BAC Information

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BAC

Clone NameB6Ng01-244I15
Chromosome15 (Build37)
Map Location 25,250,990 - 25,347,746
singlet/doubletdoublet
Overlap gene4930445E18Rik, Basp1, EG432939, LOC100040583
Upstream geneLOC666999, LOC100040492, LOC100040499, LOC100040529, 9230109A22Rik
Downstream geneMyo10, LOC100040602, Ppia-ps15_175.1, 1810015C04Rik, Zfp622, AK162044
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244I15.bB6Ng01-244I15.g
ACCGA053647GA053648
length1,0921,135
definitionB6Ng01-244I15.b B6Ng01-244I15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,250,990 - 25,252,087)(25,346,625 - 25,347,746)
sequence
gaattcaacttatcatggtcaagtactgggaaggaacttaaagtaatttg
accgcttgggtatttccaggttctttttggttataaagttaagcagtgta
tttagtactcattagagctatttacacatattcaaactactgtattcagg
gactcgtggccaaattgtgttttctgggattcatacagtgatgtatgtcc
tgtgatgaatcctggctaaggcataatgtaagagcactccctttctgagg
aggctactagttcatgtcttcaattacctatagttgaaaaggctttttaa
gttttaagaactagccagtcagagataatacactgtgttcattaagtatc
cagcatttgagctacggtagagaaggtgcctcgggctgacagttttaagt
tctagcaaatctatcgagccatttgtccagcctgtaaagtctggtaaatt
ctggtataaaattagtaaagtctgaatctggggagaggaggaagtaaatg
gctcaaagagaactagaatcaagaaagcgataacaagctgtcagcaagaa
taaggcccaggcaagactgagaaaacagacttccccattcaagacaaaag
gaagcaacacaagcagcctgagaccctgtagggaagcattaactagacct
accttcagcagagtccctggctacaccaagacactggacaacagcactac
agaagtcggagctccccatggtcagcataacctatgaaggtggcattaga
ctgtggtccattgaaaatctcaatgatgcagagacatatgtcccgtagct
tgtagagacagttaaatatatgttttagcgatcaaagaggcaagattgct
taataattggcttaataaaaaaggctttcattccctaactatgccaagta
aatgaagtgttggaatatcaaatgaattctctgcaattatatgttatata
ctgagaaaacagaactgcttttagaaccaagagttacctagattgagaaa
ttctagcacaagacaggaacctctttctcacttttcccttggggtgttgc
cagagaactgcagagaaaaagcctgaaagagcaaggtcatgg
gaattcaaattcctcagtggcgatctttggccttgttcttgaagcaaccc
gcctggtttctgttgcagaggttgaagccccccccaccccccactccccg
ggctcctaaagggagctatgaggagtctgacctaagtttgtctgtgatac
cctgtggatgacaatcgaacaaaggcagcttgcactgcatgcagcactac
ggaaaacaaacaaataaaaaaataaataaataaacaaagaaaacaaataa
agaacaaaacctaaaccaaaccaaaccaaaccaccaccaccaccaccacc
accaccaccaccaccaccaccaccaccaatcaccacccctgccgctgcca
ccaccaccactatcaaagtcaacttgccttctccaactcaatagaatcac
atactcaattttcaaccagaagttctcagcctcttcattcttaacacgac
tgatattttgggctggagactcctctcctgagggactctcccttggcttc
taccacccagataccaaccagttccatctcacacgacaacccgataacat
tgccaaatgttgtctgggaagcaagacaactcgcagcactgttcacacca
aggaaaccctttccttgggctacatgacactgggattggagagggggaag
gaaaaaaaaagacacatagatcttgatatttttccctttgaagaaaatct
tgatatttggggaaagagcaggttgatgtataacattaatcttttgttta
taatctgtaggtgagatctgttggttctgtggccattttttttaatgtta
gtagagtggaatatactttcaaaatgggtctttgggggattttgggtcac
ccccagtgacttgagtgggcagacactgtgggtctctcttcattcattat
tatttttattggtgaactgaagggtgaacagacgctcggccttggtggga
agaaggtaggcaaggactcagaggttaagacaggaaggtgagacgagcct
cttattctacctaacttcaatgttcggtggtttaactggtaatgcaagcc
ccagctttagaagcagaatatagtggggtgaacatcttttttagtgaaca
gggggcatatgctgctaaacgttgtgcaagtcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_25250990_25252087
seq2: B6Ng01-244I15.b_44_1135

