BAC Information

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BAC

Clone NameB6Ng01-247A10
Chromosome15 (Build37)
Map Location 66,953,340 - 66,953,872
singlet/doubletsinglet
Overlap geneSt3gal1
Upstream geneKcnq3, Lrrc6, LOC100040860, Tmem71, LOC100040881, Phf20l1, Tg, Sla, Wisp1, Ndrg1, LOC100040667
Downstream geneZfat1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247A10.bB6Ng01-247A10.g
ACCGA055475GA055476
length1,202529
definitionB6Ng01-247A10.b B6Ng01-247A10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactaggcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagacgtagctgtctcttgtgagactatgcccggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacagggctccc
aatgggaggagctagagaaagtacccaaggagctaaaggggatcttcaac
cctatagtggaacaacattatgactaaccagtacccctgagctcttgact
ctagctgcatatgtatcaaagatgggctagttcgcatcactggcaagaag
agtcccattggaacaccgcagacttgttgtgccctggttacagggcaacg
cagctacggggtagctgggctcggttaaaggaccatcgtcgactctagat
aa
acttgctccagtatggaacgttttataagagttaagctaaaagaccggct
aagcagcatggctgcagagcccatgttctttctgctgggtctcttcttgg
ggtagagcagcttcctgtccaaggaagtccatgtgacaaagggagggtca
tcccacccagtcctgcacctctccaagtaaccacagatgctatcctctcc
gtctacgtgaggaagcatgtgtggaggagagaagtgtcctgaactagtcc
cagttacggctggaggtacagcaggagcagacctaggcaagtaggcattt
gataagactttcccatgtcccccaccatgcagctggtcctgaatatgggg
gaggggtgagagggctgtactgcgcatccctcgatgcctatccaaggacc
tcttcatagggaactctttagttttaagagcatccatcacgttttggtcc
atttgctttaaaatatacaggtgccgtttttatcttcttctaacatctga
ggtgaaaggccggtctgagaaagtatggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_66953340_66953872
seq2: B6Ng01-247A10.g_66_600

seq1  GAATTCACTTGCTCCAGTATGGAACGTTTTATAAGAGTTAAGCTAAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGCTCCAGTATGGAACGTTTTATAAGAGTTAAGCTAAAAGA  50

seq1  CCGGCTAAGCAGCATGGCTGCAGAGCCCATGTTCTTTCTGCTGGGTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCTAAGCAGCATGGCTGCAGAGCCCATGTTCTTTCTGCTGGGTCTCT  100

seq1  TCTTGGGGTAGAGCAGCTTCCTGTCCAAGGAAGTCCATGTGACAAAGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGGTAGAGCAGCTTCCTGTCCAAGGAAGTCCATGTGACAAAGGGA  150

seq1  GGGTCATCCCACCCAGTCCTGCACCTCTCCAAGTAACCACAGATGCTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCATCCCACCCAGTCCTGCACCTCTCCAAGTAACCACAGATGCTATC  200

seq1  CTCTCCGTCTACGTGAGGAAGCATGTGTGGAGGAGAGAAGTGTCCTGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCGTCTACGTGAGGAAGCATGTGTGGAGGAGAGAAGTGTCCTGAAC  250

seq1  TAGTCCCAGTTACGGCTGGAGGTACAGCAGGAGCAGACCTAGGCAAGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCCAGTTACGGCTGGAGGTACAGCAGGAGCAGACCTAGGCAAGTAG  300

seq1  GCATTTGATAAGACTTTCCCATGTCCCCCACCATGCAGCTGGTCCTGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGATAAGACTTTCCCATGTCCCCCACCATGCAGCTGGTCCTGAAT  350

seq1  ATGGGGGAGGGGTGAGAGGGCTGTACTGCGCATCCCTCGATGCCTATCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGGAGGGGTGAGAGGGCTGTACTGCGCATCCCTCGATGCCTATCCA  400

seq1  AGGACCTCTTCATAGGGAACAC-AGAGTTTTAAGAGCATCCATCACGTTT  449
      |||||||||||||||||||| |   |||||||||||||||||||||||||
seq2  AGGACCTCTTCATAGGGAACTCTTTAGTTTTAAGAGCATCCATCACGTTT  450

seq1  TGGTCCATTTGCTTTAAAATATACAGGTGCCG-TTTTATCTCCTTCTAGC  498
      |||||||||||||||||||||||||||||||| |||||||| |||||| |
seq2  TGGTCCATTTGCTTTAAAATATACAGGTGCCGTTTTTATCTTCTTCTAAC  500

seq1  ACCTGAGGTGAAAGGCCGGTCTGAGAAAGTATGGC  533
      | |||||||||||||||||||||||||||||||||
seq2  ATCTGAGGTGAAAGGCCGGTCTGAGAAAGTATGGC  535