BAC Information

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BAC

Clone NameB6Ng01-245L09
Chromosome15 (Build37)
Map Location 99,731,045 - 99,732,081
singlet/doubletsinglet
Overlap genenone
Upstream geneLmbr1l, Tuba1b, Tuba1a, EG668092, Tuba1c, Prph1, Troap, C1ql4, 2810451A06Rik, Spats2, Kcnh3, Mcrs1, EG545136, Prpf40b, Fmnl3, Tegt, C230021P08Rik, 4930556P03Rik, Faim2, LOC545137, Aqp2, Aqp5, Aqp6, Racgap1, LOC100043473, Accn2, Smarcd1, Gpd1, 2310016M24Rik, Lass5, Lima1, LOC100043481, LOC100042918
Downstream gene1700030F18Rik, Gm920, D330037H05Rik, 4930478M13Rik, Dip2b, Atf1, 4930478A21Rik, EG432981, Mettl7a, ENSMUSG00000058057, LOC554292, Ubie, Yghl1-4, Slc11a2, EG432982, Letmd1, BC035295, Tcfcp2, Pou6f1, Dazap2, BC004728, Bin2, Ela1, Galnt6, Slc4a8, Scn8a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245L09.g
ACCGA054527
length1,057
definitionB6Ng01-245L09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgtctcaaaaaccacacacacaaaaaagaatgtttctgtcctt
tgactatggagagactgcctttccactgacagtgtagctactactgttgc
tctgtttgtatgtgctgttattattagttattattattactaattctatt
gaatgtttgggtgggtgttgtgtctgcatagatgtctgttcaccaagtac
atgcagttcccaaggaggccagaaaaaggggtcttctgggaccgcaatta
taaatggctgccgtgtgaatataggaaacagaacccaggccctctggaag
agcagccagtgctcttaaccactgagccatccatctctccagcactgagc
ctttgtttcttattatattttatcttatatgtggatgtgtgcttgccaca
gcccacacgtggagagcagaggtcagttctttcccaccaagtggctcctg
gggactacatttggctcggcagcaagtgcctctacctgctgagccatcgc
tggactgcagagagcgttcatgacctgctttaggggtgaggaacgaaggg
aaggtttcctgtgtccgctgtgcccctgaataccaaggtgtcatatctgg
gggtccagtgtaggtcctctcagtgctcccgtgtgttcagcggcagcttg
cgtgcatgtccaagctgcctcagtcctcctcagatgtgctttgtcctctc
cgtgttcaccttaccaaaaccttatatagtaaaataaggttttatttcta
ttattttaaatcatgtataggtatatgtgtctacatatgggtatgtgccc
gtggagaccagaggcattgaatgccctggagctgcggttacaaaaggccg
tgagccacccgagggggctgggcacctgaactctgtccctctggaagagc
agcaagttgctctttagccacggagccatctcttcagccccagactgttc
ttttttctttcttgtgggtggtttgaattaagtttgcgcagggggaggtg
tccactatttagaaaggtgttggtcttgtttgggaatagatggtgtcttt
gggcgga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_99731045_99732081
seq2: B6Ng01-245L09.g_71_1127

seq1  GAATTCCTGTCTCAAAAACCACACACACAAAAAAGAATGTTTCTGTCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTCTCAAAAACCACACACACAAAAAAGAATGTTTCTGTCCTT  50

seq1  TGACTATGGAGAGACTGCCTTTCCACTGACAGTGTAGCTACTACTGTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTATGGAGAGACTGCCTTTCCACTGACAGTGTAGCTACTACTGTTGC  100

seq1  TCTGTTTGTATGTGCTGTTATTATTAGTTATTATTATTACTAATTCTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTGTATGTGCTGTTATTATTAGTTATTATTATTACTAATTCTATT  150

seq1  GAATGTTTGGGTGGGTGTTGTGTCTGCATAGATGTCTGTTCACCAAGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTTTGGGTGGGTGTTGTGTCTGCATAGATGTCTGTTCACCAAGTAC  200

seq1  ATGCAGTTCCCAAGGAGGCCAGAAAAAGGGGTCTTCTGGGACCGCAATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTTCCCAAGGAGGCCAGAAAAAGGGGTCTTCTGGGACCGCAATTA  250

