGGTGTGGCCACCATGAT  746

seq1  TAAGAGTTTGGCAAGGCCTGAAAGAAGAAGTAATAACTGGATGGAGAGAA  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGTTTGGCAAGGCCTGAAAGAAGAAGTAATAACTGGATGGAGAGAA  796

seq1  ATAAAAGTCACAACTGATAGAAATTATTTTTAAAGTGTTTGGGTCTGATA  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGTCACAACTGATAGAAATTATTTTTAAAGTGTTTGGGTCTGATA  846

seq1  CCACTAGTTATTAAGGATTTATATAGGTTCCTTGAACATGTCATTTGAGA  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTAGTTATTAAGGATTTATATAGGTTCCTTGAACATGTCATTTGAGA  896

seq1  CCAACAAGCCTGAGTGATATAAAGGAGGAACTAATGGATTAAGAATTAAT  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAAGCCTGAGTGATATAAAGGAGGAACTAATGGATTAAGAATTAAT  946

seq1  TCGGAAATTCACTTTAGACCCAGACATCATGTGAAGTGACCTAGATAATG  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGAAATTCACTTTAGACCCAGACATCATGTGAAGTGACCTAGATAATG  996

seq1  TCATTGGACTTCTCTCATTCACACAGTGTGAGAATTCACCTTCTTAAACC  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGGACTTCTCTCATTCACACAGTGTGAGAATTCACCTTCTTAAACC  1046

seq1  TAGGAATGAGAAATTGACACCCTTTTGAAAGAAGCTAATGAAACCATGTT  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAATGAGAAATTGACACCCTTTTGAAAGAAGCTAATGAAACCATGTT  1096

seq1  CCTTCTTGACTTCATTTGAGCAAATGCTGGTATTTCCAGGGCAGATAGGA  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTGACTTCATTTGAGCAAATGCTGGTATTTCCAGGGCAGATAGGA  1146

seq1  AGAGAGCTAAATAATCCATCATGGTTGAATTC  1166
      ||||||||||||||||||||||||||||||||
seq2  AGAGAGCTAAATAATCCATCATGGTTGAATTC  1178