BAC Information

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BAC

Clone NameB6Ng01-243G19
Chromosome15 (Build37)
Map Location 92,296,536 - 92,297,419
singlet/doubletsinglet
Overlap genePdzrn4
Upstream geneSlc2a13, Lrrk2, Muc19, Smgc, LOC100042529, Cntn1
Downstream geneLOC100042552, LOC100043283, Glt8d3, Yaf2, Zcrb1, Pphln1, LOC627623
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243G19.bB6Ng01-243G19.g
ACCGA052811GA052812
length1,214884
definitionB6Ng01-243G19.b B6Ng01-243G19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatggtgtctggtcaggtggggataaaaaatggactgtgattagc
aagaaatcagaaccactaaagtaaaacctttgccttgctggaacaattga
tagcaattaggtgcagctgagaaagtagtggtgattaagaagagaccgac
aacacagtgatgaaatcttctgggaagtgttttctcagggtccacacata
gaagtggtcttccagaggcagccaaagctgtaccttgtcctggcagtcaa
acttgggagtgttaagagtcatccaggtggtcctggttttgaaggcatga
aggggtcatggagagcagccgaggcttggcattgtgagaggccaggagtg
ggctttggtgaggaagccagctcagttagcattcgaagcgttggattgaa
ggggtcatggagagaatttaagggctggcaccaagaagagaaaccaggag
gtgcttctggtgaaactgcccagtggacatgccagtaccacaggatgatc
agcaagcagagccccagcagtggaggagtggagacagcagaagcctagga
gatgatctgtgtaggctgaggaaggtggccccgcagccctgcagtgcagc
cgagaagatcatgagtggatcctggacatcgatcggatgctaaggtattt
acagttagcgtttggttttgcttttgttcagattgtgcctgtgccctggt
tcttttcccttgaaacaagaacgtatttaacttattttgatgtttacagg
agaccacagttgagaggttttgaactcttaaagagattttggagttttaa
agagatctcgactttaaaagggactcacgtttctaaaatgactcaagttt
tccaagtgtttggctgttttacggctgtgggactttaaggttatgtggta
aaatacagtcatatttaatatgagatctcagttggacaaaaaaggtaaaa
ggttattgtagataggttgtggtggtgtgtcaagttgtacagttgtcttg
actagtcttgatgccaatttgacaactaggtagagagcaaggagcctcat
ttaaagaaacgttgcctcccaggatctggatgtaaggcaaggcctgtaag
gcatctcttattagattgtgaattgggaggctcagcccaattgtggttgg
gccatgaaatgggtcgtaacaggcgataagatcccatgctatatagggat
gcgtacttctctct
gaattcttatcagtgcagtgtattgttgttccaaattttaaattttgacc
ttattttttgatatcatctttgttctgtgcattcttagattatagatgat
tgcagggaaggctccctaatctccttcgcatgtgtgatggttagatggtt
aggaatatttctgtttgtttcaaaagaagcaaaaaaaaaaaaaaaaaaca
aaacaaaacaaaaaaaaaaaaacaaaaaaaaaactgtgagacaggaaaca
gacatcaaacctacagagactgtccccagtccttcactgagtaaaatctc
agcatttaaaatttttcctttgttcttttgtgtaccactggataactgta
tcaatgctttggtgaggattttgtttatggggtacaaaggaacatgacta
tacagcaatttcacaatctttataaaagttcagaggatagtaagaacaca
ggaggatatcatcctgacaggaaagggaattcaaggtgtactgtttattg
ggacagctctataatctcactttacacaatcaagaaacttctaaaccata
atcggaataaaagagtcctgagtataaaggtatactctctgaatgatggc
tctcaggcagtttcttccactgcagtagagcaaaagaaggcagagccaga
gaacagaggccagagtttagctctcaggcatcagtttaccacagctcatt
tctaaaagccatttgctgttaacatccacatttgctcagtgtcattattt
tctttaatgttctttaaatgttcagcaccagtctgtgatccagtttgttt
gtttatttaaatcacctttctcttcctaattataaaatacacagaatgtt
tcccatgacttgtgtggtggtgtggtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_92296536_92297419
seq2: B6Ng01-243G19.g_66_949

