BAC Information

Click to search

BAC

Clone NameB6Ng01-243I12
Chromosome15 (Build37)
Map Location 23,537,207 - 23,538,377
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545091, Cdh18, LOC624863
Downstream geneLOC666989, LOC666999
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243I12.bB6Ng01-243I12.g
ACCGA052890GA052891
length1,1581,176
definitionB6Ng01-243I12.b B6Ng01-243I12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaatgaaatatacttctgggacctttatgttcttttcaggaat
gttttagaattgacaccatcaattttactggcttattcgcccatgaagcc
aaggcattattttaatcatgcatgattcaagagacactataccagcactc
attaccacagggaacaagaactacaaatgcccttgtctatagaatctgaa
cttaatttagcagatgcaagaggtgaaaaggaattataaagtagatttat
actcaaagaataaatcaggtcacactgttgaagggctattagattagctg
agatgaaatagaaattgtctcaaaataaatcaggtataatttgaaagcta
aaacaatctcttagtgaaagggcccaggagctgtgttattgttcttacat
tggagatggccaagagttaaggaagcattgcctaggggaggagcctgaaa
ctgggtgattgctgttatcttttccaattctgttacacaatcacacaaat
aaaattgtctttgagagaagctatgataacttagcaattagacattgttc
aaaagaatgctgctcttctcaaaacacctgtgtagtttataactgttatc
actagagatgcacttggaaagttccccagatatggatgtaaggactgctg
taatcaggaaatcccaagtacagatacaagatgggaattacacttttgaa
actgaatatgagagccatgctgtgacaaacttgtcaaagtgtcacatttc
tcttgagtgtgaagctcccctctaagcctaaaacccagagggaaagaaga
attttgaaaacttcccagggatcgagatcccatgttcccatttgctttca
tccttaattgagctcattttcaacccccatgtcttcggccataaaaagat
tatgagatcattttgtatccaaccacctactagtttcaatccctgggctt
acaaagtatactcgcatccagtggaaagctcctaccaatctgtgtctcag
tttgtagtattttacagtatattcatcaaagttaaatcttatttaaaata
tacctgatagctactgcccaaaacctgaaaatctgcatagcacagcaaag
ttgcatatttattctctcagtgattatgcaagaattgatgtaaagtcaat
tgcatatc
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatgggtgattgct
ttaatatgttcttggattcggctagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtgatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaaaagctttgcagaactgga
attagatcttctttgaaggtctgatagaactctgcactaaacccgtctgg
tcctgggctttttttggctgggagactattaataactgcttctatttctt
taggggatatgggactgtttagaaggtcaacttgatcctgattcaacttt
tgtacctggtatctgtccagaaatttgtccatttcgtccaggttttccag
ttttgttgagtatagccttttgtagaaggatctgatggtgttttggattt
cttcgggatctgttgttatgtctcccttttcatttctgattttgttaatt
aggattttgtccctgtcccctttagtgagtctagctaagggtttatctat
cttgttgattttctcaaagaaccaactcctcgtttggttaattctttgaa
taatttcttcttgtttccacttgggttgatttcacccctgagtttgatta
tttcctgccgtctactcctcttgggtgaatttgcttcatttttttctagg
gcttttagatgtgttgtcaagcttgctagtatgtgctctctcccgtttct
tcttggaggcacttcagagctatgagtttcctctagaaatgctttcatgt
gtccaagttggtacgttatggccttcatttcattaattcgaaaaggtctt
aattccttccttattcttctggactcaagggattcattgagagacgtgtt
ggtcaggttcccacgtgtaatgtgctcgctaatctaatttcctaactcga
gaatacagcctcttaatgggtcaccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_23537207_23538377
seq2: B6Ng01-243I12.b_45_1202 (reverse)

seq1  GATATGCATATGAATTTTACATCATATCTCTGCATAATCACTGAAGGAGA  50
      |||||||| ||  | |||||||||  ||| ||||||||||||||  ||||
seq2  GATATGCA-ATTGACTTTACATCAATTCT-TGCATAATCACTGA--GAGA  46

seq1  ATAAATATGCAAACTTTTGCTGTGCTATGCAGATTTTTCAAGTTTTGGGC  100
      ||||||||||||   |||||||||||||||||| |||||| |||||||||
seq2  ATAAATATGCAA--CTTTGCTGTGCTATGCAGA-TTTTCAGGTTTTGGGC  93

seq1  AGTAGCTATTCAGGTATATTTTAAATAAGATTTAAACTTTTGATGAATAA  150
      |||||||| ||||||||||||||||||||||||||   |||||||||| |
seq2  AGTAGCTA-TCAGGTATATTTTAAATAAGATTTAA--CTTTGATGAAT-A  139

