BAC Information

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BAC

Clone NameB6Ng01-248C08
Chromosome15 (Build37)
Map Location 52,018,549 - 52,019,405
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039662, Eif3s3, LOC100039679, D530033C11Rik, Rad21, Aard, LOC100039720
Downstream geneLOC665219, Slc30a8, LOC100039748, Thrap6, LOC100039745, Ext1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248C08.bB6Ng01-248C08.g
ACCGA056296GA056297
length8421,185
definitionB6Ng01-248C08.b B6Ng01-248C08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagcattctaaattcaaaggtgaacttcaaagttatggtgaagg
tatatttgtttgccaagacatgaagatattatatttaattgaacttttgt
aaagtgatttacattttttaaatattttgacacatctactatgagtttct
atgctctagaactccaaacaaagtaaacatggttctgagcccactgaaat
tgggttaattgacaccagatatcaccagatatacttttctatcacaattc
acttttggtgatgttttcatcatttgattttcaagtcaacatgtaagact
aaactcttggaatggatgaatcctctgtaaagaggccctcaacaaaaata
actctttgtttaaaagtaaatatctcagtatttttaattttgctatacca
tgaaatgtttttttaaaaaaaaatcatatagctttaagcaattttgttgg
ctttttctgtactgcaatttctaattcctttttaataagaaagtgaaatg
tagatgagattataactattcttttttttttttttttttttttttttttt
tttttttttttttccttcccattttttattaggattttagctcttttaca
tttccaatgctataccaaaagtcccccccaaacccacccacccccattcc
cctacccgcacattccccaaaaactattcttatagcttcctggggaatag
ctttagagtttttttacaaagagtctgttttcgctagcatagagatagtc
aagataacccttaacaacgcataccaagagtttaaagtttccgtggaatt
tactccaccttaatagccaattcacagtagcaggatgttcca
gaattctggtttaaacatctgttacaatcagtggtaaatctatacaggcc
ttgggttttctttgttgacaggatatttatttctactttaatcccacggc
ttgctgctaatttatttaggtagtttatattatcttggtttgattttgtc
agattatgtgtatctaggaaaaagttctattttgtatacagaatacattt
tattgggatactttttcaaaatactccttaaggaccatttggatttcagt
agtatatattgctatgtccttcttttgcctttaattttactaatttgggt
tcttcctcacagtgccttgttagtctggtcaatgatatgtaactattgct
tatctttttctatctttgtttcattaatttccaacataatctttgttatt
ctttttatttcatttcttctgctaaaattggggttattccccctctccca
aggctttgggttacatcattaagttattcatttgagggatttctaatttt
tatatggctattaaaagctgtaaattttgcttttagaaccgtccttgctg
tgttctaaaagttttaataagttgtgttataatggttaagataaaaaact
caggtgacatcagatgctggcaagaatattgaggaagaggaacactcctc
cgttgctggtgggattgcagtctggtacaaccaccctggaaatcagtttg
gcggttcctcagaaaattagacagtactactagaggatccagcaacacca
ttcctggacatataaccagaagatgcactaacatgtaataaggacacatg
ctccactatattcatagaagcctcatttatagtaaccagaagctggaaaa
gaacccagatgtcctctcaagagaggaatggatacagaaaatggtggtac
atttacataatgggagtactaagcagctattaaacaatgaatttatgaaa
ttcttagacaaatggatggatatggagatgtcatcctgagttgaggtaac
ccaatcacaaaaggaatacacatgatatgcacctcactgattagtggata
tttagcatgatgcttggaatacccaagaatacatcacaaaacacatgaaa
ctcaagagacgaggacaaggtgtagaatctcgaacttctagacgggaaga
aatatcccattggcaggaagtttaacggagcgcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_52018549_52019405
seq2: B6Ng01-248C08.b_46_887 (reverse)

seq1  TGGAACCCATCCTTTGCCTACTGTGAATTTTGCTATTTTAATGGTTGAGG  50
      |||||  ||||||    |||||||||| || ||||||   | ||| || |
seq2  TGGAA--CATCCT---GCTACTGTGAA-TTGGCTATT---AAGGTGGA-G  40

