BAC Information

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BAC

Clone NameB6Ng01-244H02
Chromosome15 (Build37)
Map Location 56,283,001 - 56,284,095
singlet/doubletsinglet
Overlap genenone
Upstream geneCol14a1, Mrpl13, Mtbp, Sntb1, LOC665348, LOC100039908, Hba-ps3
Downstream geneHas2, EG594843, LOC435442, LOC100040067, LOC100039984, BC026439
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244H02.bB6Ng01-244H02.g
ACCGA053577GA053578
length1,0971,163
definitionB6Ng01-244H02.b B6Ng01-244H02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacattttgactcataaaacctgaaatagcattcatctttagact
tacacatctaagcacatgattattcataatagcaataactaataaataac
agaaattatattttaagaagtctgttttgacttctaagtgccctgaaaag
gaaaaaagaaaaagaaaaaaaaaatcctcctgaatttaggtatcttccct
ccacaacaagcaagagaacactcacagaacacaagacaatcaaaaacttg
tacttatctccaggaaaattcagaaagaaagagtttactaaaatcacaat
gctacatcagttccctctgaaagtgagcacggtggtctgtgggtacagct
gcagttccccgagatcgaattccagggtcagttcttcaggaacgggaagc
aggaagcaaaggaagcagaaaaccaaattagtcagattcatcgggataaa
aactcacattgagttttctgcctgtcctccatagctgtgggtaataagga
cacaatgcatgaaggcagataaatcctcacattcatgagagctgtgtgac
aggtgtttcccagctcggggacaccagagccctgcagaaatctggggtaa
atgagaagagctaaaaataataattgcatggctcttttccactgtctaga
tggctagattacaaagctccagctggtcctctcttctagcactcacccac
acttacagcattgtgtactcggtccagatcaccaaggtcctcagactgag
gctttattttgatgctggtgtcaaatgagtgatatcatgtacacactgtc
ctgtccaacgctatttcttcattttctcctcttgcccttacatcctctcc
cttctccattctaccacctcatgaccttttccttcctgtcctcacattcg
ttgggcatctcatgggaggttagataatattgtcatcacattttatagat
acagattgagattagaataatttttatagctggccccagatctagggaag
gagaaaaattgaactgctgaaatccatcttcagggtgtatgtttaacctg
tagtgggcccccttctttggaagctcttgattcctttaaaagtgtta
gaattctgaactgaagaatactgaataactgagaagcacctaaaaaatgt
tcaacatccttagtcgtcagggaaatgcaaataaaaacaaccctgagatt
ccacctcacaccaattagaatagctaagatcaaaactcaggtgacaacag
atgctggtgagactgtggagaaaaaggaacactcttccattgctgttatg
attgcaagctagaaaatccactctggaaatcagtctggtggttcctcaga
aaattggacatagtactaccagaagatcctgcaataccactcctgggcat
atacccagaagatgctccaacatttaataaggacacatgctccactatgt
tcatagcagccttatttataatagccagaagctggaaagaacccagatgt
ccttcaacttaggaaaggatatggaaaatgtagtacatttacacaacgga
gtactagtcatctattaaaaacaatgaattcatgaaattcttagataaac
agagatttttcaatacaagaaactcaaatgactgacaaatccttaaagaa
atattcagcatccctaaccatcagaaaaatttaaatcaaaactactttga
gattctttgagatactttgagaacttatacctgtcagaatggctaatatc
aatagcaatggtacagcttattctggtaagtatatggaagaaggggaata
ctaattcagtactggttgaactgtaaacttgtaaggccactatggaaatc
aattgatttatctcaaggtccagcgatccactctttgtcatatacctaaa
gaatgtttcattgtaccacttgctcaaccatacttattgctgccttattc
acaaaaccccaaaactgtaaacaacctagatgtttcttaacacaagaatg
gttaaagaaaatgtacatttagacaatgaagtaggcctgtttaaaaaata
acactatgaagtttgcagctaaattaatgggaactagaaaaaaaaaatca
atctgagttaaggtaacctcatacaccgaaaaaataaatatggtaataat
atttagtatatgtggcttatagtcataaataacgataccaagcctacatc
atagtccgaaggttagtatagaggacgactagcgaatacatttccttggg
gagagagaaaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_56283001_56284095
seq2: B6Ng01-244H02.b_45_1141

seq1  GAATTCACATTTTGACTCATAAAACCTGAAATAGCATTCATCTTTAGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATTTTGACTCATAAAACCTGAAATAGCATTCATCTTTAGACT  50

seq1  TACACATCTAAGCACATGATTATTCATAATAGCAATAACTAATAAATAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATCTAAGCACATGATTATTCATAATAGCAATAACTAATAAATAAC  100

seq1  AGAAATTATATTTTAAGAAGTCTGTTTTGACTTCTAAGTGCCCTGAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTATATTTTAAGAAGTCTGTTTTGACTTCTAAGTGCCCTGAAAAG  150