seq1  TACTTGTTAAAATACTACAAACTGAAGACACAGATTGGTAGGAGCTTTCC  200
      ||||   ||||||||||||||||| |||||||||||||||||||||||||
seq2  TACT--GTAAAATACTACAAACTG-AGACACAGATTGGTAGGAGCTTTCC  186

seq1  ACTGGATGCGAGTATACTTTGTAAG-CCAGGGATTGAAACTAGTAGGTGG  249
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ACTGGATGCGAGTATACTTTGTAAGCCCAGGGATTGAAACTAGTAGGTGG  236

seq1  TTGGATACAAAATGATCTCATAATCTTTTTATGGCCGAAGACATGGGGGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATACAAAATGATCTCATAATCTTTTTATGGCCGAAGACATGGGGGT  286

seq1  TGAAAATGAGCTCAATTAAGGATGAAAGCAAATGGGAACATGGGATCTCG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATGAGCTCAATTAAGGATGAAAGCAAATGGGAACATGGGATCTCG  336

seq1  ATCCCTGGGAAGTTTTCAAAATTCTTCTTTCCCTCTGGGTTTTAGGCTTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTGGGAAGTTTTCAAAATTCTTCTTTCCCTCTGGGTTTTAGGCTTA  386

seq1  GAGGGGAGCTTCACACTCAAGAGAAATGTGACACTTTGACAAGTTTGTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGAGCTTCACACTCAAGAGAAATGTGACACTTTGACAAGTTTGTCA  436

seq1  CAGCATGGCTCTCATATTCAGTTTCAAAAGTGTAATTCCCATCTTGTATC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGGCTCTCATATTCAGTTTCAAAAGTGTAATTCCCATCTTGTATC  486

seq1  TGTACTTGGGATTTCCTGATTACAGCAGTCCTTACATCCATATCTGGGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTGGGATTTCCTGATTACAGCAGTCCTTACATCCATATCTGGGGA  536

seq1  ACTTTCCAAGTGCATCTCTAGTGATAACAGTTATAAACTACACAGGTGTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCAAGTGCATCTCTAGTGATAACAGTTATAAACTACACAGGTGTT  586

seq1  TTGAGAAGAGCAGCATTCTTTTGAACAATGTCTAATTGCTAAGTTATCAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAGAGCAGCATTCTTTTGAACAATGTCTAATTGCTAAGTTATCAT  636

seq1  AGCTTCTCTCAAAGACAATTTTATTTGTGTGATTGTGTAACAGAATTGGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTCTCAAAGACAATTTTATTTGTGTGATTGTGTAACAGAATTGGA  686

seq1  AAAGATAACAGCAATCACCCAGTTTCAGGCTCCTCCCCTAGGCAATGCTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAACAGCAATCACCCAGTTTCAGGCTCCTCCCCTAGGCAATGCTT  736

seq1  CCTTAACTCTTGGCCATCTCCAATGTAAGAACAATAACACAGCTCCTGGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAACTCTTGGCCATCTCCAATGTAAGAACAATAACACAGCTCCTGGG  786

seq1  CCCTTTCACTAAGAGATTGTTTTAGCTTTCAAATTATACCTGATTTATTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCACTAAGAGATTGTTTTAGCTTTCAAATTATACCTGATTTATTT  836

seq1  TGAGACAATTTCTATTTCATCTCAGCTAATCTAATAGCCCTTCAACAGTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAATTTCTATTTCATCTCAGCTAATCTAATAGCCCTTCAACAGTG  886

seq1  TGACCTGATTTATTCTTTGAGTATAAATCTACTTTATAATTCCTTTTCAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGATTTATTCTTTGAGTATAAATCTACTTTATAATTCCTTTTCAC  936

seq1  CTCTTGCATCTGCTAAATTAAGTTCAGATTCTATAGACAAGGGCATTTGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGCATCTGCTAAATTAAGTTCAGATTCTATAGACAAGGGCATTTGT  986

seq1  AGTTCTTGTTCCCTGTGGTAATGAGTGCTGGTATAGTGTCTCTTGAATCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTGTTCCCTGTGGTAATGAGTGCTGGTATAGTGTCTCTTGAATCA  1036

seq1  TGCATGATTAAAATAATGCCTTGGCTTCATGGGCGAATAAGCCAGTAAAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGATTAAAATAATGCCTTGGCTTCATGGGCGAATAAGCCAGTAAAA  1086

seq1  TTGATGGTGTCAATTCTAAAACATTCCTGAAAAGAACATAAAGGTCCCAG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGGTGTCAATTCTAAAACATTCCTGAAAAGAACATAAAGGTCCCAG  1136

seq1  AAGTATATTTCATTCTGAATTC  1171
      ||||||||||||||||||||||
seq2  AAGTATATTTCATTCTGAATTC  1158