seq1  GAATTCAACTTATCATGGTCAAGTACTGGGAAGGAACTTAAAGTAATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTTATCATGGTCAAGTACTGGGAAGGAACTTAAAGTAATTTG  50

seq1  ACCGCTTGGGTATTTCCAGGTTCTTTTTGGTTATAAAGTTAAGCAGTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGCTTGGGTATTTCCAGGTTCTTTTTGGTTATAAAGTTAAGCAGTGTA  100

seq1  TTTAGTACTCATTAGAGCTATTTACACATATTCAAACTACTGTATTCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTACTCATTAGAGCTATTTACACATATTCAAACTACTGTATTCAGG  150

seq1  GACTCGTGGCCAAATTGTGTTTTCTGGGATTCATACAGTGATGTATGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCGTGGCCAAATTGTGTTTTCTGGGATTCATACAGTGATGTATGTCC  200

seq1  TGTGATGAATCCTGGCTAAGGCATAATGTAAGAGCACTCCCTTTCTGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGAATCCTGGCTAAGGCATAATGTAAGAGCACTCCCTTTCTGAGG  250

seq1  AGGCTACTAGTTCATGTCTTCAATTACCTATAGTTGAAAAGGCTTTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTACTAGTTCATGTCTTCAATTACCTATAGTTGAAAAGGCTTTTTAA  300

seq1  GTTTTAAGAACTAGCCAGTCAGAGATAATACACTGTGTTCATTAAGTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAGAACTAGCCAGTCAGAGATAATACACTGTGTTCATTAAGTATC  350

seq1  CAGCATTTGAGCTACGGTAGAGAAGGTGCCTCGGGCTGACAGTTTTAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTTGAGCTACGGTAGAGAAGGTGCCTCGGGCTGACAGTTTTAAGT  400

seq1  TCTAGCAAATCTATCGAGCCATTTGTCCAGCCTGTAAAGTCTGGTAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCAAATCTATCGAGCCATTTGTCCAGCCTGTAAAGTCTGGTAAATT  450

seq1  CTGGTATAAAATTAGTAAAGTCTGAATCTGGGGAGAGGAGGAAGTAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTATAAAATTAGTAAAGTCTGAATCTGGGGAGAGGAGGAAGTAAATG  500

seq1  GCTCAAAGAGAACTAGAATCAAGAAAGCGATAACAAGCTGTCAGCAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAAGAGAACTAGAATCAAGAAAGCGATAACAAGCTGTCAGCAAGAA  550

seq1  TAAGGCCCAGGCAAGACTGAGAAAACAGACTTCCCCATTCAAGACAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCCCAGGCAAGACTGAGAAAACAGACTTCCCCATTCAAGACAAAAG  600

seq1  GAAGCAACACAAGCAGCCTGAGACCCTGTAGGGAAGCATTAACTAGACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAACACAAGCAGCCTGAGACCCTGTAGGGAAGCATTAACTAGACCT  650

seq1  ACCTTCAGCAGAGTCCCTGGCTACACCAAGACACTGGACAACAGCACTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCAGCAGAGTCCCTGGCTACACCAAGACACTGGACAACAGCACTAC  700

seq1  AGAAGTCGGAGCTCCCCATGGTCAGCATAACCTATGAAGGTGGCATTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTCGGAGCTCCCCATGGTCAGCATAACCTATGAAGGTGGCATTAGA  750

seq1  CTGTGGTCCATTGAAAATCTCAATGATGCAGAGACATATGTCCCGTAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTCCATTGAAAATCTCAATGATGCAGAGACATATGTCCCGTAGCT  800