seq1  GAATTCTTATCAGTGCAGTGTATTGTTGTTCCAAATTTTAAATTTTGACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATCAGTGCAGTGTATTGTTGTTCCAAATTTTAAATTTTGACC  50

seq1  TTATTTTTTGATATCATCTTTGTTCTGTGCATTCTTAGATTATAGATGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTGATATCATCTTTGTTCTGTGCATTCTTAGATTATAGATGAT  100

seq1  TGCAGGGAAGGCTCCCTAATCTCCTTCGCATGTGTGATGGTTAGATGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGGAAGGCTCCCTAATCTCCTTCGCATGTGTGATGGTTAGATGGTT  150

seq1  AGGAATATTTCTGTTTGTTTCAAAAGAAGCAAAAAAAAAAAAAAAAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATATTTCTGTTTGTTTCAAAAGAAGCAAAAAAAAAAAAAAAAAACA  200

seq1  AAACAAAACAAAAAAAAAAAAACAAAAAAAAAACTGTGAGACAGGAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACAAAAAAAAAAAAACAAAAAAAAAACTGTGAGACAGGAAACA  250

seq1  GACATCAAACCTACAGAGACTGTCCCCAGTCCTTCACTGAGTAAAATCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCAAACCTACAGAGACTGTCCCCAGTCCTTCACTGAGTAAAATCTC  300

seq1  AGCATTTAAAATTTTTCCTTTGTTCTTTTGTGTACCACTGGATAACTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTAAAATTTTTCCTTTGTTCTTTTGTGTACCACTGGATAACTGTA  350

seq1  TCAATGCTTTGGTGAGGATTTTGTTTATGGGGTACAAAGGAACATGACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGCTTTGGTGAGGATTTTGTTTATGGGGTACAAAGGAACATGACTA  400

seq1  TACAGCAATTTCACAATCTTTATAAAAGTTCAGAGGATAGTAAGAACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCAATTTCACAATCTTTATAAAAGTTCAGAGGATAGTAAGAACACA  450

seq1  GGAGGATATCATCCTGACAGGAAAGGGAATTCAAGGTGTACTGTTTATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGATATCATCCTGACAGGAAAGGGAATTCAAGGTGTACTGTTTATTG  500

seq1  GGACAGCTCTATAATCTCACTTTACACAATCAAGAAACTTCTAAACCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCTCTATAATCTCACTTTACACAATCAAGAAACTTCTAAACCATA  550

seq1  ATCGGAATAAAAGAGTCCTGAGTATAAAGGTATACTCTCTGAATGATGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGAATAAAAGAGTCCTGAGTATAAAGGTATACTCTCTGAATGATGGC  600

seq1  TCTCAGGCAGTTTCTTCCACTGCAGTAGAGCAAAAGAAGGCAGAGCCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGCAGTTTCTTCCACTGCAGTAGAGCAAAAGAAGGCAGAGCCAGA  650

seq1  GAACAGAGGCCAGAGTTTAGCTCTCAGGCATCAGTTTACCACAGCTCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGAGGCCAGAGTTTAGCTCTCAGGCATCAGTTTACCACAGCTCATT  700

seq1  TCTAAAAGCCATTTGCTGTTAACATCCACATTTGCTCAGTGTCATTATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAAGCCATTTGCTGTTAACATCCACATTTGCTCAGTGTCATTATTT  750

seq1  TCTTTAATGTTCTTTAAATGTTCAGCACCAGTCTGTGATCCAGTTTGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAATGTTCTTTAAATGTTCAGCACCAGTCTGTGATCCAGTTTGTTT  800

seq1  GTTTATTTAAATCACCTTTCTCTTCCTAATTATAAAATACACAGAATGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTTAAATCACCTTTCTCTTCCTAATTATAAAATACACAGAATGTT  850

seq1  TCCCATGACTTGTGTGGTGGTGTGGTGTGTGTGT  884
      ||||||||||||||||||||||||||||||||||
seq2  TCCCATGACTTGTGTGGTGGTGTGGTGTGTGTGT  884