seq1  TAATTTCCATGGAAAACTTTTAAACTCTT-GTATGC-TGTTTAAGGGTTT  98
      ||| ||||| |||||   ||||||||||| |||||| |  ||||||| ||
seq2  TAAATTCCACGGAAA--CTTTAAACTCTTGGTATGCGTTGTTAAGGG-TT  87

seq1  ATCTTTTACTTATCTCATTGCATAGC-AAAACAGACTCATTAGTAAAAAA  147
      ||| || || ||||||  ||| |||| ||||||||||| || || |||||
seq2  ATC-TTGAC-TATCTCTATGC-TAGCGAAAACAGACTC-TTTGT-AAAAA  132

seq1  AACTCAAAAGCATATACACAAGAAAACTATAAAGAATAGTTATGGGGGAG  197
      ||||| ||||| ||| | | || || |||| |||||||||| | ||||| 
seq2  AACTCTAAAGC-TATTCCCCAGGAAGCTAT-AAGAATAGTTTTTGGGGAA  180

seq1  TGGGCGGGTAGGGGAGTGGGGGTGGGTGGGTATGGGGGGGACTTTTGGTA  247
      || |||||||||||| ||||||||||||||| ||||||||||||||||||
seq2  TGTGCGGGTAGGGGAATGGGGGTGGGTGGGTTTGGGGGGGACTTTTGGTA  230

seq1  TAGCATTGGAAATGTAAATGAGCTAAATACCTAATAAAAAATGGAAAG--  295
      |||||||||||||||||| ||||||||  ||||||||||||||| |||  
seq2  TAGCATTGGAAATGTAAAAGAGCTAAAATCCTAATAAAAAATGGGAAGGA  280

seq1  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATAGTTA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATAGTTA  330

seq1  TAATCTCATCTACATTTCACTTTCTTATTAAAAAGGAATTAGAAATTGCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTCATCTACATTTCACTTTCTTATTAAAAAGGAATTAGAAATTGCA  380

seq1  GTACAGAAAAAGCCAACAAAATTGCTTAAAGCTATATGATTTTTTTTTAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGAAAAAGCCAACAAAATTGCTTAAAGCTATATGATTTTTTTTTAA  430

seq1  AAAAACATTTCATGGTATAGCAAAATTAAAAATACTGAGATATTTACTTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACATTTCATGGTATAGCAAAATTAAAAATACTGAGATATTTACTTT  480

seq1  TAAACAAAGAGTTATTTTTGTTGAGGGCCTCTTTACAGAGGATTCATCCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAAGAGTTATTTTTGTTGAGGGCCTCTTTACAGAGGATTCATCCA  530

seq1  TTCCAAGAGTTTAGTCTTACATGTTGACTTGAAAATCAAATGATGAAAAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGAGTTTAGTCTTACATGTTGACTTGAAAATCAAATGATGAAAAC  580

seq1  ATCACCAAAAGTGAATTGTGATAGAAAAGTATATCTGGTGATATCTGGTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCAAAAGTGAATTGTGATAGAAAAGTATATCTGGTGATATCTGGTG  630

seq1  TCAATTAACCCAATTTCAGTGGGCTCAGAACCATGTTTACTTTGTTTGGA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTAACCCAATTTCAGTGGGCTCAGAACCATGTTTACTTTGTTTGGA  680

seq1  GTTCTAGAGCATAGAAACTCATAGTAGATGTGTCAAAATATTTAAAAAAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAGAGCATAGAAACTCATAGTAGATGTGTCAAAATATTTAAAAAAT  730

seq1  GTAAATCACTTTACAAAAGTTCAATTAAATATAATATCTTCATGTCTTGG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATCACTTTACAAAAGTTCAATTAAATATAATATCTTCATGTCTTGG  780

seq1  CAAACAAATATACCTTCACCATAACTTTGAAGTTCACCTTTGAATTTAGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAATATACCTTCACCATAACTTTGAAGTTCACCTTTGAATTTAGA  830

seq1  ATGCTTGAATTC  857
      ||||||||||||
seq2  ATGCTTGAATTC  842