seq1  TGTAGAGACAGTTAAATATATGTTTTAGCGATCAAAGAGGCAAGATTGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAGACAGTTAAATATATGTTTTAGCGATCAAAGAGGCAAGATTGCT  850

seq1  TAATAATTGGCTTAAT-AAAAAGGCTTTCATTCCCTAACTATGCCAAGTA  899
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TAATAATTGGCTTAATAAAAAAGGCTTTCATTCCCTAACTATGCCAAGTA  900

seq1  AATGAAGTGTTGGAATATCAAATGAATTCTCTGCCAATTATATGTTATAT  949
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AATGAAGTGTTGGAATATCAAATGAATTCTCTG-CAATTATATGTTATAT  949

seq1  ACTGAGAAAACAGAACTGCTTTTAGAACCAAGAGTTACCAAGATTGAGGA  999
      ||||||||||||||||||||||||||||||||||||||| ||||||| ||
seq2  ACTGAGAAAACAGAACTGCTTTTAGAACCAAGAGTTACCTAGATTGA-GA  998

seq1  AATTCTAGCAACCAAGACAGGAACCTCCTTTCTTCACTTTTCCCCTTGGG  1049
      ||||||||||  |||||||||||||| ||||| |||||||| ||||||||
seq2  AATTCTAGCA--CAAGACAGGAACCT-CTTTC-TCACTTTT-CCCTTGGG  1043

seq1  GTGTTGCCAAGAGACCTGCA-AGAGACAAGCTGAAAGAGCAAAGTCATGG  1098
      |||||||| ||||| ||||| ||| | |  |||||||||||| |||||||
seq2  GTGTTGCC-AGAGAACTGCAGAGAAAAAGCCTGAAAGAGCAAGGTCATGG  1092

seq1: chr15_25346625_25347746
seq2: B6Ng01-244I15.g_67_1201 (reverse)

seq1  AATGACTTGCCACAAAACTGTTTGCAGCATAAGGCCCCCTG-TCACT-AA  48
      |||||||||   || |||  || ||||||| | |||||||| ||||| ||
seq2  AATGACTTG---CACAACGTTTAGCAGCAT-ATGCCCCCTGTTCACTAAA  46

seq1  AAAGATG-TCACCCCA-TATATTCTGCTCTTAAACCTGGGGCCTGCATTA  96
      ||||||| |||||||| |||||||||||  |||| ||||||| |||||||
seq2  AAAGATGTTCACCCCACTATATTCTGCTTCTAAAGCTGGGGCTTGCATTA  96

seq1  CCAGTTAAACCACCG-ACATTG-AGTTAGGTAGA--TAGA-GCTCGTCTC  141
      ||||||||||||||| |||||| |||||||||||   ||| |||||||||
seq2  CCAGTTAAACCACCGAACATTGAAGTTAGGTAGAATAAGAGGCTCGTCTC  146

seq1  ACCTTCCTGTCTT-ACCTCTGAGTCCTTGCCCTACCT--CTCCCACCAAG  188
      ||||||||||||| ||||||||||||||| |||||||   ||||||||||
seq2  ACCTTCCTGTCTTAACCTCTGAGTCCTTG-CCTACCTTCTTCCCACCAAG  195

seq1  GCCGAGCGTCTG-TCACCC-TCAGTTCACCCAATAAAATAAT-ATGAATG  235
      |||||||||||| |||||| |||||||||| |  |||||||| |||||||
seq2  GCCGAGCGTCTGTTCACCCTTCAGTTCACCAATAAAAATAATAATGAATG  245

seq1  AAGAGAGA-CCACAGTGTCTGCCCACTCAAGTCACT-GGGGTGACCCAAA  283
      |||||||| ||||||||||||||||||||||||||| |||||||||||||
seq2  AAGAGAGACCCACAGTGTCTGCCCACTCAAGTCACTGGGGGTGACCCAAA  295