seq1  GAAAAAAGAAAAAGAAAAAAAAAATCCTCCTGAATTTAGGTATCTTCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAGAAAAAGAAAAAAAAAATCCTCCTGAATTTAGGTATCTTCCCT  200

seq1  CCACAACAAGCAAGAGAACACTCACAGAACACAAGACAATCAAAAACTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAACAAGCAAGAGAACACTCACAGAACACAAGACAATCAAAAACTTG  250

seq1  TACTTATCTCCAGGAAAATTCAGAAAGAAAGAGTTTACTAAAATCACAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTATCTCCAGGAAAATTCAGAAAGAAAGAGTTTACTAAAATCACAAT  300

seq1  GCTACATCAGTTCCCTCTGAAAGTGAGCACGGTGGTCTGTGGGTACAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACATCAGTTCCCTCTGAAAGTGAGCACGGTGGTCTGTGGGTACAGCT  350

seq1  GCAGTTCCCCGAGATCGAATTCCAGGGTCAGTTCTTCAGGAACGGGAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTCCCCGAGATCGAATTCCAGGGTCAGTTCTTCAGGAACGGGAAGC  400

seq1  AGGAAGCAAAGGAAGCAGAAAACCAAATTAGTCAGATTCATCGGGATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCAAAGGAAGCAGAAAACCAAATTAGTCAGATTCATCGGGATAAA  450

seq1  AACTCACATTGAGTTTTCTGCCTGTCCTCCATAGCTGTGGGTAATAAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACATTGAGTTTTCTGCCTGTCCTCCATAGCTGTGGGTAATAAGGA  500

seq1  CACAATGCATGAAGGCAGATAAATCCTCACATTCATGAGAGCTGTGTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGCATGAAGGCAGATAAATCCTCACATTCATGAGAGCTGTGTGAC  550

seq1  AGGTGTTTCCCAGCTCGGGGACACCAGAGCCCTGCAGAAATCTGGGGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTTTCCCAGCTCGGGGACACCAGAGCCCTGCAGAAATCTGGGGTAA  600

seq1  ATGAGAAGAGCTAAAAATAATAATTGCATGGCTCTTTTCCACTGTCTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAGAGCTAAAAATAATAATTGCATGGCTCTTTTCCACTGTCTAGA  650

seq1  TGGCTAGATTACAAAGCTCCAGCTGGTCCTCTCTTCTAGCACTCACCCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAGATTACAAAGCTCCAGCTGGTCCTCTCTTCTAGCACTCACCCAC  700

seq1  ACTTACAGCATTGTGTACTCGGTCCAGATCACCAAGGTCCTCAGACTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACAGCATTGTGTACTCGGTCCAGATCACCAAGGTCCTCAGACTGAG  750

seq1  GCTTTATTTTGATGCTGGTGTCAAATGAGTGATATCATGTACACACTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATTTTGATGCTGGTGTCAAATGAGTGATATCATGTACACACTGTC  800

seq1  CTGTCCAACGCTATTTCTTCATTTTCCTCCTCTTGCCCTTACATCCTCTC  850
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTGTCCAACGCTATTTCTTCATTTT-CTCCTCTTGCCCTTACATCCTCTC  849

seq1  CCTTCTCCATTCTACCACCTCATGACCTTTTCCTTCCTGTCCTCACATTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCCATTCTACCACCTCATGACCTTTTCCTTCCTGTCCTCACATTC  899

seq1  GTTGGGCATCTCAT-GGAGGTTAGATAATATTGTCATCACATTTTATAGA  949
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTTGGGCATCTCATGGGAGGTTAGATAATATTGTCATCACATTTTATAGA  949

seq1  TACAGATTGAGATTAG-ATAATTTTTATAGCTGGCCCAAGATCTAGG--A  996
      |||||||||||||||| |||||||||||||||||||| |||||||||  |
seq2  TACAGATTGAGATTAGAATAATTTTTATAGCTGGCCCCAGATCTAGGGAA  999

seq1  AGAG-AAAATTGAACTGCTGAAATCCATCTTCAGGGTGTATTGTTTACCC  1045
       ||| ||||||||||||||||||||||||||||||||||| |||||| ||
seq2  GGAGAAAAATTGAACTGCTGAAATCCATCTTCAGGGTGTA-TGTTTAACC  1048

seq1  TGTAGTGGGGCCCC-TCTTTGGAGGCTTCCTTGATCCTTTAAAAAGTGTT  1094
      ||||||||| |||| |||||||| |||  |||||| | || |||||||||
seq2  TGTAGTGGGCCCCCTTCTTTGGAAGCT--CTTGATTCCTTTAAAAGTGTT  1096

seq1  A  1095
      |
seq2  A  1097