seq1  TAAATGGCTGCCGTGTGAATATAGGAAACAGAACCCAGGCCCTCTGGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGCTGCCGTGTGAATATAGGAAACAGAACCCAGGCCCTCTGGAAG  300

seq1  AGCAGCCAGTGCTCTTAACCACTGAGCCATCCATCTCTCCAGCACTGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCAGTGCTCTTAACCACTGAGCCATCCATCTCTCCAGCACTGAGC  350

seq1  CTTTGTTTCTTATTATATTTTATCTTATATGTGGATGTGTGCTTGCCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTTCTTATTATATTTTATCTTATATGTGGATGTGTGCTTGCCACA  400

seq1  GCCCACACGTGGAGAGCAGAGGTCAGTTCTTTCCCACCAAGTGGCTCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACACGTGGAGAGCAGAGGTCAGTTCTTTCCCACCAAGTGGCTCCTG  450

seq1  GGGACTACATTTGGCTCGGCAGCAAGTGCCTCTACCTGCTGAGCCATCGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTACATTTGGCTCGGCAGCAAGTGCCTCTACCTGCTGAGCCATCGC  500

seq1  TGGACTGCAGAGAGCGTTCATGACCTGCTTTAGGGGTGAGGAACGAAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGCAGAGAGCGTTCATGACCTGCTTTAGGGGTGAGGAACGAAGGG  550

seq1  AAGGTTTCCTGTGTCCGCTGTGCCCCTGAATACCAAGGTGTCATATCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTCCTGTGTCCGCTGTGCCCCTGAATACCAAGGTGTCATATCTGG  600

seq1  GGGTCCAGTGTAGGTCCTCTCAGTGCTCCCGTGTGTTCAGCGGCAGCTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCAGTGTAGGTCCTCTCAGTGCTCCCGTGTGTTCAGCGGCAGCTTG  650

seq1  CGTGCATGTCCAAGCTGCCTCAGTCCTCCTCAGATGTGCTTTGTCCTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCATGTCCAAGCTGCCTCAGTCCTCCTCAGATGTGCTTTGTCCTCTC  700

seq1  CGTGTTCACCTTACCAAAACCTTATATAGTAAAATAAGGTTTTATTTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTTCACCTTACCAAAACCTTATATAGTAAAATAAGGTTTTATTTCTA  750

seq1  TTATTTTAAATCATGTATAGGTATATGTGTCTACATATGGGTATGTGCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTAAATCATGTATAGGTATATGTGTCTACATATGGGTATGTGCCC  800

seq1  GTGGAGACCAGAGGCATTGAATGCCCTGGAGCTGCGGTTACAAAAGGCCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGACCAGAGGCATTGAATGCCCTGGAGCTGCGGTTACAAAAGGCCG  850

seq1  TGAGCCACCCGAGGGGGCTGGGCA-CTGAACTCTGGTCCTCTGGAAGAGC  899
      |||||||||||||||||||||||| ||||||||||  |||||||||||||
seq2  TGAGCCACCCGAGGGGGCTGGGCACCTGAACTCTGTCCCTCTGGAAGAGC  900

seq1  AGCAAG-TGCTC-TTAGCCACGGAGCCATCTCTCCAG-CCCAGACTGT--  944
      |||||| ||||| |||||||||||||||||||| ||| ||||||||||  
seq2  AGCAAGTTGCTCTTTAGCCACGGAGCCATCTCTTCAGCCCCAGACTGTTC  950

seq1  CTTTTTCTTTC-TGT-GGTGGTTTGAA-TAAGTTTG-GCAAGGG--AGTG  988
       |||||||||| ||| ||||||||||| |||||||| ||| |||   |||
seq2  TTTTTTCTTTCTTGTGGGTGGTTTGAATTAAGTTTGCGCAGGGGGAGGTG  1000

seq1  T-CACTA-TTAG-AAGGTG-TGGCCTTGTT--GGAATAGAT-GTGTCTTT  1031
      | ||||| |||| |||||| ||| ||||||  ||||||||| ||||||||
seq2  TCCACTATTTAGAAAGGTGTTGGTCTTGTTTGGGAATAGATGGTGTCTTT  1050

seq1  -GGCGGA  1037
       ||||||
seq2  GGGCGGA  1057