seq1  --TCCCCAAAGACCCATTTTGAAAGTATATTCCACTCTACTAACATTTAA  331
         |||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATCCCCCAAAGACCCATTTTGAAAGTATATTCCACTCTACTAACA-TTAA  344

seq1  AAAAAATGGCCACAGAACCAACAGATCTCACCTACAGATTATAAACAAAA  381
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATGGCCACAGAACCAACAGATCTCACCTACAGATTATAAACAAAA  394

seq1  GATTAATGTTATACATCAACCTGCTCTTTCCCCAAATATCAAGATTTTCT  431
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATGTTATACATCAACCTGCTCTTTCCCCAAATATCAAGATTTTCT  444

seq1  TCAAAGGGAAAAATATCAAGATCTATGTGTCTTTTTTTTTCCTTCCCCCT  481
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGGAAAAATATCAAGATCTATGTGTCTTTTTTTTTCCTTCCCCCT  494

seq1  CTCCAATCCCAGTGTCATGTAGCCCAAGGAAAGGGTTTCCTTGGTGTGAA  531
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAATCCCAGTGTCATGTAGCCCAAGGAAAGGGTTTCCTTGGTGTGAA  544

seq1  CAGTGCTGCGAGTTGTCTTGCTTCCCAGACAACATTTGGCAATGTTATCG  581
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTGCGAGTTGTCTTGCTTCCCAGACAACATTTGGCAATGTTATCG  594

seq1  GGTTGTCGTGTGAGATGGAACTGGTTGGTATCTGGGTGGTAGAAGCCAAG  631
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTCGTGTGAGATGGAACTGGTTGGTATCTGGGTGGTAGAAGCCAAG  644

seq1  GGAGAGTCCCTCAGGAGAGGAGTCTCCAGCCCAAAATATCAGTCGTGTTA  681
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGTCCCTCAGGAGAGGAGTCTCCAGCCCAAAATATCAGTCGTGTTA  694

seq1  AGAATGAAGAGGCTGAGAACTTCTGGTTGAAAATTGAGTATGTGATTCTA  731
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAAGAGGCTGAGAACTTCTGGTTGAAAATTGAGTATGTGATTCTA  744

seq1  TTGAGTTGGAGAAGGCAAGTTGACTTTGATAGTGGTGGTGGTGGCAGCGG  781
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTGGAGAAGGCAAGTTGACTTTGATAGTGGTGGTGGTGGCAGCGG  794

seq1  CAGGGGTGGTGATTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGT  831
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGTGGTGATTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGT  844

seq1  GGTGGTGGTGGTTTGGTTTGGTTTGGTTTAGGTTTTGTTCTTTATTTGTT  881
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTGGTGGTTTGGTTTGGTTTGGTTTAGGTTTTGTTCTTTATTTGTT  894

seq1  TTCTTTGTTTATTTATTTATTTTTTTATTTGTTTGTTTTCCGTAGTGCTG  931
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGTTTATTTATTTATTTTTTTATTTGTTTGTTTTCCGTAGTGCTG  944

seq1  CATGCAGTGCAAGCTGCCTTTGTTCGATTGTCATCCACAGGGTATCACAG  981
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGTGCAAGCTGCCTTTGTTCGATTGTCATCCACAGGGTATCACAG  994

seq1  ACAAACTTAGGTCAGACTCCTCATAGCTCCCTTTAGGAGCCCGGGGAGTG  1031
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTTAGGTCAGACTCCTCATAGCTCCCTTTAGGAGCCCGGGGAGTG  1044

seq1  GGGGGTGGGGGGGGCTTCAACCTCTGCAACAGAAACCAGGCGGGTTGCTT  1081
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTGGGGGGGGCTTCAACCTCTGCAACAGAAACCAGGCGGGTTGCTT  1094

seq1  CAAGAACAAGGCCAAAGATCGCCACTGAGGAATTTGAATTC  1122
      |||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACAAGGCCAAAGATCGCCACTGAGGAATTTGAATTC  1135